BLASTX nr result
ID: Coptis24_contig00024465
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00024465
(664 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002330744.1| predicted protein [Populus trichocarpa] gi|2... 176 3e-42
ref|NP_001031674.1| protein OSB2 [Arabidopsis thaliana] gi|33265... 160 3e-37
ref|NP_567593.1| protein OSB2 [Arabidopsis thaliana] gi|25951776... 160 3e-37
dbj|BAC42861.1| unknown protein [Arabidopsis thaliana] 158 8e-37
ref|XP_002869952.1| hypothetical protein ARALYDRAFT_492872 [Arab... 157 2e-36
>ref|XP_002330744.1| predicted protein [Populus trichocarpa] gi|222872520|gb|EEF09651.1|
predicted protein [Populus trichocarpa]
Length = 354
Score = 176 bits (447), Expect = 3e-42
Identities = 103/225 (45%), Positives = 135/225 (60%), Gaps = 5/225 (2%)
Frame = -2
Query: 663 NWPRPSEIPWQGKVANVVNLIGTVSMPVQFQVSA-DGKSWAGTILTQESSSSDSLLWIPI 487
++PRP EIP+Q KVAN +NLIG + MP+Q QVS+ D K A T++TQE S L IPI
Sbjct: 67 DFPRPKEIPFQAKVANSINLIGYIDMPIQTQVSSPDEKFRAATVITQEPSYHSPALRIPI 126
Query: 486 IFEGDLAHIAACHLKEKDFVHVSGQLAGDPPQFTMEKSRSSSIQVMVNGINFVEESPQRK 307
IFEGDLAHIAA HLK+ DFV++ GQL+ DPP F E + +QV+VN INF+E S Q K
Sbjct: 127 IFEGDLAHIAASHLKKGDFVYIDGQLSTDPPPFP-EMQDQTQVQVLVNSINFIEGSFQVK 185
Query: 306 ESHASYKQNEQAXXXXXXXXXXXSMPEDKNDSTTTEHLWTDLLENPHEWWDNRLNKNN-- 133
+S + +P D +D + + WTDLLENP++WWD R +K +
Sbjct: 186 KSILEQQ---------------LEVPLD-DDGESGSNSWTDLLENPNQWWDYRSSKRSGL 229
Query: 132 --LKGADFKHKVKGEMLWLDESTPGWVVSKLESLNFINKTVQKSQ 4
K DFKHK + +WL P W+ S LE + F KT +Q
Sbjct: 230 VKPKHPDFKHKNNNQSVWL-TGAPSWIFSGLEKVKFDVKTALPTQ 273
Score = 76.6 bits (187), Expect = 4e-12
Identities = 33/52 (63%), Positives = 38/52 (73%)
Frame = -2
Query: 201 EHLWTDLLENPHEWWDNRLNKNNLKGADFKHKVKGEMLWLDESTPGWVVSKL 46
E W DL+ENPH+WWDNR++K N K DFKHK GE LWLD S P WV+ KL
Sbjct: 280 EECWKDLVENPHKWWDNRVDKKNPKSPDFKHKETGEGLWLDTS-PAWVLPKL 330
>ref|NP_001031674.1| protein OSB2 [Arabidopsis thaliana] gi|332658861|gb|AEE84261.1|
protein OSB2 [Arabidopsis thaliana]
Length = 371
Score = 160 bits (404), Expect = 3e-37
Identities = 91/216 (42%), Positives = 129/216 (59%), Gaps = 7/216 (3%)
Frame = -2
Query: 657 PRPSEIPWQGKVANVVNLIGTVSMPVQFQVSADGKSWAGTILTQESSSSDSLLWIPIIFE 478
PRP+EI ++ +VAN VNLIG V PVQF+ S+DGK WAGT+++Q S+S S WIPIIFE
Sbjct: 86 PRPNEIAYESEVANWVNLIGFVDQPVQFEASSDGKFWAGTVISQRSASDSSGFWIPIIFE 145
Query: 477 GDLAHIAACHLKEKDFVHVSGQLAGDPPQFTMEKSRSSSIQVMVNGINFVE---ESPQRK 307
GDLA AA ++ + D +HVSG+L D P M ++ +++QV+V +NF++ SP
Sbjct: 146 GDLAKTAARYVSKDDQIHVSGKLFIDSPPPNMTYAQ-ANVQVLVQNLNFIQPMSPSPSPF 204
Query: 306 ESHASYKQNEQAXXXXXXXXXXXSMPEDKNDSTTTEHLWTDLLENPHEWWDNRLNKNN-- 133
+S ++ E + ++ +DS W L+ENP EWWD+R NK N
Sbjct: 205 MVMSSSEKEESGIKKQPGIAKQDIVIDEASDS------WNHLIENPKEWWDHRENKVNGL 258
Query: 132 --LKGADFKHKVKGEMLWLDESTPGWVVSKLESLNF 31
+ DFK K LWL+++ P WV+ KLE L F
Sbjct: 259 VKPRHPDFKSKDSSFSLWLNKA-PNWVLPKLEGLEF 293
Score = 73.2 bits (178), Expect = 4e-11
Identities = 31/52 (59%), Positives = 38/52 (73%)
Frame = -2
Query: 201 EHLWTDLLENPHEWWDNRLNKNNLKGADFKHKVKGEMLWLDESTPGWVVSKL 46
E W DL++NP +WWDNR++K N K DFKHK GE LWL+ES P WV+ KL
Sbjct: 309 EESWKDLVQNPDKWWDNRIDKRNAKAPDFKHKETGEALWLNES-PTWVLPKL 359
>ref|NP_567593.1| protein OSB2 [Arabidopsis thaliana]
gi|259517764|sp|Q8GXH3.2|OSB2_ARATH RecName:
Full=Protein OSB2, chloroplastic; AltName:
Full=Organellar single-stranded DNA-binding protein 2;
AltName: Full=Protein FLORAL ABSCISSION ASSOCIATED;
AltName: Full=Protein PLASTID TRANSCRIPTIONALLY ACTIVE
9; Flags: Precursor gi|2827655|emb|CAA16609.1|
hypothetical protein [Arabidopsis thaliana]
gi|7268796|emb|CAB79001.1| hypothetical protein
[Arabidopsis thaliana] gi|111074390|gb|ABH04568.1|
At4g20010 [Arabidopsis thaliana]
gi|332658860|gb|AEE84260.1| protein OSB2 [Arabidopsis
thaliana]
Length = 371
Score = 160 bits (404), Expect = 3e-37
Identities = 91/216 (42%), Positives = 129/216 (59%), Gaps = 7/216 (3%)
Frame = -2
Query: 657 PRPSEIPWQGKVANVVNLIGTVSMPVQFQVSADGKSWAGTILTQESSSSDSLLWIPIIFE 478
PRP+EI ++ +VAN VNLIG V PVQF+ S+DGK WAGT+++Q S+S S WIPIIFE
Sbjct: 86 PRPNEIAYESEVANWVNLIGFVDQPVQFEASSDGKFWAGTVISQRSASDSSGFWIPIIFE 145
Query: 477 GDLAHIAACHLKEKDFVHVSGQLAGDPPQFTMEKSRSSSIQVMVNGINFVE---ESPQRK 307
GDLA AA ++ + D +HVSG+L D P M ++ +++QV+V +NF++ SP
Sbjct: 146 GDLAKTAARYVSKDDQIHVSGKLFIDSPPPNMTYAQ-ANVQVLVQNLNFIQPMSPSPSPF 204
Query: 306 ESHASYKQNEQAXXXXXXXXXXXSMPEDKNDSTTTEHLWTDLLENPHEWWDNRLNKNN-- 133
+S ++ E + ++ +DS W L+ENP EWWD+R NK N
Sbjct: 205 MVMSSSEKEESGIKKQPARAKQDIVIDEASDS------WNHLIENPKEWWDHRENKVNGL 258
Query: 132 --LKGADFKHKVKGEMLWLDESTPGWVVSKLESLNF 31
+ DFK K LWL+++ P WV+ KLE L F
Sbjct: 259 VKPRHPDFKSKDSSFSLWLNKA-PNWVLPKLEGLEF 293
Score = 73.2 bits (178), Expect = 4e-11
Identities = 31/52 (59%), Positives = 38/52 (73%)
Frame = -2
Query: 201 EHLWTDLLENPHEWWDNRLNKNNLKGADFKHKVKGEMLWLDESTPGWVVSKL 46
E W DL++NP +WWDNR++K N K DFKHK GE LWL+ES P WV+ KL
Sbjct: 309 EESWKDLVQNPDKWWDNRIDKRNAKAPDFKHKETGEALWLNES-PTWVLPKL 359
>dbj|BAC42861.1| unknown protein [Arabidopsis thaliana]
Length = 371
Score = 158 bits (400), Expect = 8e-37
Identities = 90/216 (41%), Positives = 128/216 (59%), Gaps = 7/216 (3%)
Frame = -2
Query: 657 PRPSEIPWQGKVANVVNLIGTVSMPVQFQVSADGKSWAGTILTQESSSSDSLLWIPIIFE 478
PRP+EI ++ + AN VNLIG V PVQF+ S+DGK WAGT+++Q S+S S WIPIIFE
Sbjct: 86 PRPNEIAYESEAANWVNLIGFVDQPVQFEASSDGKFWAGTVISQRSASDSSGFWIPIIFE 145
Query: 477 GDLAHIAACHLKEKDFVHVSGQLAGDPPQFTMEKSRSSSIQVMVNGINFVE---ESPQRK 307
GDLA AA ++ + D +HVSG+L D P M ++ +++QV+V +NF++ SP
Sbjct: 146 GDLAKTAARYVSKDDQIHVSGKLFIDSPPPNMTYAQ-ANVQVLVQNLNFIQPMSPSPSPF 204
Query: 306 ESHASYKQNEQAXXXXXXXXXXXSMPEDKNDSTTTEHLWTDLLENPHEWWDNRLNKNN-- 133
+S ++ E + ++ +DS W L+ENP EWWD+R NK N
Sbjct: 205 MVMSSSEKEESGIKKQPARAKQDIVIDEASDS------WNHLIENPKEWWDHRENKVNGL 258
Query: 132 --LKGADFKHKVKGEMLWLDESTPGWVVSKLESLNF 31
+ DFK K LWL+++ P WV+ KLE L F
Sbjct: 259 VKPRHPDFKSKDSSFSLWLNKA-PNWVLPKLEGLEF 293
Score = 73.2 bits (178), Expect = 4e-11
Identities = 31/52 (59%), Positives = 38/52 (73%)
Frame = -2
Query: 201 EHLWTDLLENPHEWWDNRLNKNNLKGADFKHKVKGEMLWLDESTPGWVVSKL 46
E W DL++NP +WWDNR++K N K DFKHK GE LWL+ES P WV+ KL
Sbjct: 309 EESWKDLVQNPDKWWDNRIDKRNAKAPDFKHKETGEALWLNES-PTWVLPKL 359
>ref|XP_002869952.1| hypothetical protein ARALYDRAFT_492872 [Arabidopsis lyrata subsp.
lyrata] gi|297315788|gb|EFH46211.1| hypothetical protein
ARALYDRAFT_492872 [Arabidopsis lyrata subsp. lyrata]
Length = 365
Score = 157 bits (396), Expect = 2e-36
Identities = 90/215 (41%), Positives = 128/215 (59%), Gaps = 7/215 (3%)
Frame = -2
Query: 654 RPSEIPWQGKVANVVNLIGTVSMPVQFQVSADGKSWAGTILTQESSSSDSLLWIPIIFEG 475
RP+EI ++ +VAN VNLIG V PVQF+ S+DGK WAGT+++Q S+S S WIPIIFEG
Sbjct: 82 RPNEIAYETEVANWVNLIGFVDQPVQFEASSDGKFWAGTVISQRSASDSSGFWIPIIFEG 141
Query: 474 DLAHIAACHLKEKDFVHVSGQLAGDPPQFTMEKSRSSSIQVMVNGINFVE---ESPQRKE 304
DLA AA ++ + D +HVSG+L D P M ++ +++QV+V +NF++ SP
Sbjct: 142 DLAKTAAQNINKDDQIHVSGKLFIDSPPPNMTYAQ-ANVQVLVQNLNFIQPMSPSPSPLM 200
Query: 303 SHASYKQNEQAXXXXXXXXXXXSMPEDKNDSTTTEHLWTDLLENPHEWWDNRLNKNN--- 133
+S ++ E + ++ +DS W L+ENP EWWD+R NK N
Sbjct: 201 VMSSSEKEESGIKKQPGIAKKDIVIDEASDS------WNHLIENPKEWWDHRENKVNGLV 254
Query: 132 -LKGADFKHKVKGEMLWLDESTPGWVVSKLESLNF 31
+ DFK K LWL+++ P WV+ KLE L F
Sbjct: 255 KPRHPDFKSKDSSLSLWLNKA-PNWVLPKLEGLKF 288
Score = 73.2 bits (178), Expect = 4e-11
Identities = 31/52 (59%), Positives = 38/52 (73%)
Frame = -2
Query: 201 EHLWTDLLENPHEWWDNRLNKNNLKGADFKHKVKGEMLWLDESTPGWVVSKL 46
E W DL++NP +WWDNR++K N K DFKHK GE LWL+ES P WV+ KL
Sbjct: 304 EESWKDLVQNPDKWWDNRIDKRNAKAPDFKHKETGEALWLNES-PTWVLPKL 354