BLASTX nr result

ID: Coptis24_contig00024388 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024388
         (964 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266492.1| PREDICTED: histone deacetylase 9 [Vitis vini...   634   e-179
emb|CAN77816.1| hypothetical protein VITISV_020659 [Vitis vinifera]   634   e-179
ref|XP_002270071.2| PREDICTED: histone deacetylase 9-like [Vitis...   623   e-176
emb|CBI17064.3| unnamed protein product [Vitis vinifera]              623   e-176
ref|XP_003606237.1| Histone deacetylase [Medicago truncatula] gi...   622   e-176

>ref|XP_002266492.1| PREDICTED: histone deacetylase 9 [Vitis vinifera]
           gi|297734674|emb|CBI16725.3| unnamed protein product
           [Vitis vinifera]
          Length = 430

 Score =  634 bits (1634), Expect = e-179
 Identities = 297/320 (92%), Positives = 312/320 (97%)
 Frame = +1

Query: 1   KPHRLSMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSEDYVEFLHRINPDTQHLFTPE 180
           KPHRL MTHHLVLSY+LHKKMEIYRPHKAYPVELAQFHS DYVEFLHRI PDTQHLF+ E
Sbjct: 27  KPHRLCMTHHLVLSYELHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFSNE 86

Query: 181 MKRYNLGEDCPVFENLFEFCQMYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGF 360
           + RYNLGEDCPVFENLFEFCQ+YAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGF
Sbjct: 87  LARYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGF 146

Query: 361 CYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDKFFPGTG 540
           CYINDLVLGILELLK+HARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHK+GDKFFPGTG
Sbjct: 147 CYINDLVLGILELLKHHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKYGDKFFPGTG 206

Query: 541 DVKETGEREGKYYSINVPLKDGIDDSSFTRLFKIIIAKVVETYLPGVIVLQCGADSLAGD 720
           DVKETGEREGK+Y+INVPLKDGIDD+SFTRLFK IIAKVVETY PGVIVLQCGADSLAGD
Sbjct: 207 DVKETGEREGKFYAINVPLKDGIDDTSFTRLFKTIIAKVVETYQPGVIVLQCGADSLAGD 266

Query: 721 RLGCFNLSIDGHAECVKFVKKFNLPLLVTGGGGYTKENVARCWTVETGVLLDTDLPNEIP 900
           RLGCFNLSIDGHAECV+FVKKFNLPLLVTGGGGYTKENVARCWTVETGVLLDT+LPNEIP
Sbjct: 267 RLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGVLLDTELPNEIP 326

Query: 901 DNDYIKYFGPDYSLKIPNGN 960
           +N+YIKYF P+YSLKIPNG+
Sbjct: 327 ENEYIKYFAPEYSLKIPNGH 346


>emb|CAN77816.1| hypothetical protein VITISV_020659 [Vitis vinifera]
          Length = 430

 Score =  634 bits (1634), Expect = e-179
 Identities = 297/320 (92%), Positives = 312/320 (97%)
 Frame = +1

Query: 1   KPHRLSMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSEDYVEFLHRINPDTQHLFTPE 180
           KPHRL MTHHLVLSY+LHKKMEIYRPHKAYPVELAQFHS DYVEFLHRI PDTQHLF+ E
Sbjct: 27  KPHRLCMTHHLVLSYELHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFSNE 86

Query: 181 MKRYNLGEDCPVFENLFEFCQMYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGF 360
           + RYNLGEDCPVFENLFEFCQ+YAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGF
Sbjct: 87  LARYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGF 146

Query: 361 CYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDKFFPGTG 540
           CYINDLVLGILELLK+HARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHK+GDKFFPGTG
Sbjct: 147 CYINDLVLGILELLKHHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKYGDKFFPGTG 206

Query: 541 DVKETGEREGKYYSINVPLKDGIDDSSFTRLFKIIIAKVVETYLPGVIVLQCGADSLAGD 720
           DVKETGEREGK+Y+INVPLKDGIDD+SFTRLFK IIAKVVETY PGVIVLQCGADSLAGD
Sbjct: 207 DVKETGEREGKFYAINVPLKDGIDDTSFTRLFKTIIAKVVETYQPGVIVLQCGADSLAGD 266

Query: 721 RLGCFNLSIDGHAECVKFVKKFNLPLLVTGGGGYTKENVARCWTVETGVLLDTDLPNEIP 900
           RLGCFNLSIDGHAECV+FVKKFNLPLLVTGGGGYTKENVARCWTVETGVLLDT+LPNEIP
Sbjct: 267 RLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGVLLDTELPNEIP 326

Query: 901 DNDYIKYFGPDYSLKIPNGN 960
           +N+YIKYF P+YSLKIPNG+
Sbjct: 327 ENEYIKYFAPEYSLKIPNGH 346


>ref|XP_002270071.2| PREDICTED: histone deacetylase 9-like [Vitis vinifera]
          Length = 458

 Score =  623 bits (1606), Expect = e-176
 Identities = 292/320 (91%), Positives = 308/320 (96%)
 Frame = +1

Query: 1    KPHRLSMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSEDYVEFLHRINPDTQHLFTPE 180
            KPHRL MTHHLVLSY+LHKKMEIYRPHKAYPVELAQFHS DYVEFLHRI PDTQHLF  E
Sbjct: 55   KPHRLCMTHHLVLSYELHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFLNE 114

Query: 181  MKRYNLGEDCPVFENLFEFCQMYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGF 360
            + +YNLGEDCPVFENLFEFCQ+YAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGF
Sbjct: 115  LAKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGF 174

Query: 361  CYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDKFFPGTG 540
            CYINDLVLGILELLK+HARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHK+GD FFPGTG
Sbjct: 175  CYINDLVLGILELLKHHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKYGDMFFPGTG 234

Query: 541  DVKETGEREGKYYSINVPLKDGIDDSSFTRLFKIIIAKVVETYLPGVIVLQCGADSLAGD 720
            DVKE GEREGK+Y+INVPLKDGIDD+SFTRLFK IIAKVVE Y PGVIVLQCGADSLAGD
Sbjct: 235  DVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIAKVVEIYQPGVIVLQCGADSLAGD 294

Query: 721  RLGCFNLSIDGHAECVKFVKKFNLPLLVTGGGGYTKENVARCWTVETGVLLDTDLPNEIP 900
            RLGCFNLSIDGHAECV+ VKKFNLPLLVTGGGGYTKENVARCWTVETGVLLDT+LPNEIP
Sbjct: 295  RLGCFNLSIDGHAECVRIVKKFNLPLLVTGGGGYTKENVARCWTVETGVLLDTELPNEIP 354

Query: 901  DNDYIKYFGPDYSLKIPNGN 960
            +N+YIKYFGP++SLKIPNG+
Sbjct: 355  ENEYIKYFGPEHSLKIPNGH 374


>emb|CBI17064.3| unnamed protein product [Vitis vinifera]
          Length = 430

 Score =  623 bits (1606), Expect = e-176
 Identities = 292/320 (91%), Positives = 308/320 (96%)
 Frame = +1

Query: 1   KPHRLSMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSEDYVEFLHRINPDTQHLFTPE 180
           KPHRL MTHHLVLSY+LHKKMEIYRPHKAYPVELAQFHS DYVEFLHRI PDTQHLF  E
Sbjct: 27  KPHRLCMTHHLVLSYELHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFLNE 86

Query: 181 MKRYNLGEDCPVFENLFEFCQMYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGF 360
           + +YNLGEDCPVFENLFEFCQ+YAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGF
Sbjct: 87  LAKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGF 146

Query: 361 CYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDKFFPGTG 540
           CYINDLVLGILELLK+HARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHK+GD FFPGTG
Sbjct: 147 CYINDLVLGILELLKHHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKYGDMFFPGTG 206

Query: 541 DVKETGEREGKYYSINVPLKDGIDDSSFTRLFKIIIAKVVETYLPGVIVLQCGADSLAGD 720
           DVKE GEREGK+Y+INVPLKDGIDD+SFTRLFK IIAKVVE Y PGVIVLQCGADSLAGD
Sbjct: 207 DVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIAKVVEIYQPGVIVLQCGADSLAGD 266

Query: 721 RLGCFNLSIDGHAECVKFVKKFNLPLLVTGGGGYTKENVARCWTVETGVLLDTDLPNEIP 900
           RLGCFNLSIDGHAECV+ VKKFNLPLLVTGGGGYTKENVARCWTVETGVLLDT+LPNEIP
Sbjct: 267 RLGCFNLSIDGHAECVRIVKKFNLPLLVTGGGGYTKENVARCWTVETGVLLDTELPNEIP 326

Query: 901 DNDYIKYFGPDYSLKIPNGN 960
           +N+YIKYFGP++SLKIPNG+
Sbjct: 327 ENEYIKYFGPEHSLKIPNGH 346


>ref|XP_003606237.1| Histone deacetylase [Medicago truncatula]
           gi|355507292|gb|AES88434.1| Histone deacetylase
           [Medicago truncatula]
          Length = 430

 Score =  622 bits (1604), Expect = e-176
 Identities = 290/319 (90%), Positives = 306/319 (95%)
 Frame = +1

Query: 1   KPHRLSMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSEDYVEFLHRINPDTQHLFTPE 180
           KPHRL MTHHLVLSYDLHKKME+YRPHKAYPVELAQFHS DYVEFLHRI PDTQHLF+ E
Sbjct: 27  KPHRLCMTHHLVLSYDLHKKMEVYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFSDE 86

Query: 181 MKRYNLGEDCPVFENLFEFCQMYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGF 360
           + +YNLGEDCPVF+NLFEFCQMYAGGTIDAARRLNN+LCDIAINWAGGLHHAKKCEASGF
Sbjct: 87  LAKYNLGEDCPVFDNLFEFCQMYAGGTIDAARRLNNKLCDIAINWAGGLHHAKKCEASGF 146

Query: 361 CYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDKFFPGTG 540
           CYINDLVLGILELLK+H RVLYIDIDVHHGDGVEEAFYFTDRVMTVS HK+GD FFPGTG
Sbjct: 147 CYINDLVLGILELLKHHPRVLYIDIDVHHGDGVEEAFYFTDRVMTVSSHKYGDLFFPGTG 206

Query: 541 DVKETGEREGKYYSINVPLKDGIDDSSFTRLFKIIIAKVVETYLPGVIVLQCGADSLAGD 720
           D KE GEREGK+Y+INVPLKDGIDDSSFTRLFK II+KVVETY PG IVLQCGADSLAGD
Sbjct: 207 DAKEIGEREGKFYAINVPLKDGIDDSSFTRLFKTIISKVVETYQPGAIVLQCGADSLAGD 266

Query: 721 RLGCFNLSIDGHAECVKFVKKFNLPLLVTGGGGYTKENVARCWTVETGVLLDTDLPNEIP 900
           RLGCFNLSIDGHAECV+FVKKFN+PLLVTGGGGYTKENVARCWTVETGVLLDT+LPNEIP
Sbjct: 267 RLGCFNLSIDGHAECVRFVKKFNVPLLVTGGGGYTKENVARCWTVETGVLLDTELPNEIP 326

Query: 901 DNDYIKYFGPDYSLKIPNG 957
           +NDYIKYFGPD+SLKIPNG
Sbjct: 327 ENDYIKYFGPDFSLKIPNG 345


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