BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024445
         (1181 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004149572.1| PREDICTED: THO complex subunit 3-like [Cucum...   596   e-168
ref|XP_004170178.1| PREDICTED: THO complex subunit 3-like [Cucum...   594   e-167
ref|XP_002274754.1| PREDICTED: THO complex subunit 3 [Vitis vini...   590   e-166
ref|XP_003551358.1| PREDICTED: THO complex subunit 3-like [Glyci...   583   e-164
ref|XP_003532202.1| PREDICTED: THO complex subunit 3-like [Glyci...   582   e-164

>ref|XP_004149572.1| PREDICTED: THO complex subunit 3-like [Cucumis sativus]
          Length = 314

 Score =  596 bits (1537), Expect = e-168
 Identities = 278/310 (89%), Positives = 296/310 (95%)
 Frame = -2

Query: 1177 SVPNFKNLYSREYQGHKKKVHSVAWNCTGTKLASGSVDQTARISHIEPHGHSKVKDIELK 998
            S   FKNL+SREYQGHKKKVHSVAWNCTG KLASGSVDQTAR+ HIEPHGH KVKD+ELK
Sbjct: 4    SAQAFKNLHSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELK 63

Query: 997  GHTDSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQVELSGENINITYKPDGTHI 818
            GHTDSVDQLCWDPKH+DLIATASGDKTVRLWDAR+GKCSQQ ELSGENINITYKPDGTHI
Sbjct: 64   GHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGKCSQQAELSGENINITYKPDGTHI 123

Query: 817  AVGNRDDELTILDVRKFKPIHKRKFNYEVNEIAWNTTGEIFFLTTGNGTVEVLAYPSLKA 638
            AVGNRDDELTILDVRKFKP+HKRKFNYEVNEIAWN TGE+FFLTTGNGTVEVLAYPSL+ 
Sbjct: 124  AVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRP 183

Query: 637  LHTLMAHTAGCYCIAIDPTGSYFAVGSADSLVSLWDMSEMLCVRTFTKLEWPVRTISFNS 458
            + TLMAHTAGCYCIAIDP G YFAVGSADSLVSLWD+S+MLCVRTFTKLEWPVRTISFN 
Sbjct: 184  IETLMAHTAGCYCIAIDPVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNH 243

Query: 457  TGEYIASASEDLFIDVANVQSGRTIHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYSADD 278
            TGEYIASASEDLFID++NVQ+GRT+HQIPCRAAMNSVEWNPKHNLLAYAGDDKNKY AD+
Sbjct: 244  TGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQADE 303

Query: 277  GVFRVFGFES 248
            G+FR+FGFES
Sbjct: 304  GIFRIFGFES 313


>ref|XP_004170178.1| PREDICTED: THO complex subunit 3-like [Cucumis sativus]
          Length = 314

 Score =  594 bits (1532), Expect = e-167
 Identities = 277/310 (89%), Positives = 295/310 (95%)
 Frame = -2

Query: 1177 SVPNFKNLYSREYQGHKKKVHSVAWNCTGTKLASGSVDQTARISHIEPHGHSKVKDIELK 998
            S   FKNL+SREYQGHKKKVHSVAWNCTG KLASGSVDQTAR+ HIEPHGH KVKD+ELK
Sbjct: 4    SAQAFKNLHSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELK 63

Query: 997  GHTDSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQVELSGENINITYKPDGTHI 818
            GHTDSVDQLCWDPKH+DLIATASGDKTVRLWDAR+GKCSQQ ELSGENINITYKPDGTHI
Sbjct: 64   GHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGKCSQQAELSGENINITYKPDGTHI 123

Query: 817  AVGNRDDELTILDVRKFKPIHKRKFNYEVNEIAWNTTGEIFFLTTGNGTVEVLAYPSLKA 638
            AVGNRDDELTILDVRKFKP+HKRKFNYEVNEIAWN TGE+FFLTTGNGTVEVLAYPSL+ 
Sbjct: 124  AVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRP 183

Query: 637  LHTLMAHTAGCYCIAIDPTGSYFAVGSADSLVSLWDMSEMLCVRTFTKLEWPVRTISFNS 458
            + TLMAHTAGCYCIAIDP G YFAVGSADSLVSLWD+S+MLCVRTFTKL WPVRTISFN 
Sbjct: 184  IETLMAHTAGCYCIAIDPVGGYFAVGSADSLVSLWDISQMLCVRTFTKLRWPVRTISFNH 243

Query: 457  TGEYIASASEDLFIDVANVQSGRTIHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYSADD 278
            TGEYIASASEDLFID++NVQ+GRT+HQIPCRAAMNSVEWNPKHNLLAYAGDDKNKY AD+
Sbjct: 244  TGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQADE 303

Query: 277  GVFRVFGFES 248
            G+FR+FGFES
Sbjct: 304  GIFRIFGFES 313


>ref|XP_002274754.1| PREDICTED: THO complex subunit 3 [Vitis vinifera]
            gi|147789347|emb|CAN62349.1| hypothetical protein
            VITISV_004943 [Vitis vinifera]
            gi|296089987|emb|CBI39806.3| unnamed protein product
            [Vitis vinifera]
          Length = 313

 Score =  590 bits (1520), Expect = e-166
 Identities = 280/307 (91%), Positives = 294/307 (95%)
 Frame = -2

Query: 1165 FKNLYSREYQGHKKKVHSVAWNCTGTKLASGSVDQTARISHIEPHGHSKVKDIELKGHTD 986
            FKNL+SREYQGHKKKVHSVAWNCTGTKLASGSVDQTARI  IE HGH KVKDIELKGHTD
Sbjct: 7    FKNLHSREYQGHKKKVHSVAWNCTGTKLASGSVDQTARIWLIEQHGHGKVKDIELKGHTD 66

Query: 985  SVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQVELSGENINITYKPDGTHIAVGN 806
            SVDQLCWDPKHADLIATASGDKTVRLWDARSGKC+QQ ELSGENINITYKPDGTHIAVGN
Sbjct: 67   SVDQLCWDPKHADLIATASGDKTVRLWDARSGKCTQQAELSGENINITYKPDGTHIAVGN 126

Query: 805  RDDELTILDVRKFKPIHKRKFNYEVNEIAWNTTGEIFFLTTGNGTVEVLAYPSLKALHTL 626
            RDDELTILDVRKFKPIH+RKF+YEVNEIAWN TGE+FFLTTGNGTVEVLAYP+L+ L TL
Sbjct: 127  RDDELTILDVRKFKPIHRRKFSYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPALRPLDTL 186

Query: 625  MAHTAGCYCIAIDPTGSYFAVGSADSLVSLWDMSEMLCVRTFTKLEWPVRTISFNSTGEY 446
            MAHTAGCYCIAIDP G YFAVGSADSLVSLWD+SEMLCVRTFTKLEWPVRTISFN TGEY
Sbjct: 187  MAHTAGCYCIAIDPIGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFNHTGEY 246

Query: 445  IASASEDLFIDVANVQSGRTIHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYSADDGVFR 266
            IASASEDLFID++NV +GRT+HQIPCRAAMNSVEWNPKHNLLAYAGDDKNKY AD+GVFR
Sbjct: 247  IASASEDLFIDISNVHTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQADEGVFR 306

Query: 265  VFGFESA 245
            +FGFESA
Sbjct: 307  IFGFESA 313


>ref|XP_003551358.1| PREDICTED: THO complex subunit 3-like [Glycine max]
          Length = 313

 Score =  583 bits (1503), Expect = e-164
 Identities = 273/307 (88%), Positives = 293/307 (95%)
 Frame = -2

Query: 1165 FKNLYSREYQGHKKKVHSVAWNCTGTKLASGSVDQTARISHIEPHGHSKVKDIELKGHTD 986
            FKNL++REY GHKKKVHSVAWNC GTKLASGSVDQTARI HIEPHGH KVKDIELKGHTD
Sbjct: 7    FKNLHNREYSGHKKKVHSVAWNCIGTKLASGSVDQTARIWHIEPHGHGKVKDIELKGHTD 66

Query: 985  SVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQVELSGENINITYKPDGTHIAVGN 806
            SVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQ ELSGENINITYKPDGTH+AVGN
Sbjct: 67   SVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHVAVGN 126

Query: 805  RDDELTILDVRKFKPIHKRKFNYEVNEIAWNTTGEIFFLTTGNGTVEVLAYPSLKALHTL 626
            RDDELTILDVRKFKPIH+RKFNYEVNEIAWN TGE+FFLTTGNGTVEVL+YPSL+ L TL
Sbjct: 127  RDDELTILDVRKFKPIHRRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLSYPSLRPLDTL 186

Query: 625  MAHTAGCYCIAIDPTGSYFAVGSADSLVSLWDMSEMLCVRTFTKLEWPVRTISFNSTGEY 446
            MAHTAGCYCIAIDP G YFAVGSADSLVSLWD+SEMLCVRTFTKLEWPVRTI FN TG++
Sbjct: 187  MAHTAGCYCIAIDPVGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTIGFNYTGDF 246

Query: 445  IASASEDLFIDVANVQSGRTIHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYSADDGVFR 266
            IASASEDLFID++NV +GRT+HQIPCRAAMNSVEWNPK+NLLAYAGDDKNK+ AD+GVFR
Sbjct: 247  IASASEDLFIDISNVHTGRTVHQIPCRAAMNSVEWNPKYNLLAYAGDDKNKHQADEGVFR 306

Query: 265  VFGFESA 245
            +FGF++A
Sbjct: 307  IFGFKNA 313


>ref|XP_003532202.1| PREDICTED: THO complex subunit 3-like [Glycine max]
          Length = 313

 Score =  582 bits (1499), Expect = e-164
 Identities = 272/307 (88%), Positives = 293/307 (95%)
 Frame = -2

Query: 1165 FKNLYSREYQGHKKKVHSVAWNCTGTKLASGSVDQTARISHIEPHGHSKVKDIELKGHTD 986
            FKNL+SREY GHKKKVHSVAWNC GTKLASGSVDQTARI HIEPHGH KVKDIELKGHTD
Sbjct: 7    FKNLHSREYSGHKKKVHSVAWNCIGTKLASGSVDQTARIWHIEPHGHGKVKDIELKGHTD 66

Query: 985  SVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQVELSGENINITYKPDGTHIAVGN 806
            SVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQ ELSGENINITYKPDGTH+AVGN
Sbjct: 67   SVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHVAVGN 126

Query: 805  RDDELTILDVRKFKPIHKRKFNYEVNEIAWNTTGEIFFLTTGNGTVEVLAYPSLKALHTL 626
            RDDELTILDVRKFKPIH+RKFNYEVNEI+WN TGE+FFLTTGNGTVEVL+YPSL+ L TL
Sbjct: 127  RDDELTILDVRKFKPIHRRKFNYEVNEISWNMTGEMFFLTTGNGTVEVLSYPSLRPLDTL 186

Query: 625  MAHTAGCYCIAIDPTGSYFAVGSADSLVSLWDMSEMLCVRTFTKLEWPVRTISFNSTGEY 446
            MAHTAGCYCIAIDP G YFAVGSADSLVSLWD+SEMLCVRTFTKLEWPVRTI FN +G++
Sbjct: 187  MAHTAGCYCIAIDPVGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTIGFNYSGDF 246

Query: 445  IASASEDLFIDVANVQSGRTIHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYSADDGVFR 266
            IASASEDLFID++NV +GRT+HQIPCRAAMNSVEWNPK+NLLAYAGDDKNK+ AD+GVFR
Sbjct: 247  IASASEDLFIDISNVHTGRTVHQIPCRAAMNSVEWNPKYNLLAYAGDDKNKHQADEGVFR 306

Query: 265  VFGFESA 245
            +FGF++A
Sbjct: 307  IFGFKNA 313