BLASTX nr result

ID: Coptis24_contig00024420 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024420
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_174039.1| putative inactive receptor kinase [Arabidopsis ...    91   1e-16
ref|XP_002890616.1| hypothetical protein ARALYDRAFT_889992 [Arab...    91   1e-16
ref|XP_002883614.1| hypothetical protein ARALYDRAFT_480045 [Arab...    90   2e-16
ref|NP_189486.1| leucine-rich repeat protein kinase-like protein...    88   6e-16
emb|CBI35007.3| unnamed protein product [Vitis vinifera]               87   1e-15

>ref|NP_174039.1| putative inactive receptor kinase [Arabidopsis thaliana]
           gi|75097079|sp|O04567.1|Y1719_ARATH RecName:
           Full=Probable inactive receptor kinase At1g27190; Flags:
           Precursor gi|8778873|gb|AAF79872.1|AC000348_25 T7N9.25
           [Arabidopsis thaliana] gi|53828509|gb|AAU94364.1|
           At1g27190 [Arabidopsis thaliana]
           gi|224589400|gb|ACN59234.1| leucine-rich repeat
           receptor-like protein kinase [Arabidopsis thaliana]
           gi|332192671|gb|AEE30792.1| putative inactive receptor
           kinase [Arabidopsis thaliana]
          Length = 601

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 38/67 (56%), Positives = 54/67 (80%)
 Frame = +2

Query: 116 NSIEDDIRCLQGFKNSLKDPQNRLASWNFINTTAGAVCKYDGVTCWSENEDRLIGIELLS 295
           +S EDD+ CLQG KNSL DP +RL+SW+F N++A ++CK  GV+CW+E E+R+I ++L S
Sbjct: 22  SSAEDDVLCLQGLKNSLIDPSSRLSSWSFPNSSASSICKLTGVSCWNEKENRIISLQLQS 81

Query: 296 MELGGEI 316
           M+L GEI
Sbjct: 82  MQLAGEI 88


>ref|XP_002890616.1| hypothetical protein ARALYDRAFT_889992 [Arabidopsis lyrata subsp.
           lyrata] gi|297336458|gb|EFH66875.1| hypothetical protein
           ARALYDRAFT_889992 [Arabidopsis lyrata subsp. lyrata]
          Length = 601

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 38/67 (56%), Positives = 54/67 (80%)
 Frame = +2

Query: 116 NSIEDDIRCLQGFKNSLKDPQNRLASWNFINTTAGAVCKYDGVTCWSENEDRLIGIELLS 295
           +S EDD+ CLQG KNSL DP +RL+SW+F N++A ++CK  GV+CW+E E+R+I ++L S
Sbjct: 22  SSAEDDVLCLQGLKNSLIDPSSRLSSWSFPNSSASSICKLTGVSCWNEKENRIISLQLQS 81

Query: 296 MELGGEI 316
           M+L GEI
Sbjct: 82  MQLAGEI 88


>ref|XP_002883614.1| hypothetical protein ARALYDRAFT_480045 [Arabidopsis lyrata subsp.
           lyrata] gi|297329454|gb|EFH59873.1| hypothetical protein
           ARALYDRAFT_480045 [Arabidopsis lyrata subsp. lyrata]
          Length = 616

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 38/67 (56%), Positives = 54/67 (80%)
 Frame = +2

Query: 116 NSIEDDIRCLQGFKNSLKDPQNRLASWNFINTTAGAVCKYDGVTCWSENEDRLIGIELLS 295
           +S EDD+ CLQG KNSL DP +RL+SW+F N++A ++CK  GV+CW+E E+R+I ++L S
Sbjct: 22  SSAEDDVLCLQGLKNSLIDPLSRLSSWSFPNSSASSICKLTGVSCWNEKENRIISLQLQS 81

Query: 296 MELGGEI 316
           M+L GEI
Sbjct: 82  MQLAGEI 88


>ref|NP_189486.1| leucine-rich repeat protein kinase-like protein [Arabidopsis
           thaliana] gi|9294580|dbj|BAB02861.1| receptor-like
           protein kinase-like protein [Arabidopsis thaliana]
           gi|26449808|dbj|BAC42027.1| putative receptor kinase
           [Arabidopsis thaliana] gi|224589583|gb|ACN59325.1|
           leucine-rich repeat receptor-like protein kinase
           [Arabidopsis thaliana] gi|332643925|gb|AEE77446.1|
           leucine-rich repeat protein kinase-like protein
           [Arabidopsis thaliana]
          Length = 605

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 43/81 (53%), Positives = 56/81 (69%), Gaps = 2/81 (2%)
 Frame = +2

Query: 80  LCSLLHGIF--SVVNSIEDDIRCLQGFKNSLKDPQNRLASWNFINTTAGAVCKYDGVTCW 253
           LC ++   F  SV+ + EDDIRCL+G K SL DPQN L SWNF NTT G +C + GV+CW
Sbjct: 14  LCFIIFLCFCSSVMAADEDDIRCLRGLKASLTDPQNALKSWNFDNTTLGFLCNFVGVSCW 73

Query: 254 SENEDRLIGIELLSMELGGEI 316
           +  E+R+I +EL  M L G+I
Sbjct: 74  NNQENRVINLELRDMGLSGKI 94


>emb|CBI35007.3| unnamed protein product [Vitis vinifera]
          Length = 578

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 44/96 (45%), Positives = 60/96 (62%), Gaps = 5/96 (5%)
 Frame = +2

Query: 44  LESHLAHDQNQSLCSLLHGIFSVVNSI-----EDDIRCLQGFKNSLKDPQNRLASWNFIN 208
           L S L H Q  SL  L   I   V        EDD++CL+G K SL DPQ +L+SW+F N
Sbjct: 13  LFSPLGHIQGCSLVLLTIVILCCVALFSAAVAEDDVKCLRGVKESLSDPQGKLSSWSFSN 72

Query: 209 TTAGAVCKYDGVTCWSENEDRLIGIELLSMELGGEI 316
            + G++CK+ GV CW++ E+R+ G+EL  M+L GEI
Sbjct: 73  ISVGSLCKFVGVACWNDRENRIFGLELPDMKLSGEI 108


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