BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024480
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31099.3| unnamed protein product [Vitis vinifera]              150   1e-34
ref|XP_004153172.1| PREDICTED: NADH dehydrogenase [ubiquinone] i...    98   6e-23
emb|CBI33445.3| unnamed protein product [Vitis vinifera]              105   3e-21
ref|XP_002535137.1| NADH-ubiquinone oxidoreductase fe-s protein,...   103   1e-20
ref|XP_003635139.1| PREDICTED: NADH dehydrogenase [ubiquinone] i...   101   5e-20

>emb|CBI31099.3| unnamed protein product [Vitis vinifera]
          Length = 385

 Score =  150 bits (378), Expect = 1e-34
 Identities = 72/74 (97%), Positives = 72/74 (97%)
 Frame = +2

Query: 83  GERWDRLYNRGSRCKLFLSIAGQMTTGSSVYSTSIHHFELYTEGFSVPAPSTYTAVEAPK 262
           GERWDRLYNRGSRCKLFLSIAGQMTTGSSVYSTSIHHFE YTEGF VPAPSTYTAVEAPK
Sbjct: 267 GERWDRLYNRGSRCKLFLSIAGQMTTGSSVYSTSIHHFEPYTEGFFVPAPSTYTAVEAPK 326

Query: 263 GEFGVFLVSNGSNR 304
           GEFGVFLVSNGSNR
Sbjct: 327 GEFGVFLVSNGSNR 340


>ref|XP_004153172.1| PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein
           2-like [Cucumis sativus]
           gi|449471067|ref|XP_004153199.1| PREDICTED: NADH
           dehydrogenase [ubiquinone] iron-sulfur protein 2-like
           [Cucumis sativus] gi|449471614|ref|XP_004153361.1|
           PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur
           protein 2-like [Cucumis sativus]
           gi|449472439|ref|XP_004153594.1| PREDICTED: NADH
           dehydrogenase [ubiquinone] iron-sulfur protein 2-like
           [Cucumis sativus] gi|449472462|ref|XP_004153601.1|
           PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur
           protein 2-like [Cucumis sativus]
           gi|449532418|ref|XP_004173178.1| PREDICTED: NADH
           dehydrogenase [ubiquinone] iron-sulfur protein 2-like
           [Cucumis sativus]
          Length = 137

 Score = 98.2 bits (243), Expect(2) = 6e-23
 Identities = 47/53 (88%), Positives = 49/53 (92%)
 Frame = +2

Query: 146 GQMTTGSSVYSTSIHHFELYTEGFSVPAPSTYTAVEAPKGEFGVFLVSNGSNR 304
           G++   SSVYSTSIHHFELYTEGFSVPA STYTAVEAPKGEFGVFLVSNGSNR
Sbjct: 40  GKLPRSSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNR 92



 Score = 34.3 bits (77), Expect(2) = 6e-23
 Identities = 19/26 (73%), Positives = 21/26 (80%), Gaps = 2/26 (7%)
 Frame = +1

Query: 4  LNSSLV--LVMA*SIDRKPYDGKLSR 75
          L+SS +  LVMA SIDRKPYDGKL R
Sbjct: 19 LSSSRISSLVMAQSIDRKPYDGKLPR 44


>emb|CBI33445.3| unnamed protein product [Vitis vinifera]
          Length = 130

 Score =  105 bits (263), Expect = 3e-21
 Identities = 51/53 (96%), Positives = 51/53 (96%)
 Frame = +2

Query: 146 GQMTTGSSVYSTSIHHFELYTEGFSVPAPSTYTAVEAPKGEFGVFLVSNGSNR 304
           GQMTTGSSVYSTSIHHFE YTEGF VPAPSTYTAVEAPKGEFGVFLVSNGSNR
Sbjct: 33  GQMTTGSSVYSTSIHHFEPYTEGFFVPAPSTYTAVEAPKGEFGVFLVSNGSNR 85


>ref|XP_002535137.1| NADH-ubiquinone oxidoreductase fe-s protein, putative [Ricinus
           communis] gi|223523942|gb|EEF27243.1| NADH-ubiquinone
           oxidoreductase fe-s protein, putative [Ricinus communis]
          Length = 96

 Score =  103 bits (257), Expect = 1e-20
 Identities = 50/51 (98%), Positives = 50/51 (98%)
 Frame = +2

Query: 152 MTTGSSVYSTSIHHFELYTEGFSVPAPSTYTAVEAPKGEFGVFLVSNGSNR 304
           MTTGSSVYSTSIHHFELYTEGFSVPA STYTAVEAPKGEFGVFLVSNGSNR
Sbjct: 1   MTTGSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNR 51


>ref|XP_003635139.1| PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein
           2-like [Vitis vinifera]
          Length = 96

 Score =  101 bits (252), Expect = 5e-20
 Identities = 49/51 (96%), Positives = 49/51 (96%)
 Frame = +2

Query: 152 MTTGSSVYSTSIHHFELYTEGFSVPAPSTYTAVEAPKGEFGVFLVSNGSNR 304
           MTTGSSVYSTSIHHFE YTEGF VPAPSTYTAVEAPKGEFGVFLVSNGSNR
Sbjct: 1   MTTGSSVYSTSIHHFEPYTEGFFVPAPSTYTAVEAPKGEFGVFLVSNGSNR 51