BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024433
         (229 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16487.3| unnamed protein product [Vitis vinifera]               64   1e-08
ref|XP_002891825.1| hypothetical protein ARALYDRAFT_314752 [Arab...    59   3e-07
ref|NP_001185233.1| E3 ubiquitin-protein ligase BRE1-like 2 [Ara...    59   4e-07
emb|CAN76022.1| hypothetical protein VITISV_027071 [Vitis vinifera]    57   2e-06
ref|XP_004142159.1| PREDICTED: E3 ubiquitin-protein ligase BRE1-...    57   2e-06

>emb|CBI16487.3| unnamed protein product [Vitis vinifera]
          Length = 879

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 33/62 (53%), Positives = 38/62 (61%)
 Frame = +2

Query: 44  MARSSPTSPDERHVDAAVLQYQNQKLVQQLDAQKXXXXXXXXXXXXXXSKQSSYDDSLIA 223
           MAR+S  SPD R VDA  LQYQNQKLVQQL+ QK               +Q+SYDD LI 
Sbjct: 24  MARNSSVSPDNRSVDATYLQYQNQKLVQQLEVQKHELHDLEDKIKELKDRQTSYDDMLIT 83

Query: 224 VN 229
           +N
Sbjct: 84  MN 85


>ref|XP_002891825.1| hypothetical protein ARALYDRAFT_314752 [Arabidopsis lyrata subsp.
           lyrata] gi|297337667|gb|EFH68084.1| hypothetical protein
           ARALYDRAFT_314752 [Arabidopsis lyrata subsp. lyrata]
          Length = 879

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 35/63 (55%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
 Frame = +2

Query: 44  MAR-SSPTSPDERHVDAAVLQYQNQKLVQQLDAQKXXXXXXXXXXXXXXSKQSSYDDSLI 220
           MAR SSP+ P  + VDA VLQ QNQKLVQQLD QK               KQ+SYDD LI
Sbjct: 25  MARNSSPSHPIAKSVDATVLQLQNQKLVQQLDLQKKHLYDVETKIQELQIKQTSYDDELI 84

Query: 221 AVN 229
           +VN
Sbjct: 85  SVN 87


>ref|NP_001185233.1| E3 ubiquitin-protein ligase BRE1-like 2 [Arabidopsis thaliana]
           gi|332195091|gb|AEE33212.1| E3 ubiquitin-protein ligase
           BRE1-like 2 [Arabidopsis thaliana]
          Length = 899

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 35/65 (53%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
 Frame = +2

Query: 38  NIMAR-SSPTSPDERHVDAAVLQYQNQKLVQQLDAQKXXXXXXXXXXXXXXSKQSSYDDS 214
           N MAR SSP+ P  + VDA VLQ QNQKLVQQLD QK                Q+SYDD 
Sbjct: 23  NSMARNSSPSHPIAKSVDATVLQLQNQKLVQQLDLQKKQLYDVESKIQELQLNQTSYDDE 82

Query: 215 LIAVN 229
           LI+VN
Sbjct: 83  LISVN 87


>emb|CAN76022.1| hypothetical protein VITISV_027071 [Vitis vinifera]
          Length = 738

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 30/59 (50%), Positives = 35/59 (59%)
 Frame = +2

Query: 44  MARSSPTSPDERHVDAAVLQYQNQKLVQQLDAQKXXXXXXXXXXXXXXSKQSSYDDSLI 220
           MAR+S  SPD R VDA  +QYQNQKLVQQL+ QK                Q+SYDD L+
Sbjct: 1   MARNSSVSPDNRSVDATYVQYQNQKLVQQLEVQKHELHDLEDKTKELKDIQTSYDDILL 59


>ref|XP_004142159.1| PREDICTED: E3 ubiquitin-protein ligase BRE1-like 2-like [Cucumis
           sativus]
          Length = 880

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 32/63 (50%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
 Frame = +2

Query: 44  MARSSPTS-PDERHVDAAVLQYQNQKLVQQLDAQKXXXXXXXXXXXXXXSKQSSYDDSLI 220
           MAR+S TS P    VDA VL +QNQKLVQ+ D+QK               KQS YD+SLI
Sbjct: 23  MARNSTTSQPHNNSVDATVLHFQNQKLVQETDSQKHELQDLEAKIYELKKKQSFYDESLI 82

Query: 221 AVN 229
           A+N
Sbjct: 83  AIN 85