BLASTX nr result

ID: Coptis24_contig00024499 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024499
         (558 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518117.1| conserved hypothetical protein [Ricinus comm...   117   2e-24
ref|XP_002285669.1| PREDICTED: uncharacterized protein LOC100259...   111   9e-23
emb|CBI33363.3| unnamed protein product [Vitis vinifera]              110   2e-22
ref|XP_002297812.1| predicted protein [Populus trichocarpa] gi|2...   106   2e-21
ref|XP_004157670.1| PREDICTED: uncharacterized LOC101215886 [Cuc...   102   5e-20

>ref|XP_002518117.1| conserved hypothetical protein [Ricinus communis]
           gi|223542713|gb|EEF44250.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 386

 Score =  117 bits (292), Expect = 2e-24
 Identities = 68/116 (58%), Positives = 80/116 (68%), Gaps = 15/116 (12%)
 Frame = -2

Query: 305 KPKNKRVSSLRKGSEGLLAFPLRNFKEALQNLGFYSGEEDMEFSSFSSGTERAVKTWQAS 126
           K + KR  +LRKGSEG     +R  +EAL NLGFYSGEEDMEFSSFSSGTERAVKTWQAS
Sbjct: 161 KKEEKRRITLRKGSEG---DEVREMQEALLNLGFYSGEEDMEFSSFSSGTERAVKTWQAS 217

Query: 125 LGACEDGIMTAELLEKLFMAQ---------------GAVVPNFHESATGVSVASVT 3
           LGA EDGIMTAELLE+L++ Q                ++  +  ESA G +VAS+T
Sbjct: 218 LGAPEDGIMTAELLERLYVGQQNKVTGSTISIDQKESSLTVSQKESANGAAVASIT 273


>ref|XP_002285669.1| PREDICTED: uncharacterized protein LOC100259626 [Vitis vinifera]
          Length = 372

 Score =  111 bits (277), Expect = 9e-23
 Identities = 62/98 (63%), Positives = 74/98 (75%)
 Frame = -2

Query: 356 NSLLQEIGQFRRNEEMKKPKNKRVSSLRKGSEGLLAFPLRNFKEALQNLGFYSGEEDMEF 177
           +S L  + + +  +E K    K+  +LR GSEG     +R  +EALQNLGFYSGEED+EF
Sbjct: 130 SSALPMVLESKEVKEEKVGDQKKRKTLRVGSEGE---EVRAMQEALQNLGFYSGEEDVEF 186

Query: 176 SSFSSGTERAVKTWQASLGACEDGIMTAELLEKLFMAQ 63
           SSFSSGTERAVKTWQASLGA E+GIMTAELLE+LFM Q
Sbjct: 187 SSFSSGTERAVKTWQASLGAPENGIMTAELLERLFMEQ 224


>emb|CBI33363.3| unnamed protein product [Vitis vinifera]
          Length = 238

 Score =  110 bits (274), Expect = 2e-22
 Identities = 60/85 (70%), Positives = 68/85 (80%)
 Frame = -2

Query: 317 EEMKKPKNKRVSSLRKGSEGLLAFPLRNFKEALQNLGFYSGEEDMEFSSFSSGTERAVKT 138
           +E K    K+  +LR GSEG     +R  +EALQNLGFYSGEED+EFSSFSSGTERAVKT
Sbjct: 9   KEEKVGDQKKRKTLRVGSEGE---EVRAMQEALQNLGFYSGEEDVEFSSFSSGTERAVKT 65

Query: 137 WQASLGACEDGIMTAELLEKLFMAQ 63
           WQASLGA E+GIMTAELLE+LFM Q
Sbjct: 66  WQASLGAPENGIMTAELLERLFMEQ 90


>ref|XP_002297812.1| predicted protein [Populus trichocarpa] gi|222845070|gb|EEE82617.1|
           predicted protein [Populus trichocarpa]
          Length = 395

 Score =  106 bits (265), Expect = 2e-21
 Identities = 57/94 (60%), Positives = 71/94 (75%), Gaps = 2/94 (2%)
 Frame = -2

Query: 299 KNKRVSSLRKGSEGLLAFPLRNFKEALQNLGFYSGEEDMEFSSFSSGTERAVKTWQASLG 120
           + K   +LRKGSEG     ++  ++ALQ LGFYSGEEDME+SSFSSGTERAV+TWQASLG
Sbjct: 172 EKKERKTLRKGSEGE---QVKEMQDALQKLGFYSGEEDMEYSSFSSGTERAVRTWQASLG 228

Query: 119 ACEDGIMTAELLEKLFMAQ--GAVVPNFHESATG 24
           A EDGIMT ELL++L+M Q   A +P+  E+  G
Sbjct: 229 ASEDGIMTTELLKRLYMEQHIDARMPSISETQKG 262


>ref|XP_004157670.1| PREDICTED: uncharacterized LOC101215886 [Cucumis sativus]
          Length = 392

 Score =  102 bits (253), Expect = 5e-20
 Identities = 54/97 (55%), Positives = 68/97 (70%)
 Frame = -2

Query: 362 KENSLLQEIGQFRRNEEMKKPKNKRVSSLRKGSEGLLAFPLRNFKEALQNLGFYSGEEDM 183
           ++ ++++E+ +F    + +K   K   SLR GSEG     ++   EAL  LGFYSGEEDM
Sbjct: 156 EKKTIVEEVVKFSEESKAEKEVKKERKSLRTGSEGAEVLAMQ---EALMRLGFYSGEEDM 212

Query: 182 EFSSFSSGTERAVKTWQASLGACEDGIMTAELLEKLF 72
           EFSSFSSGTERAVKTWQA+ G  EDGIMT ELL+ LF
Sbjct: 213 EFSSFSSGTERAVKTWQAASGFREDGIMTTELLDILF 249