BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024495
         (440 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530699.1| PREDICTED: uncharacterized mitochondrial pro...    89   5e-32
ref|NP_085590.1| hypothetical protein ArthMp112 [Arabidopsis tha...   100   2e-19
emb|CBI19992.3| unnamed protein product [Vitis vinifera]               87   1e-15
ref|XP_003588327.1| Mitochondrial protein, putative [Medicago tr...    65   1e-15
ref|NP_671802.2| Mitovirus RNA-dependent RNA polymerase [Arabido...    82   6e-14

>ref|XP_003530699.1| PREDICTED: uncharacterized mitochondrial protein AtMg01410-like
           [Glycine max] gi|403311600|gb|AFR34348.1| hypothetical
           protein GlmaxMp34 (mitochondrion) [Glycine max]
          Length = 189

 Score = 89.4 bits (220), Expect(2) = 5e-32
 Identities = 43/74 (58%), Positives = 52/74 (70%), Gaps = 1/74 (1%)
 Frame = -3

Query: 438 WRLQVMFEIMQSLFDRSFASSV-RSALALNIFEVPFVRKKKGIFRTVSFVSGQPLGYYSS 262
           W L  +FE +  LFDRSFASSV  + L  N+FEVPFV++       VSFV+GQPLGYY  
Sbjct: 29  WPLVFLFERLALLFDRSFASSVVNTTLGTNVFEVPFVKRA---LSQVSFVTGQPLGYYGY 85

Query: 261 WPLFALSHHFVVWW 220
           WPLFA +HH +VWW
Sbjct: 86  WPLFAFTHHVLVWW 99



 Score = 73.6 bits (179), Expect(2) = 5e-32
 Identities = 38/80 (47%), Positives = 52/80 (65%)
 Frame = -1

Query: 245 YHITLWCGGEKVYPGVRFTSYGILGDDVVIADRKVAAIYVQTLECLHVGISYGKSLISNT 66
           +H+ +W   E+V PG+ F  Y ILGDDV+I D  VA  Y   L+ L V IS  KSLIS+T
Sbjct: 93  HHVLVWWAAEQVRPGILFDRYAILGDDVLITDPLVAEQYRLGLQRLGVKISTHKSLISST 152

Query: 65  GSAEFAKRLWIRGMSKDVSP 6
           G+ EFAK+  ++ M  ++SP
Sbjct: 153 GAVEFAKQFLVKDMRVNLSP 172


>ref|NP_085590.1| hypothetical protein ArthMp112 [Arabidopsis thaliana]
           gi|45477081|sp|P92567.1|M1410_ARATH RecName:
           Full=Uncharacterized mitochondrial protein AtMg01410;
           AltName: Full=ORF204 gi|1785791|emb|CAA69788.1| unnamed
           protein product [Arabidopsis thaliana]
          Length = 204

 Score =  100 bits (248), Expect = 2e-19
 Identities = 49/74 (66%), Positives = 57/74 (77%), Gaps = 1/74 (1%)
 Frame = -3

Query: 438 WRLQVMFEIMQSLFDRSFASSV-RSALALNIFEVPFVRKKKGIFRTVSFVSGQPLGYYSS 262
           W L  +FE++Q LFDRSFASSV  SA A NIFEVPFV+ K+  F  V FV+GQPLGY+ S
Sbjct: 42  WPLVFLFEVVQYLFDRSFASSVVNSAFACNIFEVPFVKLKRR-FSQVCFVAGQPLGYHGS 100

Query: 261 WPLFALSHHFVVWW 220
           WP FALSHH +VWW
Sbjct: 101 WPTFALSHHILVWW 114



 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 35/60 (58%), Positives = 45/60 (75%)
 Frame = -1

Query: 254 SLLYHITLWCGGEKVYPGVRFTSYGILGDDVVIADRKVAAIYVQTLECLHVGISYGKSLI 75
           +L +HI +W   ++V+PGVRFTSY +LGDDVVIAD++VA +Y   L  L V ISY KSLI
Sbjct: 105 ALSHHILVWWCAKQVHPGVRFTSYAVLGDDVVIADQEVAKVYESALGGLGVKISYQKSLI 164


>emb|CBI19992.3| unnamed protein product [Vitis vinifera]
          Length = 176

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
 Frame = -3

Query: 438 WRLQVMFEIMQSLFDRSFASSV-RSALALNIFEVPFVRKKKGIFRTVSFVSGQPLGYYSS 262
           W L ++FEIM  LFDRSFASSV  S LA NIFE+PFV++K   F  +SF++GQPLGYY+S
Sbjct: 55  WPLVLLFEIMCYLFDRSFASSVVNSVLAWNIFEIPFVKRK---FSHISFMAGQPLGYYTS 111

Query: 261 WPLFALS 241
           WPLFALS
Sbjct: 112 WPLFALS 118


>ref|XP_003588327.1| Mitochondrial protein, putative [Medicago truncatula]
           gi|355477375|gb|AES58578.1| Mitochondrial protein,
           putative [Medicago truncatula]
          Length = 371

 Score = 65.1 bits (157), Expect(2) = 1e-15
 Identities = 32/60 (53%), Positives = 43/60 (71%)
 Frame = -1

Query: 185 YGILGDDVVIADRKVAAIYVQTLECLHVGISYGKSLISNTGSAEFAKRLWIRGMSKDVSP 6
           Y ILGDD+ IAD KVA +Y+ TL+ L V IS  KSL+S+ G AEFAK+   + ++ D+SP
Sbjct: 108 YAILGDDICIADSKVAEVYLSTLKDLGVTISLPKSLVSDVGGAEFAKKFRCKNLTVDLSP 167



 Score = 42.7 bits (99), Expect(2) = 1e-15
 Identities = 17/21 (80%), Positives = 18/21 (85%)
 Frame = -3

Query: 291 SGQPLGYYSSWPLFALSHHFV 229
           SGQPLGY +SWPLF LSHH V
Sbjct: 87  SGQPLGYLASWPLFTLSHHLV 107


>ref|NP_671802.2| Mitovirus RNA-dependent RNA polymerase [Arabidopsis thaliana]
           gi|91805410|gb|ABE65434.1| hypothetical protein
           At2g07749 [Arabidopsis thaliana]
           gi|330250967|gb|AEC06061.1| Mitovirus RNA-dependent RNA
           polymerase [Arabidopsis thaliana]
          Length = 246

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 41/85 (48%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
 Frame = -1

Query: 254 SLLYHITLWCGGEKVYPGVR--FTSYGILGDDVVIADRKVAAIYVQTLECLHVGISYGKS 81
           +L +H  +W    + YP     F  Y +LGDD+VIADR VA  Y   L+ L V IS  KS
Sbjct: 98  ALSHHAIVWLAALRAYPHQTRPFLDYALLGDDIVIADRSVAKEYRSLLDALQVDISDAKS 157

Query: 80  LISNTGSAEFAKRLWIRGMSKDVSP 6
           ++S TG  EFAKR W++ MSKD+SP
Sbjct: 158 IVSETGCLEFAKRFWVKIMSKDLSP 182



 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 37/73 (50%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
 Frame = -3

Query: 438 WRLQVMFEIMQSLFDRSFASS-VRSALALNIFEVPFVRKKKGIFRTVSFVSGQPLGYYSS 262
           W + V++E+M  LF ++ AS  V  ALALN   +  V    G    V FV+GQPLGYY S
Sbjct: 37  WPVPVIYELMACLFGQTMASCIVNGALALNSCSLKSVT---GRHDEVVFVAGQPLGYYGS 93

Query: 261 WPLFALSHHFVVW 223
           W LFALSHH +VW
Sbjct: 94  WALFALSHHAIVW 106