BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024459
         (501 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containi...   248   3e-64
ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...   242   3e-62
ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat...   242   3e-62
ref|XP_002325018.1| predicted protein [Populus trichocarpa] gi|2...   238   5e-61
emb|CAN76870.1| hypothetical protein VITISV_012312 [Vitis vinifera]   231   6e-59

>ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
            [Vitis vinifera] gi|297738773|emb|CBI28018.3| unnamed
            protein product [Vitis vinifera]
          Length = 695

 Score =  248 bits (634), Expect = 3e-64
 Identities = 114/165 (69%), Positives = 138/165 (83%)
 Frame = -1

Query: 501  LSNMYAGCGRWKDVASMRSLIQDKKIQKFAAYSWINIDNEVHKFVSGDRTHPQTHDIYKE 322
            LSN+YA CGRWKDVA++RSL+++ KI+KFAAYSWI IDN+VHKFV+ DRTH +T  IY+E
Sbjct: 531  LSNIYAACGRWKDVAAVRSLMKNNKIKKFAAYSWIEIDNQVHKFVAEDRTHSETEQIYEE 590

Query: 321  LSRLLNKMRDAGFVSDTNVALHDVGEEEKVESVCYHSEKLALAFALISRPHSVTAIRILK 142
            L+RL+ K++++GF  DTN+ LHDV EEEK +S+CYHSEKLALAF LI +PH  T IRI+K
Sbjct: 591  LNRLIKKLQESGFTPDTNLVLHDVVEEEKFDSICYHSEKLALAFWLIKKPHGRTPIRIMK 650

Query: 141  NIRVCGDCHLFMKFVSKSIGRRIILRDSNLFHHFEGGQCSCNDYW 7
            NIRVCGDCH+FMKFVSK I R IILRD N FHHF  G+CSC D W
Sbjct: 651  NIRVCGDCHVFMKFVSKIIRRPIILRDINRFHHFIEGRCSCKDSW 695


>ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
            repeat-containing protein At1g68930-like [Cucumis
            sativus]
          Length = 695

 Score =  242 bits (617), Expect = 3e-62
 Identities = 105/165 (63%), Positives = 137/165 (83%)
 Frame = -1

Query: 501  LSNMYAGCGRWKDVASMRSLIQDKKIQKFAAYSWINIDNEVHKFVSGDRTHPQTHDIYKE 322
            LSNMYA  GRWKDVAS+R+L++ K ++KFA +SWI IDNEVH+F S DRTHP++ DIY++
Sbjct: 531  LSNMYASMGRWKDVASVRNLMKSKNVKKFAGFSWIEIDNEVHRFTSEDRTHPESEDIYEK 590

Query: 321  LSRLLNKMRDAGFVSDTNVALHDVGEEEKVESVCYHSEKLALAFALISRPHSVTAIRILK 142
            L+ L+ K+++ GF  +TN+ LHDVGE+EK +S+C+HSEKLALAF LI +P+ ++ IRI+K
Sbjct: 591  LNMLIGKLQEEGFTPNTNLVLHDVGEDEKFKSICFHSEKLALAFGLIKKPNGISPIRIIK 650

Query: 141  NIRVCGDCHLFMKFVSKSIGRRIILRDSNLFHHFEGGQCSCNDYW 7
            NIR+C DCH FMKF S+ IGR+IILRDSN FHHF  G+CSCND W
Sbjct: 651  NIRICNDCHEFMKFASRIIGRQIILRDSNRFHHFSTGKCSCNDNW 695


>ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At1g68930-like [Cucumis sativus]
          Length = 695

 Score =  242 bits (617), Expect = 3e-62
 Identities = 105/165 (63%), Positives = 137/165 (83%)
 Frame = -1

Query: 501  LSNMYAGCGRWKDVASMRSLIQDKKIQKFAAYSWINIDNEVHKFVSGDRTHPQTHDIYKE 322
            LSNMYA  GRWKDVAS+R+L++ K ++KFA +SWI IDNEVH+F S DRTHP++ DIY++
Sbjct: 531  LSNMYASMGRWKDVASVRNLMKSKNVKKFAGFSWIEIDNEVHRFTSEDRTHPESEDIYEK 590

Query: 321  LSRLLNKMRDAGFVSDTNVALHDVGEEEKVESVCYHSEKLALAFALISRPHSVTAIRILK 142
            L+ L+ K+++ GF  +TN+ LHDVGE+EK +S+C+HSEKLALAF LI +P+ ++ IRI+K
Sbjct: 591  LNMLIGKLQEEGFTPNTNLVLHDVGEDEKFKSICFHSEKLALAFGLIKKPNGISPIRIIK 650

Query: 141  NIRVCGDCHLFMKFVSKSIGRRIILRDSNLFHHFEGGQCSCNDYW 7
            NIR+C DCH FMKF S+ IGR+IILRDSN FHHF  G+CSCND W
Sbjct: 651  NIRICNDCHEFMKFASRIIGRQIILRDSNRFHHFSTGKCSCNDNW 695


>ref|XP_002325018.1| predicted protein [Populus trichocarpa] gi|222866452|gb|EEF03583.1|
            predicted protein [Populus trichocarpa]
          Length = 695

 Score =  238 bits (606), Expect = 5e-61
 Identities = 108/165 (65%), Positives = 133/165 (80%)
 Frame = -1

Query: 501  LSNMYAGCGRWKDVASMRSLIQDKKIQKFAAYSWINIDNEVHKFVSGDRTHPQTHDIYKE 322
            LSNMYA  GRWKDVAS+RSL++ K ++KF+AYSWI IDNEVHKFV+ DRTHP    I+ +
Sbjct: 531  LSNMYAARGRWKDVASIRSLMKSKHVKKFSAYSWIEIDNEVHKFVADDRTHPDAKIIHVQ 590

Query: 321  LSRLLNKMRDAGFVSDTNVALHDVGEEEKVESVCYHSEKLALAFALISRPHSVTAIRILK 142
            L+RL+ K+++AGF  +TN+ LHD GE+EK+ES+ YHSEKLALA+ LI +PH VT IRI+K
Sbjct: 591  LNRLIRKLQEAGFSPNTNLVLHDFGEDEKLESINYHSEKLALAYGLIKKPHGVTPIRIIK 650

Query: 141  NIRVCGDCHLFMKFVSKSIGRRIILRDSNLFHHFEGGQCSCNDYW 7
            NIR C DCH+FMKFVS    R +ILRDSN FHHF  G+CSC DYW
Sbjct: 651  NIRTCADCHIFMKFVSNITRRPVILRDSNRFHHFVEGKCSCKDYW 695


>emb|CAN76870.1| hypothetical protein VITISV_012312 [Vitis vinifera]
          Length = 420

 Score =  231 bits (588), Expect = 6e-59
 Identities = 107/160 (66%), Positives = 133/160 (83%)
 Frame = -1

Query: 501 LSNMYAGCGRWKDVASMRSLIQDKKIQKFAAYSWINIDNEVHKFVSGDRTHPQTHDIYKE 322
           LSN+YA CGRWKDVA++RSL+++ KI+KFAAYSWI ID++VHKFV+ DRTH +T  IY +
Sbjct: 219 LSNIYAACGRWKDVAAVRSLMKNNKIKKFAAYSWIEIDSQVHKFVAEDRTHSETEQIYDK 278

Query: 321 LSRLLNKMRDAGFVSDTNVALHDVGEEEKVESVCYHSEKLALAFALISRPHSVTAIRILK 142
           L+RL+ K++++GF  DTN+ LHDV EEEK +S+CYHSEKLALAF LI +PH  T IRI+K
Sbjct: 279 LNRLIKKLQESGFTPDTNLVLHDVVEEEKFDSICYHSEKLALAFWLIKKPHGRTPIRIMK 338

Query: 141 NIRVCGDCHLFMKFVSKSIGRRIILRDSNLFHHFEGGQCS 22
           NIRVCGDCH+FMKFVSK I R IILRD N FHHF  G+ +
Sbjct: 339 NIRVCGDCHVFMKFVSKIIRRPIILRDINRFHHFVEGRAN 378