BLASTX nr result

ID: Coptis24_contig00024409 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024409
         (747 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001237440.1| thioredoxin [Glycine max] gi|46326970|gb|AAS...   146   4e-33
gb|ACU15762.1| unknown [Glycine max]                                  146   4e-33
ref|NP_001236052.1| uncharacterized protein LOC100527691 [Glycin...   145   7e-33
ref|XP_002324032.1| thioredoxin h [Populus trichocarpa] gi|22286...   144   2e-32
ref|XP_003519128.1| PREDICTED: thioredoxin H2-like [Glycine max]      143   4e-32

>ref|NP_001237440.1| thioredoxin [Glycine max] gi|46326970|gb|AAS88427.1| thioredoxin
           [Glycine max]
          Length = 135

 Score =  146 bits (369), Expect = 4e-33
 Identities = 73/113 (64%), Positives = 87/113 (76%)
 Frame = -1

Query: 564 SKESCVRSFHTTYDWNKHLDNIKGSCQLMVIDFTASWCGPCKAIEPAFMELAAKFTDVIF 385
           S  S V+SFH++  W  H + +K + +L+VIDF+ASWCGPCK IEPA   ++ KFTDV F
Sbjct: 22  SSASRVQSFHSSARWQLHFNELKETNKLVVIDFSASWCGPCKFIEPAIHAMSEKFTDVDF 81

Query: 384 VKIDVDELMSVAGEFGVEAMPTFVLIKHGKKVDKLVGAKKNELEKMIEMHRVQ 226
           VKIDVDEL  VA EF VEAMPTFVL K GK+VDK+VGAKK+ELEK IE HR Q
Sbjct: 82  VKIDVDELPDVAKEFNVEAMPTFVLCKKGKEVDKVVGAKKDELEKKIEKHRSQ 134


>gb|ACU15762.1| unknown [Glycine max]
          Length = 157

 Score =  146 bits (369), Expect = 4e-33
 Identities = 73/113 (64%), Positives = 87/113 (76%)
 Frame = -1

Query: 564 SKESCVRSFHTTYDWNKHLDNIKGSCQLMVIDFTASWCGPCKAIEPAFMELAAKFTDVIF 385
           S  S V+SFH++  W  H + +K + +L+VIDF+ASWCGPCK IEPA   ++ KFTDV F
Sbjct: 44  SSASRVQSFHSSARWQLHFNELKETNKLVVIDFSASWCGPCKFIEPAIHAMSEKFTDVDF 103

Query: 384 VKIDVDELMSVAGEFGVEAMPTFVLIKHGKKVDKLVGAKKNELEKMIEMHRVQ 226
           VKIDVDEL  VA EF VEAMPTFVL K GK+VDK+VGAKK+ELEK IE HR Q
Sbjct: 104 VKIDVDELPDVAKEFNVEAMPTFVLCKKGKEVDKVVGAKKDELEKKIEKHRSQ 156


>ref|NP_001236052.1| uncharacterized protein LOC100527691 [Glycine max]
           gi|255632962|gb|ACU16835.1| unknown [Glycine max]
          Length = 126

 Score =  145 bits (367), Expect = 7e-33
 Identities = 75/137 (54%), Positives = 93/137 (67%)
 Frame = -1

Query: 642 MGSDYSTFPTVSNYYTSMPTRSYNGSSKESCVRSFHTTYDWNKHLDNIKGSCQLMVIDFT 463
           MG+++STF  V              SS  S V +FH+T  W  H D  K + +LMVIDFT
Sbjct: 1   MGANFSTFEFVEK------------SSHSSLVLTFHSTAKWKAHFDASKETNKLMVIDFT 48

Query: 462 ASWCGPCKAIEPAFMELAAKFTDVIFVKIDVDELMSVAGEFGVEAMPTFVLIKHGKKVDK 283
           A+WCGPCK ++P   E AAK+TDV F+KIDVDELM VA  F V+AMPTF+LIK GK V+K
Sbjct: 49  ATWCGPCKYMDPIIKEFAAKYTDVEFIKIDVDELMEVAEAFQVQAMPTFILIKKGKVVEK 108

Query: 282 LVGAKKNELEKMIEMHR 232
           +VGAKK EL+K+IE  R
Sbjct: 109 VVGAKKEELQKLIEKRR 125


>ref|XP_002324032.1| thioredoxin h [Populus trichocarpa] gi|222867034|gb|EEF04165.1|
           thioredoxin h [Populus trichocarpa]
          Length = 131

 Score =  144 bits (363), Expect = 2e-32
 Identities = 69/114 (60%), Positives = 87/114 (76%)
 Frame = -1

Query: 573 NGSSKESCVRSFHTTYDWNKHLDNIKGSCQLMVIDFTASWCGPCKAIEPAFMELAAKFTD 394
           + S  +S V +FH++  W  H ++IK + QLMVIDF ASWCGPCK +EPA   +AAKFTD
Sbjct: 18  SASDGQSGVTAFHSSARWQLHFNSIKNTNQLMVIDFAASWCGPCKHMEPAVHAMAAKFTD 77

Query: 393 VIFVKIDVDELMSVAGEFGVEAMPTFVLIKHGKKVDKLVGAKKNELEKMIEMHR 232
           V F KIDVDEL  VA EFGV+AMPTFVL+K G +VD++VGA+K EL++ IE HR
Sbjct: 78  VQFAKIDVDELPDVAQEFGVQAMPTFVLVKKGNEVDRVVGAQKEELQRKIEKHR 131


>ref|XP_003519128.1| PREDICTED: thioredoxin H2-like [Glycine max]
          Length = 127

 Score =  143 bits (360), Expect = 4e-32
 Identities = 72/137 (52%), Positives = 91/137 (66%)
 Frame = -1

Query: 642 MGSDYSTFPTVSNYYTSMPTRSYNGSSKESCVRSFHTTYDWNKHLDNIKGSCQLMVIDFT 463
           MG+ +STF  V              S   S + +FH+T  W  H D  K + +LMVIDFT
Sbjct: 1   MGAKFSTFEFVEK-----------SSHSSSLILTFHSTAKWKAHFDVSKETNKLMVIDFT 49

Query: 462 ASWCGPCKAIEPAFMELAAKFTDVIFVKIDVDELMSVAGEFGVEAMPTFVLIKHGKKVDK 283
           A+WCGPCK ++P     AAK+TDV F+KIDVDELM VA  F V+AMPTF+LIK GK V+K
Sbjct: 50  ATWCGPCKYMDPIIKNFAAKYTDVEFIKIDVDELMEVAQAFQVQAMPTFILIKKGKVVEK 109

Query: 282 LVGAKKNELEKMIEMHR 232
           +VGAKK EL+K+I+ HR
Sbjct: 110 VVGAKKEELQKLIDKHR 126


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