BLASTX nr result

ID: Coptis24_contig00024460 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024460
         (630 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB65156.1| basic cellulase [Citrus sinensis]                      228   2e-74
gb|AAT75042.1| Cel9B [Populus tremula x Populus tremuloides]          222   2e-72
ref|XP_002329161.1| predicted protein [Populus trichocarpa] gi|2...   221   6e-72
ref|XP_002890540.1| glycosyl hydrolase family 9 protein [Arabido...   214   2e-70
ref|XP_002269875.2| PREDICTED: endoglucanase 9-like [Vitis vinif...   209   4e-70

>gb|AAB65156.1| basic cellulase [Citrus sinensis]
          Length = 488

 Score =  228 bits (581), Expect(2) = 2e-74
 Identities = 106/118 (89%), Positives = 111/118 (94%)
 Frame = -2

Query: 539 GISDGLAAHVDLRGGYYDAGDNVKFNFPMAFTTTMLSWSTLEYGERMGSQLGSARGAIRW 360
           G+SDGL AHVDL GGYYDAGDNVKFNFPMAFTTTMLSWSTLEYG++MG +L +AR AIRW
Sbjct: 60  GLSDGLFAHVDLTGGYYDAGDNVKFNFPMAFTTTMLSWSTLEYGKKMGPELQNARAAIRW 119

Query: 359 ATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSVGNPGSDVAGET 186
           ATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVS  NPGSDVAGET
Sbjct: 120 ATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGSDVAGET 177



 Score = 77.0 bits (188), Expect(2) = 2e-74
 Identities = 36/55 (65%), Positives = 41/55 (74%)
 Frame = -1

Query: 183 AAASMVFRKVDPXXXXXXXXXXXKVMQFALQYKGAYSDSLGLAMCPFYCSYSGYK 19
           AAAS+VFRK DP            V+QFA+QY+GAYSDSLG A+CPFYCSYSGYK
Sbjct: 182 AAASLVFRKGDPRYASLLLRTAKNVLQFAMQYRGAYSDSLGSAVCPFYCSYSGYK 236


>gb|AAT75042.1| Cel9B [Populus tremula x Populus tremuloides]
          Length = 486

 Score =  222 bits (566), Expect(2) = 2e-72
 Identities = 103/118 (87%), Positives = 110/118 (93%)
 Frame = -2

Query: 539 GISDGLAAHVDLRGGYYDAGDNVKFNFPMAFTTTMLSWSTLEYGERMGSQLGSARGAIRW 360
           G+SDGL AHVDL GGYYDAGDNVKFNFPMAFTTTMLSWSTLEYG+RMG +L +AR AIRW
Sbjct: 59  GLSDGLFAHVDLTGGYYDAGDNVKFNFPMAFTTTMLSWSTLEYGKRMGPELPNARAAIRW 118

Query: 359 ATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSVGNPGSDVAGET 186
           ATDYLLKCATATPGKLYVGVGDPN DHKCWERPEDMDTVR+V+SVS  +PGSDVAGET
Sbjct: 119 ATDYLLKCATATPGKLYVGVGDPNVDHKCWERPEDMDTVRTVFSVSARSPGSDVAGET 176



 Score = 76.3 bits (186), Expect(2) = 2e-72
 Identities = 38/55 (69%), Positives = 41/55 (74%)
 Frame = -1

Query: 183 AAASMVFRKVDPXXXXXXXXXXXKVMQFALQYKGAYSDSLGLAMCPFYCSYSGYK 19
           AAASMVFRKVD            KV QFA+QY+GAYSDSLG A+CPFYCSYSGYK
Sbjct: 181 AAASMVFRKVDRKYSALLLRTARKVFQFAMQYQGAYSDSLGSAVCPFYCSYSGYK 235


>ref|XP_002329161.1| predicted protein [Populus trichocarpa] gi|222870942|gb|EEF08073.1|
           predicted protein [Populus trichocarpa]
           gi|347466581|gb|AEO97203.1| endo-1,4-beta-glucanase
           [Populus trichocarpa] gi|347466635|gb|AEO97230.1|
           endo-1,4-beta-glucanase [Populus trichocarpa]
           gi|429326594|gb|AFZ78637.1| korrigan [Populus tomentosa]
          Length = 481

 Score =  221 bits (562), Expect(2) = 6e-72
 Identities = 102/118 (86%), Positives = 109/118 (92%)
 Frame = -2

Query: 539 GISDGLAAHVDLRGGYYDAGDNVKFNFPMAFTTTMLSWSTLEYGERMGSQLGSARGAIRW 360
           G+SDGL AHVDL GGYYDAGDNVKFNFPMAFTTTMLSWSTLEYG+RMG +L +AR AIRW
Sbjct: 59  GLSDGLFAHVDLTGGYYDAGDNVKFNFPMAFTTTMLSWSTLEYGKRMGPELPNARAAIRW 118

Query: 359 ATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSVGNPGSDVAGET 186
           ATDYLLKCATATPGKLYVGVGDPN DHKCWERPEDMDT R+V+SVS  +PGSDVAGET
Sbjct: 119 ATDYLLKCATATPGKLYVGVGDPNVDHKCWERPEDMDTARTVFSVSARSPGSDVAGET 176



 Score = 76.3 bits (186), Expect(2) = 6e-72
 Identities = 38/55 (69%), Positives = 41/55 (74%)
 Frame = -1

Query: 183 AAASMVFRKVDPXXXXXXXXXXXKVMQFALQYKGAYSDSLGLAMCPFYCSYSGYK 19
           AAASMVFRKVD            KV QFA+QY+GAYSDSLG A+CPFYCSYSGYK
Sbjct: 181 AAASMVFRKVDRKYSALLLRTARKVFQFAMQYQGAYSDSLGSAVCPFYCSYSGYK 235


>ref|XP_002890540.1| glycosyl hydrolase family 9 protein [Arabidopsis lyrata subsp.
           lyrata] gi|297336382|gb|EFH66799.1| glycosyl hydrolase
           family 9 protein [Arabidopsis lyrata subsp. lyrata]
          Length = 485

 Score =  214 bits (546), Expect(2) = 2e-70
 Identities = 99/118 (83%), Positives = 108/118 (91%)
 Frame = -2

Query: 539 GISDGLAAHVDLRGGYYDAGDNVKFNFPMAFTTTMLSWSTLEYGERMGSQLGSARGAIRW 360
           G+SDG +AHVDL GGYYDAGDNVKFNFPMAFTTTMLSWS+LEYG++MGS+L ++R AIRW
Sbjct: 58  GLSDGSSAHVDLTGGYYDAGDNVKFNFPMAFTTTMLSWSSLEYGKKMGSELQNSRVAIRW 117

Query: 359 ATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSVGNPGSDVAGET 186
           ATDYLLKCA ATPGKLYVGVGDPN DHKCWERPEDMDT R+VYSVS  NPGSDVA ET
Sbjct: 118 ATDYLLKCARATPGKLYVGVGDPNGDHKCWERPEDMDTPRTVYSVSSSNPGSDVAAET 175



 Score = 77.4 bits (189), Expect(2) = 2e-70
 Identities = 37/55 (67%), Positives = 42/55 (76%)
 Frame = -1

Query: 183 AAASMVFRKVDPXXXXXXXXXXXKVMQFALQYKGAYSDSLGLAMCPFYCSYSGYK 19
           AA+SMVFRKVDP           KVMQFA+QY+GAYSDSL  ++CPFYCSYSGYK
Sbjct: 180 AASSMVFRKVDPKYSRLLLATAKKVMQFAIQYRGAYSDSLSSSVCPFYCSYSGYK 234


>ref|XP_002269875.2| PREDICTED: endoglucanase 9-like [Vitis vinifera]
           gi|297734804|emb|CBI17038.3| unnamed protein product
           [Vitis vinifera]
          Length = 494

 Score =  209 bits (531), Expect(2) = 4e-70
 Identities = 97/118 (82%), Positives = 103/118 (87%)
 Frame = -2

Query: 539 GISDGLAAHVDLRGGYYDAGDNVKFNFPMAFTTTMLSWSTLEYGERMGSQLGSARGAIRW 360
           G+SDG  A VDL GGYYDAGDNVKFNFPMAF TTMLSW TLEYG+RMG QL ++R AIRW
Sbjct: 66  GLSDGSLARVDLTGGYYDAGDNVKFNFPMAFATTMLSWGTLEYGKRMGPQLQNSRAAIRW 125

Query: 359 ATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSVGNPGSDVAGET 186
           ATDYL+KCAT TP  LYVGVGDP ADHKCWERPEDMDTVR+VYSVS  NPGSDVAGET
Sbjct: 126 ATDYLIKCATTTPNTLYVGVGDPTADHKCWERPEDMDTVRTVYSVSPRNPGSDVAGET 183



 Score = 82.0 bits (201), Expect(2) = 4e-70
 Identities = 40/55 (72%), Positives = 43/55 (78%)
 Frame = -1

Query: 183 AAASMVFRKVDPXXXXXXXXXXXKVMQFALQYKGAYSDSLGLAMCPFYCSYSGYK 19
           AAASMVFRKVDP           KVMQFA+QY+GAYSDSLG A+CPFYCSYSGYK
Sbjct: 188 AAASMVFRKVDPKYSRLLLATAKKVMQFAMQYRGAYSDSLGSAVCPFYCSYSGYK 242


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