BLASTX nr result

ID: Coptis24_contig00024398 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024398
         (1205 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002333406.1| predicted protein [Populus trichocarpa] gi|2...   109   9e-26
ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...   109   1e-25
ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|2...   108   2e-25
ref|XP_002317320.1| predicted protein [Populus trichocarpa] gi|2...   108   3e-25
ref|XP_002331734.1| predicted protein [Populus trichocarpa] gi|2...   106   1e-20

>ref|XP_002333406.1| predicted protein [Populus trichocarpa] gi|222836432|gb|EEE74839.1|
           predicted protein [Populus trichocarpa]
          Length = 1166

 Score =  109 bits (273), Expect(2) = 9e-26
 Identities = 60/168 (35%), Positives = 96/168 (57%), Gaps = 3/168 (1%)
 Frame = -3

Query: 933 PSYTDG-VALAPQ-DIIDESIEEWKDVLVGYFMEKRLAFPYVKSFLQKVWKLKGTMDI-T 763
           P+ TDG V +AP  D+ ++  E WK  LVG+F+ ++L +P V S  +++W   G  ++ +
Sbjct: 130 PTTTDGRVTVAPPLDVFEDGCEFWKSTLVGHFVGQKLPYPVVNSIAKRIWSSYGLSEVLS 189

Query: 762 IDGDLFFINFSVDEDKQMVLKGDPLFIAGKIFVIRPWSVEVEVLQNKTQTVPIWVKLPNV 583
            D   F  NF   +    VL+  P  +A +  V++ W   ++ L++    VP+WV+L NV
Sbjct: 190 SDNGFFIFNFDYVDHATNVLERAPWHMANRPLVLKRWQPNMQFLKDDLARVPVWVRLYNV 249

Query: 582 PKELRTLNGLSFLANLVGGPPCMDDATAKKEILSFAKVCVTIPSSDPL 439
           P E  T+ GLS +A+ VG P   D  T  ++ LS+A+VCV I +S  L
Sbjct: 250 PLEYWTIKGLSCVASAVGVPLHADHTTLLRKRLSYARVCVEIDASKTL 297



 Score =  109 bits (273), Expect(2) = 9e-26
 Identities = 60/168 (35%), Positives = 96/168 (57%), Gaps = 3/168 (1%)
 Frame = -3

Query: 933  PSYTDG-VALAPQ-DIIDESIEEWKDVLVGYFMEKRLAFPYVKSFLQKVWKLKGTMDI-T 763
            P+ TDG V +AP  D+ ++  E WK  LVG+F+ ++L +P V S  +++W   G  ++ +
Sbjct: 923  PTTTDGRVTVAPPLDVFEDGCEFWKSTLVGHFVGQKLPYPVVNSIAKRIWSSYGLSEVLS 982

Query: 762  IDGDLFFINFSVDEDKQMVLKGDPLFIAGKIFVIRPWSVEVEVLQNKTQTVPIWVKLPNV 583
             D   F  NF   +    VL+  P  +A +  V++ W   ++ L++    VP+WV+L NV
Sbjct: 983  SDNGFFIFNFDYVDHATNVLERAPWHMANRPLVLKRWQPNMQFLKDDLARVPVWVRLYNV 1042

Query: 582  PKELRTLNGLSFLANLVGGPPCMDDATAKKEILSFAKVCVTIPSSDPL 439
            P E  T+ GLS +A+ VG P   D  T  ++ LS+A+VCV I +S  L
Sbjct: 1043 PLEYWTIKGLSCVASAVGVPLHADHTTLLRKRLSYARVCVEIDASKTL 1090



 Score = 34.7 bits (78), Expect(2) = 9e-26
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = -2

Query: 382 EYSWKPPAYSKCNMFGHITSKCDNEVVNVWEPRAENSLN 266
           EY W P   S CN+FGH T+ C    ++  +  AE   N
Sbjct: 316 EYEWIPSKCSNCNVFGHTTALCATNNIDNLKVVAEGKRN 354



 Score = 34.7 bits (78), Expect(2) = 9e-26
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = -2

Query: 382  EYSWKPPAYSKCNMFGHITSKCDNEVVNVWEPRAENSLN 266
            EY W P   S CN+FGH T+ C    ++  +  AE   N
Sbjct: 1109 EYEWIPSKCSNCNVFGHTTALCATNNIDNLKVVAEGKRN 1147


>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
           predicted protein [Populus trichocarpa]
          Length = 1386

 Score =  109 bits (272), Expect(2) = 1e-25
 Identities = 60/168 (35%), Positives = 96/168 (57%), Gaps = 3/168 (1%)
 Frame = -3

Query: 933 PSYTDG-VALAPQ-DIIDESIEEWKDVLVGYFMEKRLAFPYVKSFLQKVWKLKGTMDI-T 763
           P+ TDG V +AP  D+ ++  E WK  LVG+F+ ++L +P V S  +++W   G  ++ +
Sbjct: 130 PTTTDGRVTVAPPLDVFEDGCEFWKSTLVGHFVGQKLPYPVVNSIAKRIWSSYGLSEVLS 189

Query: 762 IDGDLFFINFSVDEDKQMVLKGDPLFIAGKIFVIRPWSVEVEVLQNKTQTVPIWVKLPNV 583
            D   F  NF   +    VL+  P  +A +  V++ W   ++ L++    VP+WV+L NV
Sbjct: 190 SDNGFFIFNFDSVDHATNVLERAPWHMANRPLVLKRWQPNMQFLKDDLARVPVWVRLYNV 249

Query: 582 PKELRTLNGLSFLANLVGGPPCMDDATAKKEILSFAKVCVTIPSSDPL 439
           P E  T+ GLS +A+ VG P   D  T  ++ LS+A+VCV I +S  L
Sbjct: 250 PLEYWTIKGLSCVASAVGVPLHADHTTLLRKRLSYARVCVEIDASKTL 297



 Score = 34.7 bits (78), Expect(2) = 1e-25
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = -2

Query: 382 EYSWKPPAYSKCNMFGHITSKCDNEVVNVWEPRAENSLN 266
           EY W P   S CN+FGH T+ C    ++  +  AE   N
Sbjct: 316 EYEWIPSKCSNCNVFGHTTALCATNNIDNLKVVAEGKRN 354


>ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|222858226|gb|EEE95773.1|
           predicted protein [Populus trichocarpa]
          Length = 809

 Score =  108 bits (270), Expect(2) = 2e-25
 Identities = 59/168 (35%), Positives = 96/168 (57%), Gaps = 3/168 (1%)
 Frame = -3

Query: 933 PSYTDG-VALAPQ-DIIDESIEEWKDVLVGYFMEKRLAFPYVKSFLQKVWKLKGTMDI-T 763
           P+ TDG V +AP  D+ ++  E WK  LVG+F+ ++L +P V S  +++W   G  ++ +
Sbjct: 130 PTMTDGRVKVAPPLDVFEDGCEFWKSTLVGHFVGQKLPYPVVNSIAKRIWSSYGLSEVLS 189

Query: 762 IDGDLFFINFSVDEDKQMVLKGDPLFIAGKIFVIRPWSVEVEVLQNKTQTVPIWVKLPNV 583
            D   F  NF   +    VL+  P  +A +  V++ W   ++ L++    VP+WV+L NV
Sbjct: 190 SDNGFFIFNFDSVDHATNVLERAPWHMANRPLVLKRWQPNMQFLKDDFARVPVWVRLYNV 249

Query: 582 PKELRTLNGLSFLANLVGGPPCMDDATAKKEILSFAKVCVTIPSSDPL 439
           P E  T+ GLS +A+ +G P   D  T  ++ LS+A+VCV I +S  L
Sbjct: 250 PLEYWTIKGLSCVASAIGVPLHADHTTLLRKRLSYARVCVEIDASKTL 297



 Score = 34.7 bits (78), Expect(2) = 2e-25
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = -2

Query: 382 EYSWKPPAYSKCNMFGHITSKCDNEVVNVWEPRAENSLN 266
           EY W P   S CN+FGH T+ C    ++  +  AE   N
Sbjct: 316 EYEWIPSKCSNCNVFGHTTALCATNNIDNLKVVAEGKRN 354


>ref|XP_002317320.1| predicted protein [Populus trichocarpa] gi|222860385|gb|EEE97932.1|
           predicted protein [Populus trichocarpa]
          Length = 761

 Score =  108 bits (269), Expect(2) = 3e-25
 Identities = 60/168 (35%), Positives = 95/168 (56%), Gaps = 3/168 (1%)
 Frame = -3

Query: 933 PSYTDG-VALAPQ-DIIDESIEEWKDVLVGYFMEKRLAFPYVKSFLQKVWKLKGTMDI-T 763
           P+ TDG V +AP  D+ ++  E WK  LVG+FM ++L +P V S  +++W   G +++ +
Sbjct: 130 PTMTDGRVTVAPPLDVFEDGCEFWKSTLVGHFMGQKLPYPVVNSIAKRIWSSYGLLEVLS 189

Query: 762 IDGDLFFINFSVDEDKQMVLKGDPLFIAGKIFVIRPWSVEVEVLQNKTQTVPIWVKLPNV 583
            D   F  NF   +    VL+  P  +A    V++ W   ++ L++    VP+WV L NV
Sbjct: 190 SDNGFFIFNFDSVDRATNVLERAPWHMANMPLVLKRWQPNMQFLKDDLARVPVWVWLYNV 249

Query: 582 PKELRTLNGLSFLANLVGGPPCMDDATAKKEILSFAKVCVTIPSSDPL 439
           P E  T+ GLS +A+ +G P   D  T  ++ LS+A+VCV I +S  L
Sbjct: 250 PLEYWTIKGLSCVASAIGVPLHADHTTFLRKRLSYARVCVEIDASKTL 297



 Score = 34.3 bits (77), Expect(2) = 3e-25
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = -2

Query: 382 EYSWKPPAYSKCNMFGHITSKCDNEVVNVWEPRAENSLN 266
           EY W P   S CN+FGH  + C    +N  +  AE   N
Sbjct: 316 EYEWIPSKCSNCNVFGHTRTLCATNNINNLKVVAEGKRN 354


>ref|XP_002331734.1| predicted protein [Populus trichocarpa] gi|222874137|gb|EEF11268.1|
           predicted protein [Populus trichocarpa]
          Length = 557

 Score =  106 bits (265), Expect = 1e-20
 Identities = 54/162 (33%), Positives = 89/162 (54%), Gaps = 1/162 (0%)
 Frame = -3

Query: 921 DGVALAPQDIIDESIEEWKDVLVGYFMEKRLAFPYVKSFLQKVWKLKGTMDI-TIDGDLF 745
           D     P D+ ++  E WK  LVG+F+ ++L +P V S  +++W   G  ++ + D   F
Sbjct: 110 DNEVAPPLDVFEDGCEFWKSTLVGHFVGQKLPYPVVNSIAKRIWSSYGLSEVLSSDNGFF 169

Query: 744 FINFSVDEDKQMVLKGDPLFIAGKIFVIRPWSVEVEVLQNKTQTVPIWVKLPNVPKELRT 565
             NF   +    VL+  P  +A +  V++ W   ++ L++    VP+WV+L NVP E  T
Sbjct: 170 IFNFDFVDHATNVLERAPWHMANRPLVLKRWQPNMQFLKDDLARVPVWVRLYNVPLEYWT 229

Query: 564 LNGLSFLANLVGGPPCMDDATAKKEILSFAKVCVTIPSSDPL 439
           + GLS +A+ +G P   D  T  ++ LS+A+VCV I +S  L
Sbjct: 230 IKGLSCVASAIGVPLHADHTTLLRKRLSYARVCVEIDASKTL 271


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