BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024434
         (543 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004155400.1| PREDICTED: DNA polymerase lambda-like, parti...   132   3e-29
ref|XP_004135473.1| PREDICTED: DNA polymerase lambda-like [Cucum...   132   3e-29
ref|XP_002266446.2| PREDICTED: DNA polymerase lambda-like [Vitis...   131   6e-29
emb|CBI32097.3| unnamed protein product [Vitis vinifera]              131   6e-29
ref|XP_003613736.1| DNA polymerase beta [Medicago truncatula] gi...   127   9e-28

>ref|XP_004155400.1| PREDICTED: DNA polymerase lambda-like, partial [Cucumis sativus]
          Length = 400

 Score =  132 bits (333), Expect = 3e-29
 Identities = 73/158 (46%), Positives = 96/158 (60%), Gaps = 1/158 (0%)
 Frame = +1

Query: 67  SLETDEHGMFEGMLVYFVENGVQSRRLQIWKEKLVLMGATVEDQISKVVTHIFVLDLKTL 246
           SL  D HGMF GM+V+ VE GVQ+RRLQIWK+KLV MGA++E+++SK+V+HIF   L  L
Sbjct: 10  SLSEDPHGMFAGMVVFLVEKGVQTRRLQIWKQKLVQMGASIEERLSKMVSHIFASSLDAL 69

Query: 247 LQ-VGNEHLMRFKGSILLYQWLEESLKSGEKVSEGLYNLKTQMGGVDERGKSLKYFSSGQ 423
           L+ V    L RFKG +L YQWLE+SL SGEK SE LY +K    G+DE G+         
Sbjct: 70  LEKVDGARLARFKGKVLSYQWLEDSLSSGEKASEDLYTVKV---GLDEDGR--------- 117

Query: 424 LKENQFDDDELPHVKKVRMFPETSQVACASQGDDNSSS 537
                 D  +    KK+ + P  S+      G D+ +S
Sbjct: 118 ------DKPQQSTPKKLNLSPNNSEAVSFESGGDSDAS 149


>ref|XP_004135473.1| PREDICTED: DNA polymerase lambda-like [Cucumis sativus]
          Length = 521

 Score =  132 bits (333), Expect = 3e-29
 Identities = 73/158 (46%), Positives = 96/158 (60%), Gaps = 1/158 (0%)
 Frame = +1

Query: 67  SLETDEHGMFEGMLVYFVENGVQSRRLQIWKEKLVLMGATVEDQISKVVTHIFVLDLKTL 246
           SL  D HGMF GM+V+ VE GVQ+RRLQIWK+KLV MGA++E+++SK+V+HIF   L  L
Sbjct: 10  SLSEDPHGMFAGMVVFLVEKGVQTRRLQIWKQKLVQMGASIEERLSKMVSHIFASSLDAL 69

Query: 247 LQ-VGNEHLMRFKGSILLYQWLEESLKSGEKVSEGLYNLKTQMGGVDERGKSLKYFSSGQ 423
           L+ V    L RFKG +L YQWLE+SL SGEK SE LY +K    G+DE G+         
Sbjct: 70  LEKVDGARLARFKGKVLSYQWLEDSLSSGEKASEDLYTVKV---GLDEDGR--------- 117

Query: 424 LKENQFDDDELPHVKKVRMFPETSQVACASQGDDNSSS 537
                 D  +    KK+ + P  S+      G D+ +S
Sbjct: 118 ------DKPQQSTPKKLNLSPNNSEAVSFESGGDSDAS 149


>ref|XP_002266446.2| PREDICTED: DNA polymerase lambda-like [Vitis vinifera]
          Length = 543

 Score =  131 bits (330), Expect = 6e-29
 Identities = 70/155 (45%), Positives = 102/155 (65%), Gaps = 1/155 (0%)
 Frame = +1

Query: 76  TDEHGMFEGMLVYFVENGVQSRRLQIWKEKLVLMGATVEDQISKVVTHIFVLDLKTLL-Q 252
           +D +GMF GM+V+ VE GVQ+RRL+IWK+KLV MGAT+ D++SK V+H+F ++   LL Q
Sbjct: 13  SDPNGMFAGMVVFLVEYGVQTRRLEIWKQKLVQMGATIADRLSKRVSHVFAVNRDALLRQ 72

Query: 253 VGNEHLMRFKGSILLYQWLEESLKSGEKVSEGLYNLKTQMGGVDERGKSLKYFSSGQLKE 432
           VG EHL RF+G++L YQWLE+SL+ GEK+SE  YNLK      D  G + + F     + 
Sbjct: 73  VGREHLERFQGNVLQYQWLEDSLRLGEKISEDSYNLKFDSEVQDGPGNTSEIFPQPS-QL 131

Query: 433 NQFDDDELPHVKKVRMFPETSQVACASQGDDNSSS 537
           N   +D  P  K+++  PE +    + +   NS++
Sbjct: 132 NNSREDGAPQNKRMKSSPEKNMNEESRENKRNSTA 166


>emb|CBI32097.3| unnamed protein product [Vitis vinifera]
          Length = 547

 Score =  131 bits (330), Expect = 6e-29
 Identities = 70/155 (45%), Positives = 102/155 (65%), Gaps = 1/155 (0%)
 Frame = +1

Query: 76  TDEHGMFEGMLVYFVENGVQSRRLQIWKEKLVLMGATVEDQISKVVTHIFVLDLKTLL-Q 252
           +D +GMF GM+V+ VE GVQ+RRL+IWK+KLV MGAT+ D++SK V+H+F ++   LL Q
Sbjct: 13  SDPNGMFAGMVVFLVEYGVQTRRLEIWKQKLVQMGATIADRLSKRVSHVFAVNRDALLRQ 72

Query: 253 VGNEHLMRFKGSILLYQWLEESLKSGEKVSEGLYNLKTQMGGVDERGKSLKYFSSGQLKE 432
           VG EHL RF+G++L YQWLE+SL+ GEK+SE  YNLK      D  G + + F     + 
Sbjct: 73  VGREHLERFQGNVLQYQWLEDSLRLGEKISEDSYNLKFDSEVQDGPGNTSEIFPQPS-QL 131

Query: 433 NQFDDDELPHVKKVRMFPETSQVACASQGDDNSSS 537
           N   +D  P  K+++  PE +    + +   NS++
Sbjct: 132 NNSREDGAPQNKRMKSSPEKNMNEESRENKRNSTA 166


>ref|XP_003613736.1| DNA polymerase beta [Medicago truncatula]
           gi|355515071|gb|AES96694.1| DNA polymerase beta
           [Medicago truncatula]
          Length = 531

 Score =  127 bits (320), Expect = 9e-28
 Identities = 70/159 (44%), Positives = 102/159 (64%), Gaps = 3/159 (1%)
 Frame = +1

Query: 73  ETDEHGMFEGMLVYFVENGVQSRRLQIWKEKLVLMGATVEDQISKVVTHIFVLDLKTLL- 249
           + +++GMF GM+V+FV  GVQ+RRLQIWK+++V MGA +ED+ SK VTH+F +D  TLL 
Sbjct: 4   KAEQNGMFSGMVVFFVSKGVQARRLQIWKQRMVQMGAVIEDRFSKRVTHVFAVDSHTLLH 63

Query: 250 QVGNEHLMRFKGSILLYQWLEESLKSGEKVSEGLYNLK--TQMGGVDERGKSLKYFSSGQ 423
           +  ++ L RFKGS+LLYQWLE+SLKSGEK SE LY LK   Q  G++E   SL       
Sbjct: 64  EFDSQRLSRFKGSLLLYQWLEDSLKSGEKESEDLYVLKLDPQGEGINEIDTSL---DPEP 120

Query: 424 LKENQFDDDELPHVKKVRMFPETSQVACASQGDDNSSSA 540
           +  +   + +    KK++   E +++      +D   +A
Sbjct: 121 IDGSLSSEPQQLQNKKIKSSSEDAEIVNLKSNEDRRENA 159