BLASTX nr result

ID: Coptis24_contig00024403 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024403
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32696.3| unnamed protein product [Vitis vinifera]              150   8e-35
ref|XP_002279651.1| PREDICTED: probable beta-1,4-xylosyltransfer...   150   8e-35
gb|AAX33319.1| secondary cell wall-related glycosyltransferase f...   150   1e-34
ref|XP_002323456.1| glycosyl transferase [Populus trichocarpa] g...   150   1e-34
gb|ABP65661.1| secondary wall-associated glycosyltransferase fam...   148   4e-34

>emb|CBI32696.3| unnamed protein product [Vitis vinifera]
          Length = 292

 Score =  150 bits (380), Expect = 8e-35
 Identities = 73/107 (68%), Positives = 85/107 (79%)
 Frame = +1

Query: 1   AMVSANRKRVVVEGPVCDSFQVIGWHLVRNLFESSTNLGSLLHTSSFAFNSSILWDPERW 180
           A +SANR +V++EGPVCDS QVIGWHL +   E+ T   S LH S F+FNSSILWDPERW
Sbjct: 169 ASLSANRNKVIMEGPVCDSSQVIGWHLKKMNNETETR--SPLHISGFSFNSSILWDPERW 226

Query: 181 GRASSVQYTSQNSIKIVQEVVAEDETKIKALPQEDCSKILLWELHIP 321
           GR SSVQ  SQNSIK V+EV  EDE+K+K +PQEDCS+ILLW LHIP
Sbjct: 227 GRPSSVQDNSQNSIKFVKEVALEDESKLKGIPQEDCSRILLWNLHIP 273


>ref|XP_002279651.1| PREDICTED: probable beta-1,4-xylosyltransferase IRX9 [Vitis
           vinifera]
          Length = 357

 Score =  150 bits (380), Expect = 8e-35
 Identities = 73/107 (68%), Positives = 85/107 (79%)
 Frame = +1

Query: 1   AMVSANRKRVVVEGPVCDSFQVIGWHLVRNLFESSTNLGSLLHTSSFAFNSSILWDPERW 180
           A +SANR +V++EGPVCDS QVIGWHL +   E+ T   S LH S F+FNSSILWDPERW
Sbjct: 234 ASLSANRNKVIMEGPVCDSSQVIGWHLKKMNNETETR--SPLHISGFSFNSSILWDPERW 291

Query: 181 GRASSVQYTSQNSIKIVQEVVAEDETKIKALPQEDCSKILLWELHIP 321
           GR SSVQ  SQNSIK V+EV  EDE+K+K +PQEDCS+ILLW LHIP
Sbjct: 292 GRPSSVQDNSQNSIKFVKEVALEDESKLKGIPQEDCSRILLWNLHIP 338


>gb|AAX33319.1| secondary cell wall-related glycosyltransferase family 43 [Populus
           tremula x Populus tremuloides]
          Length = 356

 Score =  150 bits (379), Expect = 1e-34
 Identities = 70/108 (64%), Positives = 86/108 (79%)
 Frame = +1

Query: 1   AMVSANRKRVVVEGPVCDSFQVIGWHLVRNLFESSTNLGSLLHTSSFAFNSSILWDPERW 180
           A++SAN K+V++EGPVCDS QVIGWHL +    + T+    +H SSF FNSSILWDPERW
Sbjct: 236 ALLSANEKKVIIEGPVCDSSQVIGWHLRK--MNNETDKRPPIHISSFGFNSSILWDPERW 293

Query: 181 GRASSVQYTSQNSIKIVQEVVAEDETKIKALPQEDCSKILLWELHIPT 324
           GR SSVQ TSQNSIK V++V  EDETK+K +P EDCSKI+LW L++PT
Sbjct: 294 GRPSSVQQTSQNSIKFVKQVALEDETKLKGIPPEDCSKIMLWRLNLPT 341


>ref|XP_002323456.1| glycosyl transferase [Populus trichocarpa]
           gi|222868086|gb|EEF05217.1| glycosyl transferase
           [Populus trichocarpa] gi|333951813|gb|AEG25424.1|
           glycosyltransferase GT43B [Populus trichocarpa]
          Length = 357

 Score =  150 bits (379), Expect = 1e-34
 Identities = 70/108 (64%), Positives = 86/108 (79%)
 Frame = +1

Query: 1   AMVSANRKRVVVEGPVCDSFQVIGWHLVRNLFESSTNLGSLLHTSSFAFNSSILWDPERW 180
           A++SAN K+V++EGPVCDS QVIGWHL +    + T+    +H SSF FNSSILWDPERW
Sbjct: 237 ALLSANEKKVIIEGPVCDSSQVIGWHLRK--MNNETDKRPPIHISSFGFNSSILWDPERW 294

Query: 181 GRASSVQYTSQNSIKIVQEVVAEDETKIKALPQEDCSKILLWELHIPT 324
           GR SSVQ TSQNSIK V++V  EDETK+K +P EDCSKI+LW L++PT
Sbjct: 295 GRPSSVQQTSQNSIKFVKQVALEDETKLKGIPPEDCSKIMLWRLNLPT 342


>gb|ABP65661.1| secondary wall-associated glycosyltransferase family 43B [Populus
           tremula x Populus alba]
          Length = 356

 Score =  148 bits (374), Expect = 4e-34
 Identities = 70/108 (64%), Positives = 85/108 (78%)
 Frame = +1

Query: 1   AMVSANRKRVVVEGPVCDSFQVIGWHLVRNLFESSTNLGSLLHTSSFAFNSSILWDPERW 180
           A++SAN K+V+ EGPVCDS QVIGWHL +    + T+    +H SSF FNSSILWDPERW
Sbjct: 236 ALLSANEKKVISEGPVCDSSQVIGWHLRK--MNNETDKRPPIHISSFGFNSSILWDPERW 293

Query: 181 GRASSVQYTSQNSIKIVQEVVAEDETKIKALPQEDCSKILLWELHIPT 324
           GR SSVQ TSQNSIK V++V  EDETK+K +P EDCSKI+LW L++PT
Sbjct: 294 GRPSSVQQTSQNSIKFVKQVALEDETKLKGIPPEDCSKIMLWRLNLPT 341


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