BLASTX nr result

ID: Coptis24_contig00024468 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024468
         (968 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525861.1| caspase, putative [Ricinus communis] gi|2235...   410   e-112
ref|XP_002323764.1| predicted protein [Populus trichocarpa] gi|2...   400   e-109
emb|CBI16704.3| unnamed protein product [Vitis vinifera]              388   e-105
ref|XP_002268524.1| PREDICTED: metacaspase-1-like [Vitis vinifera]    388   e-105
ref|XP_004157687.1| PREDICTED: metacaspase-1-like [Cucumis sativus]   387   e-105

>ref|XP_002525861.1| caspase, putative [Ricinus communis] gi|223534866|gb|EEF36555.1|
           caspase, putative [Ricinus communis]
          Length = 378

 Score =  410 bits (1054), Expect = e-112
 Identities = 197/288 (68%), Positives = 243/288 (84%), Gaps = 2/288 (0%)
 Frame = -3

Query: 864 HGRRRAVLCGLCYRTKRYELKGSINDVHCMKYFLMEKLGFPNDTILILTENERDPYRIPT 685
           HGR+RAVLCG+ YR K Y++KGSINDV+CM+YFL+EKLGFPND+ILILTE+E  P +IPT
Sbjct: 93  HGRKRAVLCGVSYRGKSYKIKGSINDVNCMRYFLVEKLGFPNDSILILTEDETSPVKIPT 152

Query: 684 KQNIRMALQWLVQGCRSGDSLVFHYSGHGSQQPNINGDEIDGYDETLCPLDYETEGMIVD 505
           K+N+R+AL+WLVQGC++GDSLVFH+SGHGSQ P+ + DEIDG+DETLCPLDYETEGMIVD
Sbjct: 153 KENMRLALRWLVQGCQAGDSLVFHFSGHGSQVPDSDMDEIDGFDETLCPLDYETEGMIVD 212

Query: 504 DEINATIVRPLPKGVTLHAIIDACHSGTVLDLPYLCRMTRDQNGRYLWENHSPRSGAYKG 325
           DEIN TIVRPLPKG TLHAIID+C+SGT+LDLP++C+M R+  G Y WE        YKG
Sbjct: 213 DEINETIVRPLPKGATLHAIIDSCYSGTILDLPFVCKMNRE--GYYTWEEQKCPQDIYKG 270

Query: 324 TSGGLAVSFSACDDHQTSADTSAFSGDTMTGAMTYSFIHAAQSAPGLTYGNLLNAMRLAI 145
           TSGGLA+ FSAC+D+Q S DT+A +G+  TGA+TYSFI A ++ PGLTYG LLNAMR AI
Sbjct: 271 TSGGLALCFSACNDNQISVDTNALAGNAATGALTYSFIQAVENEPGLTYGRLLNAMRQAI 330

Query: 144 REANI-GIRCNGPISSLL-RKVFFTGLSQEPQLSSAEKFDIYTKQFVL 7
           R A   G+R +GPI+SL+ R +F T ++QEPQLSS++KFDIY KQF+L
Sbjct: 331 RGAKTGGLRLSGPIASLINRALFNTEITQEPQLSSSDKFDIYAKQFLL 378


>ref|XP_002323764.1| predicted protein [Populus trichocarpa] gi|222866766|gb|EEF03897.1|
           predicted protein [Populus trichocarpa]
          Length = 384

 Score =  400 bits (1027), Expect = e-109
 Identities = 193/288 (67%), Positives = 239/288 (82%), Gaps = 2/288 (0%)
 Frame = -3

Query: 864 HGRRRAVLCGLCYRTKRYELKGSINDVHCMKYFLMEKLGFPNDTILILTENERDPYRIPT 685
           HGR+RA+LCG+ YR K Y++KGSINDV CM+YFL+EK GFPND+IL+LTE+E +P +IPT
Sbjct: 99  HGRKRALLCGVSYRGKSYKIKGSINDVKCMRYFLVEKFGFPNDSILMLTEDETNPLQIPT 158

Query: 684 KQNIRMALQWLVQGCRSGDSLVFHYSGHGSQQPNINGDEIDGYDETLCPLDYETEGMIVD 505
           K+NIR+AL+WLVQGC+ GDSLVFH+SGHGS+Q + + DE+DG+DETLCPLDYET+GMIVD
Sbjct: 159 KENIRLALRWLVQGCQPGDSLVFHFSGHGSKQLDYDMDEVDGFDETLCPLDYETQGMIVD 218

Query: 504 DEINATIVRPLPKGVTLHAIIDACHSGTVLDLPYLCRMTRDQNGRYLWENHSPRSGAYKG 325
           DEIN TIVRPLP+GVTLHAIIDAC+S T+LDLP++CRM R+  G Y WE+ +    A KG
Sbjct: 219 DEINETIVRPLPQGVTLHAIIDACYSQTMLDLPFVCRMNRE--GYYTWEDQTLSPYACKG 276

Query: 324 TSGGLAVSFSACDDHQTSADTSAFSGDTMTGAMTYSFIHAAQSAPGLTYGNLLNAMRLAI 145
           TSGGLA+  SACDD+QTS DT+A +G+  TGA+TY FI A Q+ PGLTYG LLN+MR  I
Sbjct: 277 TSGGLALCISACDDNQTSVDTTALAGNVSTGALTYCFIQAVQNEPGLTYGRLLNSMRQVI 336

Query: 144 REANI-GIRCNGPISSLLRKVFF-TGLSQEPQLSSAEKFDIYTKQFVL 7
           R A   G+R NGPI+SL+ K  F T ++QEPQLSS+E FDIY KQF+L
Sbjct: 337 RGAKTGGLRLNGPIASLVNKALFNTEITQEPQLSSSETFDIYAKQFIL 384


>emb|CBI16704.3| unnamed protein product [Vitis vinifera]
          Length = 411

 Score =  388 bits (997), Expect = e-105
 Identities = 188/294 (63%), Positives = 227/294 (77%), Gaps = 8/294 (2%)
 Frame = -3

Query: 864 HGRRRAVLCGLCYRTKRYELKGSINDVHCMKYFLMEKLGFPNDTILILTENERDPYRIPT 685
           HGR++A++CG+ YR  R+ELKG IND  CMKY LM K  FP  +IL+LTE E DPYRIP 
Sbjct: 120 HGRKKALICGISYRYSRHELKGCINDAKCMKYLLMNKFQFPESSILMLTEEETDPYRIPN 179

Query: 684 KQNIRMALQWLVQGCRSGDSLVFHYSGHGSQQPNINGDEIDGYDETLCPLDYETEGMIVD 505
           KQN+RMAL WLVQGC+ GDSL+FHYSGHGS+Q N NGDE+DGYDETLCPLD+ET+GMIVD
Sbjct: 180 KQNLRMALYWLVQGCQPGDSLLFHYSGHGSRQRNYNGDEVDGYDETLCPLDFETQGMIVD 239

Query: 504 DEINATIVRPLPKGVTLHAIIDACHSGTVLDLPYLCRMTRDQNGRYLWENHSPRSGAYKG 325
           DEINATIVRPLP GV LHAIIDACHSGT+LDLP+LCRM+R  +G+Y+WE+H P+SG +KG
Sbjct: 240 DEINATIVRPLPHGVKLHAIIDACHSGTILDLPFLCRMSR--SGQYIWEDHRPQSGVWKG 297

Query: 324 TSGGLAVSFSACDDHQTSADTSAFSGDTMTGAMTYSFIHAAQSAPGLTYGNLLNAMRLAI 145
           T+GG  +SFS CDD QTSADTSA S  T TGAMT+ FI A +     TYG++LNAMR AI
Sbjct: 298 TNGGEVISFSGCDDDQTSADTSALSQITSTGAMTFCFIQAIERGHAATYGSVLNAMRSAI 357

Query: 144 REANIGI---RCNGPISSLLRKVF-----FTGLSQEPQLSSAEKFDIYTKQFVL 7
           R A  G+      G ++SL+  +        GL QEPQL++ + FD+YTK F L
Sbjct: 358 RSAGNGVGGGGGGGAVTSLISMLLTGGSVSGGLRQEPQLTACQPFDVYTKPFSL 411


>ref|XP_002268524.1| PREDICTED: metacaspase-1-like [Vitis vinifera]
          Length = 370

 Score =  388 bits (997), Expect = e-105
 Identities = 188/294 (63%), Positives = 227/294 (77%), Gaps = 8/294 (2%)
 Frame = -3

Query: 864 HGRRRAVLCGLCYRTKRYELKGSINDVHCMKYFLMEKLGFPNDTILILTENERDPYRIPT 685
           HGR++A++CG+ YR  R+ELKG IND  CMKY LM K  FP  +IL+LTE E DPYRIP 
Sbjct: 79  HGRKKALICGISYRYSRHELKGCINDAKCMKYLLMNKFQFPESSILMLTEEETDPYRIPN 138

Query: 684 KQNIRMALQWLVQGCRSGDSLVFHYSGHGSQQPNINGDEIDGYDETLCPLDYETEGMIVD 505
           KQN+RMAL WLVQGC+ GDSL+FHYSGHGS+Q N NGDE+DGYDETLCPLD+ET+GMIVD
Sbjct: 139 KQNLRMALYWLVQGCQPGDSLLFHYSGHGSRQRNYNGDEVDGYDETLCPLDFETQGMIVD 198

Query: 504 DEINATIVRPLPKGVTLHAIIDACHSGTVLDLPYLCRMTRDQNGRYLWENHSPRSGAYKG 325
           DEINATIVRPLP GV LHAIIDACHSGT+LDLP+LCRM+R  +G+Y+WE+H P+SG +KG
Sbjct: 199 DEINATIVRPLPHGVKLHAIIDACHSGTILDLPFLCRMSR--SGQYIWEDHRPQSGVWKG 256

Query: 324 TSGGLAVSFSACDDHQTSADTSAFSGDTMTGAMTYSFIHAAQSAPGLTYGNLLNAMRLAI 145
           T+GG  +SFS CDD QTSADTSA S  T TGAMT+ FI A +     TYG++LNAMR AI
Sbjct: 257 TNGGEVISFSGCDDDQTSADTSALSQITSTGAMTFCFIQAIERGHAATYGSVLNAMRSAI 316

Query: 144 REANIGI---RCNGPISSLLRKVF-----FTGLSQEPQLSSAEKFDIYTKQFVL 7
           R A  G+      G ++SL+  +        GL QEPQL++ + FD+YTK F L
Sbjct: 317 RSAGNGVGGGGGGGAVTSLISMLLTGGSVSGGLRQEPQLTACQPFDVYTKPFSL 370


>ref|XP_004157687.1| PREDICTED: metacaspase-1-like [Cucumis sativus]
          Length = 367

 Score =  387 bits (995), Expect = e-105
 Identities = 196/319 (61%), Positives = 233/319 (73%), Gaps = 6/319 (1%)
 Frame = -3

Query: 945 PGTTTAPSYANYAYNXXXXXXXXXXXVHGRRRAVLCGLCYRTKRYELKGSINDVHCMKYF 766
           P    APS  N+A              HGR+RAV+CG+ YR  R+ELKG +ND  CM+Y 
Sbjct: 57  PAPAPAPSPYNHA------PPGAPAHPHGRKRAVICGVSYRYSRHELKGCLNDAKCMRYL 110

Query: 765 LMEKLGFPNDTILILTENERDPYRIPTKQNIRMALQWLVQGCRSGDSLVFHYSGHGSQQP 586
           L+ K  FP D+IL+LTE E DPYRIP K NIRMAL WLVQGC+ GDSLVFHYSGHGS Q 
Sbjct: 111 LINKFRFPEDSILMLTEEETDPYRIPYKNNIRMALFWLVQGCQPGDSLVFHYSGHGSHQR 170

Query: 585 NINGDEIDGYDETLCPLDYETEGMIVDDEINATIVRPLPKGVTLHAIIDACHSGTVLDLP 406
           N NGDE+DGYDETLCPLD+ET+GMIVDDEINA IVRPLP+GV LHA IDACHSGTVLDLP
Sbjct: 171 NYNGDEVDGYDETLCPLDFETQGMIVDDEINAAIVRPLPQGVKLHAFIDACHSGTVLDLP 230

Query: 405 YLCRMTRDQNGRYLWENHSPRSGAYKGTSGGLAVSFSACDDHQTSADTSAFSGDTMTGAM 226
           +LCRM R  +G+Y+WE+H PRSG +KGTSGG A+SFS CDD++TSADTSA S  T TGAM
Sbjct: 231 FLCRMGR--SGQYMWEDHRPRSGVWKGTSGGEAISFSGCDDNETSADTSALSKITSTGAM 288

Query: 225 TYSFIHAAQSAPGLTYGNLLNAMRLAIREA-NIGIRCNGPISSLLRKVF-----FTGLSQ 64
           T+ FI A +   G TYG++LN+MR AIR A   G    G ++SL+  +        GL Q
Sbjct: 289 TFCFIQAIERGHGTTYGSILNSMRNAIRNAGGSGDIGGGAMTSLVTMLLSGGSALGGLRQ 348

Query: 63  EPQLSSAEKFDIYTKQFVL 7
           EPQL++ + FD+YTK F L
Sbjct: 349 EPQLTACQPFDVYTKPFSL 367


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