BLASTX nr result

ID: Coptis24_contig00024389 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024389
         (620 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277068.1| PREDICTED: NAC domain-containing protein 100...   108   8e-22
emb|CBI29917.3| unnamed protein product [Vitis vinifera]              108   8e-22
ref|XP_002325402.1| NAC domain protein, IPR003441 [Populus trich...   101   9e-20
ref|XP_002525465.1| NAC domain-containing protein 21/22, putativ...    79   9e-13
ref|XP_002514736.1| NAC domain-containing protein 21/22, putativ...    71   1e-10

>ref|XP_002277068.1| PREDICTED: NAC domain-containing protein 100-like [Vitis vinifera]
          Length = 403

 Score =  108 bits (270), Expect = 8e-22
 Identities = 85/194 (43%), Positives = 100/194 (51%), Gaps = 15/194 (7%)
 Frame = +1

Query: 82  NDDNKFNGTPRTSSLLRTTDGNH----FSHFTNSEDSNFHQQDKKNFTLSTN-------- 225
           N +++F G     S  R +DGNH    FS   N       QQD+K+F LS N        
Sbjct: 215 NGEDEFKG-----SSTRFSDGNHHYPYFSPTINGHQLQ-KQQDQKSFLLSPNNVHTTSNY 268

Query: 226 YTLASNNSPSS--YSHTPFSNPFFFLPRSSNSGYLQQEMNSLVPSLRSSGITNPDQAILR 399
               SN +P+S  Y     SNP F    S    Y   +M S  PS   SG    D     
Sbjct: 269 QATLSNPTPNSIFYPQVSPSNPLFPFQASPTPSYSHWQMGSSFPSFPGSGFKGSDPTST- 327

Query: 400 ALAVTSGTCDSKRQLKVEQFSSNQSMVSLSQDTGLSTDITTEISSMASKH-DMGASMPYE 576
             A TSG    +RQ KVEQFSSNQSMVSLSQDTGLSTD+ TEISS+ SKH D G +  YE
Sbjct: 328 VRAQTSGV---QRQCKVEQFSSNQSMVSLSQDTGLSTDMNTEISSVLSKHQDTGNNRSYE 384

Query: 577 DFECPSSAGPVVDL 618
           D + P S G + DL
Sbjct: 385 DLQGP-SVGQIGDL 397


>emb|CBI29917.3| unnamed protein product [Vitis vinifera]
          Length = 390

 Score =  108 bits (270), Expect = 8e-22
 Identities = 85/194 (43%), Positives = 100/194 (51%), Gaps = 15/194 (7%)
 Frame = +1

Query: 82  NDDNKFNGTPRTSSLLRTTDGNH----FSHFTNSEDSNFHQQDKKNFTLSTN-------- 225
           N +++F G     S  R +DGNH    FS   N       QQD+K+F LS N        
Sbjct: 202 NGEDEFKG-----SSTRFSDGNHHYPYFSPTINGHQLQ-KQQDQKSFLLSPNNVHTTSNY 255

Query: 226 YTLASNNSPSS--YSHTPFSNPFFFLPRSSNSGYLQQEMNSLVPSLRSSGITNPDQAILR 399
               SN +P+S  Y     SNP F    S    Y   +M S  PS   SG    D     
Sbjct: 256 QATLSNPTPNSIFYPQVSPSNPLFPFQASPTPSYSHWQMGSSFPSFPGSGFKGSDPTST- 314

Query: 400 ALAVTSGTCDSKRQLKVEQFSSNQSMVSLSQDTGLSTDITTEISSMASKH-DMGASMPYE 576
             A TSG    +RQ KVEQFSSNQSMVSLSQDTGLSTD+ TEISS+ SKH D G +  YE
Sbjct: 315 VRAQTSGV---QRQCKVEQFSSNQSMVSLSQDTGLSTDMNTEISSVLSKHQDTGNNRSYE 371

Query: 577 DFECPSSAGPVVDL 618
           D + P S G + DL
Sbjct: 372 DLQGP-SVGQIGDL 384


>ref|XP_002325402.1| NAC domain protein, IPR003441 [Populus trichocarpa]
           gi|222862277|gb|EEE99783.1| NAC domain protein,
           IPR003441 [Populus trichocarpa]
          Length = 367

 Score =  101 bits (252), Expect = 9e-20
 Identities = 80/196 (40%), Positives = 112/196 (57%), Gaps = 8/196 (4%)
 Frame = +1

Query: 55  RPSPSFIHNNDDNKFNGTPRTSSLLRTTDGNHFSHFTNSEDSNFHQQDKKNFTLSTNYTL 234
           RPS S     D+N+F          R++DGN+FS+ T+  ++N      +NF    N   
Sbjct: 180 RPSTSSFSGGDNNEFK-----EMATRSSDGNYFSN-TSMLNNN------QNFAQPPNTNY 227

Query: 235 ASNNSPSSYSHTPFSNPFFFLPRSSNS-GYLQQEMNSL--VPSLRSSGITNPDQAILRAL 405
            + NS S +   P SNP +    S N  GYL Q  +S     + ++S  ++ +  +LR+L
Sbjct: 228 QAPNS-SFHPQIPASNPLYTFQTSPNMPGYLHQGKSSSNSFQNFQNSIFSDNEHTLLRSL 286

Query: 406 AVTSGTCDS--KRQLKVEQFSSNQSMVSLSQDTGLSTDI--TTEISSMASKHDMGA-SMP 570
           A  S    S  ++Q KVE+FSSNQSMVSLSQDTGLSTD+  T EISS+ SK ++G+    
Sbjct: 287 ARNSYREASGLEKQCKVERFSSNQSMVSLSQDTGLSTDVNTTAEISSVVSKQEIGSHDKV 346

Query: 571 YEDFECPSSAGPVVDL 618
           +ED E P SAGP+ DL
Sbjct: 347 FEDLEGP-SAGPIADL 361


>ref|XP_002525465.1| NAC domain-containing protein 21/22, putative [Ricinus communis]
           gi|223535278|gb|EEF36955.1| NAC domain-containing
           protein 21/22, putative [Ricinus communis]
          Length = 382

 Score = 78.6 bits (192), Expect = 9e-13
 Identities = 73/200 (36%), Positives = 102/200 (51%), Gaps = 9/200 (4%)
 Frame = +1

Query: 46  NTGRPSPSFIHNNDDNKFNGTPRTSSLLRTTDGNHFSHFTNSEDSNFHQQDKKNFTLSTN 225
           N+ RPS SF   +DD K       +   RT DGN+ S F+ +  +N +Q    +   +++
Sbjct: 203 NSSRPSSSFNSGDDDFK-------AMTSRTMDGNYLSQFSTTMVTNHNQNYFHHQPSNSS 255

Query: 226 YTLASNNSPSS--YSHTPFSNPFFFLPRSSNSGYLQQEMNSLVPSLRSSGITNPDQAILR 399
           Y       PSS  Y   P S  F   P  S +GY Q           +S     DQ +LR
Sbjct: 256 Y----QQQPSSIFYPQIP-SFTFQTTPNMSAAGYFQ-----------NSTFGANDQTLLR 299

Query: 400 ALAVTSGTCDSKRQ--LKVEQFSSNQSMVSLSQDTGLSTDITT--EISS-MASKHDMGA- 561
           ALA  +    S+++   KVEQFSSN SM +LSQDTGLSTD+ T  EISS + S+ ++G+ 
Sbjct: 300 ALAGNTRIEPSRQEKLCKVEQFSSNHSMATLSQDTGLSTDVNTAAEISSVVVSEQEIGSN 359

Query: 562 SMPYEDF-ECPSSAGPVVDL 618
           +  Y D  + PSS   +  L
Sbjct: 360 NKVYNDLDQGPSSVADLDSL 379


>ref|XP_002514736.1| NAC domain-containing protein 21/22, putative [Ricinus communis]
           gi|223546340|gb|EEF47842.1| NAC domain-containing
           protein 21/22, putative [Ricinus communis]
          Length = 361

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 55/177 (31%), Positives = 88/177 (49%), Gaps = 4/177 (2%)
 Frame = +1

Query: 100 NGTPRTSSLLRTTDGNHFSHFTNSEDSNFHQQDKKNFTLSTNYTLA-SNNSPSSYSHTPF 276
           + +P T       +  +   F+N  D   +QQ+  +   + +  L+ S+NS   +   PF
Sbjct: 198 DSSPYTGKTKPVAESAYVPCFSNPIDIQRNQQESIDTAFNHHQLLSVSSNSCDIFPRFPF 257

Query: 277 SNPFFF---LPRSSNSGYLQQEMNSLVPSLRSSGITNPDQAILRALAVTSGTCDSKRQLK 447
            N F+    LP S+N  Y             SSG + P+ +ILR L    G+      +K
Sbjct: 258 PNSFYSTQSLPLSANLQY------------PSSG-SIPENSILRVLVENQGS-----NVK 299

Query: 448 VEQFSSNQSMVSLSQDTGLSTDITTEISSMASKHDMGASMPYEDFECPSSAGPVVDL 618
            + F + + M+S SQ+TGL+T++ TEISS+ S  +MG   P++D   PS+ G  VDL
Sbjct: 300 QQSFKTEREMISASQETGLTTEMNTEISSVISNLEMG-KRPFDDQGLPSTCGGAVDL 355


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