BLASTX nr result

ID: Coptis24_contig00024452 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024452
         (248 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317800.1| predicted protein [Populus trichocarpa] gi|2...   116   2e-24
ref|XP_002321979.1| predicted protein [Populus trichocarpa] gi|2...   114   1e-23
ref|XP_004155706.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   112   2e-23
ref|XP_004142595.1| PREDICTED: uncharacterized protein LOC101209...   112   2e-23
ref|XP_002515683.1| conserved hypothetical protein [Ricinus comm...   107   1e-21

>ref|XP_002317800.1| predicted protein [Populus trichocarpa] gi|222858473|gb|EEE96020.1|
           predicted protein [Populus trichocarpa]
          Length = 2414

 Score =  116 bits (291), Expect = 2e-24
 Identities = 56/82 (68%), Positives = 67/82 (81%)
 Frame = +3

Query: 3   LCSAQGADDVNMFLSRIKDEVFVLLECVDKVGPTEEAVKTLLAYGLRITDKYRFLASEDG 182
           L S+QG D +NMFLS IKD  FVL ECVDKVGPTE+AVK LL+YGL++TD++RF  SE  
Sbjct: 475 LHSSQGKDGINMFLSNIKDHSFVLSECVDKVGPTEDAVKALLSYGLQVTDQFRFSESEAD 534

Query: 183 ESSEIWSFRVGRLRLLQFRDRL 248
           E S+IW FR+ RL+LLQFRDRL
Sbjct: 535 EGSQIWDFRMARLQLLQFRDRL 556


>ref|XP_002321979.1| predicted protein [Populus trichocarpa] gi|222868975|gb|EEF06106.1|
           predicted protein [Populus trichocarpa]
          Length = 2421

 Score =  114 bits (284), Expect = 1e-23
 Identities = 53/82 (64%), Positives = 66/82 (80%)
 Frame = +3

Query: 3   LCSAQGADDVNMFLSRIKDEVFVLLECVDKVGPTEEAVKTLLAYGLRITDKYRFLASEDG 182
           L S QG DD+NMFLS+IKD  FV+ ECVDKVGPTE+AVK LL+YGL +TD++ F  S+  
Sbjct: 484 LHSGQGKDDINMFLSKIKDHSFVISECVDKVGPTEDAVKALLSYGLHVTDQFCFSESKSD 543

Query: 183 ESSEIWSFRVGRLRLLQFRDRL 248
           + S+IW FR+ RL+LLQFRDRL
Sbjct: 544 KGSQIWDFRIARLQLLQFRDRL 565


>ref|XP_004155706.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101228677 [Cucumis sativus]
          Length = 2405

 Score =  112 bits (281), Expect = 2e-23
 Identities = 52/82 (63%), Positives = 70/82 (85%)
 Frame = +3

Query: 3   LCSAQGADDVNMFLSRIKDEVFVLLECVDKVGPTEEAVKTLLAYGLRITDKYRFLASEDG 182
           L S QG +++N +LS+IKD+VFVL EC++KVGPTE+ VK +L YGL++T++Y+FL  ED 
Sbjct: 483 LHSNQGTNEMNAYLSKIKDQVFVLSECIEKVGPTEDTVKAMLDYGLKLTNRYQFLDVEDL 542

Query: 183 ESSEIWSFRVGRLRLLQFRDRL 248
           ES+EIWSFR+ RLRLLQF+DRL
Sbjct: 543 ESNEIWSFRLARLRLLQFKDRL 564


>ref|XP_004142595.1| PREDICTED: uncharacterized protein LOC101209372 [Cucumis sativus]
          Length = 2405

 Score =  112 bits (281), Expect = 2e-23
 Identities = 52/82 (63%), Positives = 70/82 (85%)
 Frame = +3

Query: 3   LCSAQGADDVNMFLSRIKDEVFVLLECVDKVGPTEEAVKTLLAYGLRITDKYRFLASEDG 182
           L S QG +++N +LS+IKD+VFVL EC++KVGPTE+ VK +L YGL++T++Y+FL  ED 
Sbjct: 483 LHSNQGTNEMNAYLSKIKDQVFVLSECIEKVGPTEDTVKAMLDYGLKLTNRYQFLDVEDL 542

Query: 183 ESSEIWSFRVGRLRLLQFRDRL 248
           ES+EIWSFR+ RLRLLQF+DRL
Sbjct: 543 ESNEIWSFRLARLRLLQFKDRL 564


>ref|XP_002515683.1| conserved hypothetical protein [Ricinus communis]
           gi|223545226|gb|EEF46735.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 2429

 Score =  107 bits (267), Expect = 1e-21
 Identities = 50/80 (62%), Positives = 63/80 (78%)
 Frame = +3

Query: 9   SAQGADDVNMFLSRIKDEVFVLLECVDKVGPTEEAVKTLLAYGLRITDKYRFLASEDGES 188
           S QG +D+N+FLS IKD  +VL ECV KVGPTE+A+K LLAYGL  TD++RF  +ED + 
Sbjct: 492 SCQGVNDINLFLSNIKDHGYVLSECVHKVGPTEDAMKALLAYGLHATDQHRFSVAEDHQR 551

Query: 189 SEIWSFRVGRLRLLQFRDRL 248
           SEIW  R+ RL+LLQ+RDRL
Sbjct: 552 SEIWDLRLARLQLLQYRDRL 571


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