BLASTX nr result

ID: Coptis24_contig00024390 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024390
         (612 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38018.3| unnamed protein product [Vitis vinifera]              372   e-101
ref|XP_002274534.1| PREDICTED: DNA replication licensing factor ...   372   e-101
ref|XP_003537854.1| PREDICTED: DNA replication licensing factor ...   364   6e-99
ref|XP_003540982.1| PREDICTED: DNA replication licensing factor ...   363   2e-98
ref|XP_002512966.1| DNA replication licensing factor MCM4, putat...   363   2e-98

>emb|CBI38018.3| unnamed protein product [Vitis vinifera]
          Length = 834

 Score =  372 bits (954), Expect = e-101
 Identities = 188/204 (92%), Positives = 196/204 (96%)
 Frame = +1

Query: 1    ALVLSDRGICCIDEFDKMSENARSMLHEVMEQQTVSIAKAGIIASLNARTSVLACANPSG 180
            ALVLSDRGICCIDEFDKMS+NARSMLHEVMEQQTVSIAKAGIIASLNARTSVLACANPSG
Sbjct: 526  ALVLSDRGICCIDEFDKMSDNARSMLHEVMEQQTVSIAKAGIIASLNARTSVLACANPSG 585

Query: 181  SRYNPRLSVIDNIHLPPTLLSRFDLIYLMLDKADEHMDRRLAKHIVALHFENPETVQQDV 360
            SRYNPRLSVIDNIHLPPTLLSRFDLIYL+LDKADE  DRRLAKHIVALHFENPE+++QDV
Sbjct: 586  SRYNPRLSVIDNIHLPPTLLSRFDLIYLILDKADEQTDRRLAKHIVALHFENPESLEQDV 645

Query: 361  LDIPTLTAYLSYARRHIRPKLSDEAAEELIRRYVEMRRRGNFPGSSKKVITATPRQIESL 540
            LD+PTLTAY+SYAR+HI PKLSDEAAEEL R YVEMRRRGNFPGSSKKVITATPRQIESL
Sbjct: 646  LDLPTLTAYVSYARKHIHPKLSDEAAEELTRGYVEMRRRGNFPGSSKKVITATPRQIESL 705

Query: 541  IRLSEALARIRFSEWVEKPDVAEA 612
            IRL EALARIRFSEWVEK DV EA
Sbjct: 706  IRLGEALARIRFSEWVEKRDVMEA 729


>ref|XP_002274534.1| PREDICTED: DNA replication licensing factor MCM4 [Vitis vinifera]
          Length = 840

 Score =  372 bits (954), Expect = e-101
 Identities = 188/204 (92%), Positives = 196/204 (96%)
 Frame = +1

Query: 1    ALVLSDRGICCIDEFDKMSENARSMLHEVMEQQTVSIAKAGIIASLNARTSVLACANPSG 180
            ALVLSDRGICCIDEFDKMS+NARSMLHEVMEQQTVSIAKAGIIASLNARTSVLACANPSG
Sbjct: 532  ALVLSDRGICCIDEFDKMSDNARSMLHEVMEQQTVSIAKAGIIASLNARTSVLACANPSG 591

Query: 181  SRYNPRLSVIDNIHLPPTLLSRFDLIYLMLDKADEHMDRRLAKHIVALHFENPETVQQDV 360
            SRYNPRLSVIDNIHLPPTLLSRFDLIYL+LDKADE  DRRLAKHIVALHFENPE+++QDV
Sbjct: 592  SRYNPRLSVIDNIHLPPTLLSRFDLIYLILDKADEQTDRRLAKHIVALHFENPESLEQDV 651

Query: 361  LDIPTLTAYLSYARRHIRPKLSDEAAEELIRRYVEMRRRGNFPGSSKKVITATPRQIESL 540
            LD+PTLTAY+SYAR+HI PKLSDEAAEEL R YVEMRRRGNFPGSSKKVITATPRQIESL
Sbjct: 652  LDLPTLTAYVSYARKHIHPKLSDEAAEELTRGYVEMRRRGNFPGSSKKVITATPRQIESL 711

Query: 541  IRLSEALARIRFSEWVEKPDVAEA 612
            IRL EALARIRFSEWVEK DV EA
Sbjct: 712  IRLGEALARIRFSEWVEKRDVMEA 735


>ref|XP_003537854.1| PREDICTED: DNA replication licensing factor mcm4-B-like [Glycine max]
          Length = 835

 Score =  364 bits (935), Expect = 6e-99
 Identities = 185/204 (90%), Positives = 194/204 (95%)
 Frame = +1

Query: 1    ALVLSDRGICCIDEFDKMSENARSMLHEVMEQQTVSIAKAGIIASLNARTSVLACANPSG 180
            ALVLSDRGICCIDEFDKMS+NARSMLHEVMEQQTVSIAKAGIIASLNARTSVLACANPSG
Sbjct: 527  ALVLSDRGICCIDEFDKMSDNARSMLHEVMEQQTVSIAKAGIIASLNARTSVLACANPSG 586

Query: 181  SRYNPRLSVIDNIHLPPTLLSRFDLIYLMLDKADEHMDRRLAKHIVALHFENPETVQQDV 360
            SRYNPRLSVIDNIHLPPTLLSRFDLIYLMLDKADE  DRRLAKHIV+LHFENPE V+QDV
Sbjct: 587  SRYNPRLSVIDNIHLPPTLLSRFDLIYLMLDKADEQTDRRLAKHIVSLHFENPENVEQDV 646

Query: 361  LDIPTLTAYLSYARRHIRPKLSDEAAEELIRRYVEMRRRGNFPGSSKKVITATPRQIESL 540
            LDI TLT Y+SYAR+HI P+LSDEAAEEL R YVE+R+RGNFPGSSKKVITATPRQIESL
Sbjct: 647  LDISTLTDYVSYARKHIHPQLSDEAAEELTRGYVEIRKRGNFPGSSKKVITATPRQIESL 706

Query: 541  IRLSEALARIRFSEWVEKPDVAEA 612
            IRLSEALAR+RFSEWVEK DV EA
Sbjct: 707  IRLSEALARMRFSEWVEKHDVMEA 730


>ref|XP_003540982.1| PREDICTED: DNA replication licensing factor mcm4-B-like [Glycine max]
          Length = 839

 Score =  363 bits (931), Expect = 2e-98
 Identities = 185/204 (90%), Positives = 193/204 (94%)
 Frame = +1

Query: 1    ALVLSDRGICCIDEFDKMSENARSMLHEVMEQQTVSIAKAGIIASLNARTSVLACANPSG 180
            ALVLSDRGICCIDEFDKMS+NARSMLHEVMEQQTVSIAKAGIIASLNARTSVLACANPSG
Sbjct: 531  ALVLSDRGICCIDEFDKMSDNARSMLHEVMEQQTVSIAKAGIIASLNARTSVLACANPSG 590

Query: 181  SRYNPRLSVIDNIHLPPTLLSRFDLIYLMLDKADEHMDRRLAKHIVALHFENPETVQQDV 360
            SRYNPRLSVIDNIHLPPTLLSRFDLIYLMLDKA E  DRRLAKHIV+LHFENPE V+QDV
Sbjct: 591  SRYNPRLSVIDNIHLPPTLLSRFDLIYLMLDKAHEQTDRRLAKHIVSLHFENPENVEQDV 650

Query: 361  LDIPTLTAYLSYARRHIRPKLSDEAAEELIRRYVEMRRRGNFPGSSKKVITATPRQIESL 540
            LDI TLT Y+SYARRHI P+LSDEAAEEL R YVE+R+RGNFPGSSKKVITATPRQIESL
Sbjct: 651  LDISTLTDYVSYARRHIHPQLSDEAAEELTRGYVEIRKRGNFPGSSKKVITATPRQIESL 710

Query: 541  IRLSEALARIRFSEWVEKPDVAEA 612
            IRLSEALAR+RFSEWVEK DV EA
Sbjct: 711  IRLSEALARMRFSEWVEKHDVMEA 734


>ref|XP_002512966.1| DNA replication licensing factor MCM4, putative [Ricinus communis]
            gi|223547977|gb|EEF49469.1| DNA replication licensing
            factor MCM4, putative [Ricinus communis]
          Length = 867

 Score =  363 bits (931), Expect = 2e-98
 Identities = 185/204 (90%), Positives = 192/204 (94%)
 Frame = +1

Query: 1    ALVLSDRGICCIDEFDKMSENARSMLHEVMEQQTVSIAKAGIIASLNARTSVLACANPSG 180
            ALVLSDRGICCIDEFDKMSENARSMLHEVMEQQT+SIAKAGIIASLNARTSVLACANP G
Sbjct: 559  ALVLSDRGICCIDEFDKMSENARSMLHEVMEQQTISIAKAGIIASLNARTSVLACANPIG 618

Query: 181  SRYNPRLSVIDNIHLPPTLLSRFDLIYLMLDKADEHMDRRLAKHIVALHFENPETVQQDV 360
            SRYNPRLSVIDNIHLPP+LLSRFDLIYL+LDKADE  DR LAKHIV+LHFENPE+ Q +V
Sbjct: 619  SRYNPRLSVIDNIHLPPSLLSRFDLIYLILDKADEQTDRHLAKHIVSLHFENPESAQHNV 678

Query: 361  LDIPTLTAYLSYARRHIRPKLSDEAAEELIRRYVEMRRRGNFPGSSKKVITATPRQIESL 540
            LDI TLTAYLSYAR+HI PKLSDEAAEEL R YVEMRRRGNFPGSSKKVITATPRQIESL
Sbjct: 679  LDIATLTAYLSYARKHIHPKLSDEAAEELTRGYVEMRRRGNFPGSSKKVITATPRQIESL 738

Query: 541  IRLSEALARIRFSEWVEKPDVAEA 612
            IRLSEALARIRFSEWVEK DV EA
Sbjct: 739  IRLSEALARIRFSEWVEKHDVIEA 762


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