BLASTX nr result

ID: Coptis24_contig00024477 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024477
         (421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316037.1| predicted protein [Populus trichocarpa] gi|2...    99   5e-19
gb|ACH87183.1| unknown protein [Camellia sinensis]                     97   1e-18
emb|CBI30411.3| unnamed protein product [Vitis vinifera]               96   4e-18
ref|XP_002332079.1| predicted protein [Populus trichocarpa] gi|2...    93   2e-17
ref|XP_002327764.1| predicted protein [Populus trichocarpa] gi|2...    92   3e-17

>ref|XP_002316037.1| predicted protein [Populus trichocarpa] gi|222865077|gb|EEF02208.1|
           predicted protein [Populus trichocarpa]
          Length = 378

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 54/140 (38%), Positives = 80/140 (57%)
 Frame = -2

Query: 420 YHQGEDSLKSTEEFKKWYLHDLISRNETPDTSLNDLVKEIRKLEVHAREYYAESIKLTSN 241
           YH G+  L++ EE K  Y+  L+SR    + SL+D +  +R++E  AR  Y E I +T +
Sbjct: 35  YHHGKQGLETMEEHKWRYMDALLSRKPDLEASLDDCLTALREVEHRARACYEEEINVTDD 94

Query: 240 EFVRMMVFDGCFILELLYKYIERGIXXXXXXXXXXXXXXXXXXXXXDPIFGTTWMIYRLR 61
           EF++MM+ DGCFI+EL  KY  + +                     DP+F T  M++ LR
Sbjct: 95  EFLQMMLVDGCFIIELFLKYSIKSL-----------------RRRNDPVFTTPGMLFDLR 137

Query: 60  KDLVLLENQIPFIVLQTLFD 1
            +L+LLENQIP  +LQ LF+
Sbjct: 138 SNLMLLENQIPLFILQRLFE 157


>gb|ACH87183.1| unknown protein [Camellia sinensis]
          Length = 417

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 58/141 (41%), Positives = 78/141 (55%), Gaps = 1/141 (0%)
 Frame = -2

Query: 420 YHQGEDSLKSTEEFKKWYLHDLIS-RNETPDTSLNDLVKEIRKLEVHAREYYAESIKLTS 244
           YH+G+ +L+  E  K  Y H L+  +N +P+    D V  I  LE+HA ++YAE I L S
Sbjct: 55  YHRGKQNLQMMERHKLRYFHSLLQEKNLSPE----DFVYAIGSLELHACDFYAEPISLDS 110

Query: 243 NEFVRMMVFDGCFILELLYKYIERGIXXXXXXXXXXXXXXXXXXXXXDPIFGTTWMIYRL 64
           +E ++MMV DGCFI+ELL K+                          DPIF   W+  RL
Sbjct: 111 DEMIKMMVLDGCFIIELLRKF-----------------DMEFLRDENDPIFKRDWIFNRL 153

Query: 63  RKDLVLLENQIPFIVLQTLFD 1
           ++DL+L ENQIPF VL  LFD
Sbjct: 154 QRDLMLFENQIPFFVLCKLFD 174


>emb|CBI30411.3| unnamed protein product [Vitis vinifera]
          Length = 287

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 56/140 (40%), Positives = 75/140 (53%)
 Frame = -2

Query: 420 YHQGEDSLKSTEEFKKWYLHDLISRNETPDTSLNDLVKEIRKLEVHAREYYAESIKLTSN 241
           +HQG+  L + EE K  Y+  L+ R   P+ SL++  K I +LE  AR  YAE+IK    
Sbjct: 85  FHQGKRDLLAMEEHKWRYMLSLVHRTPNPEKSLDECGKSIIELEEKARGCYAENIKFNKK 144

Query: 240 EFVRMMVFDGCFILELLYKYIERGIXXXXXXXXXXXXXXXXXXXXXDPIFGTTWMIYRLR 61
           E   M++ DGCFILEL   ++ R +                     DPIF   WM+  L+
Sbjct: 145 ELAEMLLVDGCFILEL---FLRRSL--------------RDFVDKSDPIFNNAWMVPTLQ 187

Query: 60  KDLVLLENQIPFIVLQTLFD 1
            DL LLENQIPF VLQ L++
Sbjct: 188 HDLALLENQIPFFVLQNLYE 207


>ref|XP_002332079.1| predicted protein [Populus trichocarpa] gi|222831965|gb|EEE70442.1|
           predicted protein [Populus trichocarpa]
          Length = 434

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 52/138 (37%), Positives = 74/138 (53%)
 Frame = -2

Query: 420 YHQGEDSLKSTEEFKKWYLHDLISRNETPDTSLNDLVKEIRKLEVHAREYYAESIKLTSN 241
           YH+G+D LK  EE+KK YL   + R   P+ SL   V  +R LE  AR YY +++ L  +
Sbjct: 52  YHRGKDDLKMMEEYKKHYLQKFLQRR--PENSLTSYVAAMRGLEAQARRYYDQTVSLGED 109

Query: 240 EFVRMMVFDGCFILELLYKYIERGIXXXXXXXXXXXXXXXXXXXXXDPIFGTTWMIYRLR 61
            FV M++ DGCFI+EL+ K    G+                     DP+ G   ++ R+ 
Sbjct: 110 AFVEMLLLDGCFIVELICKLATSGL---------------QQGDQNDPVIGNLLILSRIS 154

Query: 60  KDLVLLENQIPFIVLQTL 7
            D++LLENQ+PF VL  L
Sbjct: 155 YDILLLENQLPFCVLLKL 172


>ref|XP_002327764.1| predicted protein [Populus trichocarpa] gi|222836849|gb|EEE75242.1|
           predicted protein [Populus trichocarpa]
          Length = 419

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 56/140 (40%), Positives = 72/140 (51%)
 Frame = -2

Query: 420 YHQGEDSLKSTEEFKKWYLHDLISRNETPDTSLNDLVKEIRKLEVHAREYYAESIKLTSN 241
           YH GE+ LK  EE K  YL  ++SR +     L  L+K I+ LE  ARE Y++ I   ++
Sbjct: 48  YHHGEEHLKMIEEHKWRYLGSILSRTQNKGLDLEVLLKAIQPLEKKARECYSQIIHFDTD 107

Query: 240 EFVRMMVFDGCFILELLYKYIERGIXXXXXXXXXXXXXXXXXXXXXDPIFGTTWMIYRLR 61
           EF+ MMV DGCFI+EL  K                           DPI    W+I    
Sbjct: 108 EFIEMMVVDGCFIIELFRKV-----------------GNVVEFEVDDPIVTMAWIIPFFY 150

Query: 60  KDLVLLENQIPFIVLQTLFD 1
           +DL+ LENQIPF VL+ LFD
Sbjct: 151 RDLLRLENQIPFFVLECLFD 170