BLASTX nr result

ID: Coptis24_contig00024435 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024435
         (581 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001240155.1| uncharacterized protein LOC100803425 [Glycin...    86   5e-15
ref|XP_004138185.1| PREDICTED: uncharacterized protein LOC101205...    84   1e-14
ref|XP_003531847.1| PREDICTED: uncharacterized protein LOC100814...    78   9e-13
ref|XP_002324100.1| predicted protein [Populus trichocarpa] gi|2...    76   5e-12
ref|XP_002281421.1| PREDICTED: uncharacterized protein LOC100251...    74   2e-11

>ref|NP_001240155.1| uncharacterized protein LOC100803425 [Glycine max]
           gi|255638831|gb|ACU19719.1| unknown [Glycine max]
          Length = 296

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 66/171 (38%), Positives = 82/171 (47%), Gaps = 16/171 (9%)
 Frame = -3

Query: 489 QTPN---SSSTVLAPPGIDSSYTTPLNSYYTNAHVGFEAQPTFSYDTYQSSQVGTLPTSN 319
           Q PN   SSS  L PPG+D    TPLN     AH   E  P      Y  S VG   +S 
Sbjct: 36  QNPNPNPSSSLPLNPPGVDPQ--TPLNPISYAAH---EPVPGL---VYAQSLVGDDSSSG 87

Query: 318 YYQDPSISSSWVAKEAVQHYGALPE---PGYSTAINSLNSNQIPNQILPTNPNNLAYDAT 148
           Y  D     +WVA+EAV+ +G  P    PG S   N         Q+   NP++L +  T
Sbjct: 88  YCLD----HNWVAREAVRQFGTDPTLYAPGISLPPNG------SEQLAMANPSSLWWTNT 137

Query: 147 QTIP----------KNTKVSESVRCEICKIECTSKDAHDKHLYGKKHKRNL 25
            T P          K TKV +   CE+CKIECT K+  D+H  GKKHK+N+
Sbjct: 138 TTQPHVNGTPKKNQKKTKVVQPAFCEVCKIECTGKEVLDQHKLGKKHKKNV 188


>ref|XP_004138185.1| PREDICTED: uncharacterized protein LOC101205563 [Cucumis sativus]
           gi|449530728|ref|XP_004172345.1| PREDICTED:
           uncharacterized LOC101205563 [Cucumis sativus]
          Length = 270

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 59/148 (39%), Positives = 78/148 (52%), Gaps = 2/148 (1%)
 Frame = -3

Query: 462 LAPPGIDS-SYTTPLNSYYTNAHVGFEAQPTFSYDTYQSSQVGTLPTSNYYQDPSISS-S 289
           L PPG D  S +T L S Y    VG E QP F                  Y DPS++S +
Sbjct: 51  LHPPGTDPYSNSTVLTSTY----VGLEPQPQF------------------YADPSLASHT 88

Query: 288 WVAKEAVQHYGALPEPGYSTAINSLNSNQIPNQILPTNPNNLAYDATQTIPKNTKVSESV 109
           WV  + +   G   +      I S +SN + N   PT   +LAY+AT+T    TK ++ V
Sbjct: 89  WVLPQ-LDAAGFAFKSLLENQIASTSSNSLLNGNWPTQ--SLAYNATRTKHVKTKFTQPV 145

Query: 108 RCEICKIECTSKDAHDKHLYGKKHKRNL 25
           RCE+CKI+C SKD  DKH+ G+KHK+NL
Sbjct: 146 RCEVCKIDCNSKDVFDKHVMGRKHKKNL 173


>ref|XP_003531847.1| PREDICTED: uncharacterized protein LOC100814580 [Glycine max]
          Length = 302

 Score = 78.2 bits (191), Expect = 9e-13
 Identities = 61/168 (36%), Positives = 81/168 (48%), Gaps = 16/168 (9%)
 Frame = -3

Query: 480 NSSSTVLAPPGIDSSYTTPLNSYYTNAHVGFEAQPTFSYDTYQSSQVGTLPTSNYYQDPS 301
           +SSS  + PPG+D    TPLN     AH   E  P      Y    VG   +S Y  D  
Sbjct: 45  SSSSLPINPPGVDPQ--TPLNPISYAAH---EPVPAL---IYAQRLVGDNSSSGYCLD-- 94

Query: 300 ISSSWVAKEAVQHYGALPE---PGYSTAINSLNSNQIPNQILPTNPNN-LAYDATQTIP- 136
              +W A++AV+ +G  P    PG S   N         Q+   NP++ L +  T T+P 
Sbjct: 95  --QNWAARDAVRQFGTDPTLYAPGISLPSNG------SEQLAMANPSSSLWWTNTTTLPH 146

Query: 135 ------KN-----TKVSESVRCEICKIECTSKDAHDKHLYGKKHKRNL 25
                 KN     TK+ +   CE+CKIECTSKD  D+H  GKKHK+N+
Sbjct: 147 VNGILKKNQKKAKTKIVQPAFCEVCKIECTSKDVLDQHKLGKKHKKNV 194


>ref|XP_002324100.1| predicted protein [Populus trichocarpa] gi|222867102|gb|EEF04233.1|
           predicted protein [Populus trichocarpa]
          Length = 289

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 53/144 (36%), Positives = 70/144 (48%), Gaps = 14/144 (9%)
 Frame = -3

Query: 414 YYTNAHVGFEAQPTFSYDTYQSSQVGTLPTSNYYQDPSISSSWVAKEAVQHYG----ALP 247
           Y T+   G       SY  Y        P   Y  DP+ S++WVAKEAV+ YG    A P
Sbjct: 48  YTTDPTTGLTPPGVESYTNY--------PHLAYCFDPN-SNTWVAKEAVRQYGSAPAAFP 98

Query: 246 EPGYST---------AINSLNSNQIPN-QILPTNPNNLAYDATQTIPKNTKVSESVRCEI 97
            P  +T         A++ L+S    N   L    +N      +T  K TKV +S  CE+
Sbjct: 99  APVSNTIPPNGTEQLAVSHLDSTVWANLTFLAQGNSNQQKQQKKTQQKKTKVVQSAYCEV 158

Query: 96  CKIECTSKDAHDKHLYGKKHKRNL 25
           CK++C SKD  D+H  GKKHK+NL
Sbjct: 159 CKVDCNSKDVLDQHKLGKKHKKNL 182


>ref|XP_002281421.1| PREDICTED: uncharacterized protein LOC100251937 [Vitis vinifera]
           gi|297733915|emb|CBI15162.3| unnamed protein product
           [Vitis vinifera]
          Length = 424

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 59/160 (36%), Positives = 75/160 (46%), Gaps = 7/160 (4%)
 Frame = -3

Query: 483 PNSSSTVLAPPGIDSSYTTPLNSYYTNAHVGFEAQPTFSYDTYQSSQVGTLPTSNYYQDP 304
           P  S  VL P  ID  Y+   +S Y + HV    Q T                   Y+DP
Sbjct: 30  PLFSQPVLHPTSIDP-YSH--SSLYPSIHVVLGGQAT------------------RYEDP 68

Query: 303 S-ISSSWVAKEAVQ-HYGALPEPG-----YSTAINSLNSNQIPNQILPTNPNNLAYDATQ 145
           + +S +WV K A    Y    +P       ST++NSL SN  P          L  D T 
Sbjct: 69  NAVSQNWVVKNADPITYEPAVKPSNEKAVVSTSLNSLWSNNQP----------LVNDMTI 118

Query: 144 TIPKNTKVSESVRCEICKIECTSKDAHDKHLYGKKHKRNL 25
            IP+ TKV  S+RCE+C I+C SKD  +KH+ GKKH RNL
Sbjct: 119 RIPEQTKVILSLRCEVCNIDCNSKDVLEKHISGKKHNRNL 158


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