BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024387
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526121.1| WD-repeat protein, putative [Ricinus communi...   135   4e-30
ref|XP_002279575.1| PREDICTED: ribosome biogenesis protein WDR12...   134   6e-30
emb|CAN70824.1| hypothetical protein VITISV_042345 [Vitis vinifera]   134   6e-30
ref|XP_004149101.1| PREDICTED: ribosome biogenesis protein WDR12...   129   2e-28
ref|XP_002324109.1| predicted protein [Populus trichocarpa] gi|2...   129   3e-28

>ref|XP_002526121.1| WD-repeat protein, putative [Ricinus communis]
           gi|223534618|gb|EEF36315.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 401

 Score =  135 bits (339), Expect = 4e-30
 Identities = 66/96 (68%), Positives = 77/96 (80%)
 Frame = +2

Query: 53  KQVQVRFITKLKSPLKIPSTSIAIPSKSTRLDLSTIVNDFIKSGNNSHWERLPFDFLIDG 232
           +Q+Q RF+TKLK+P + PS +I IPS  TRL LSTIVN  +K+GN   WE  PFDFLIDG
Sbjct: 8   RQIQARFVTKLKAPYRAPSATITIPSNLTRLGLSTIVNSLLKAGN-PEWENCPFDFLIDG 66

Query: 233 ELVRMELEHFLLAKGISAEKILEVEYIKAAVPRKQE 340
           EL+R+ LE FLLAKGISAEKILE+EYIKA  PRKQE
Sbjct: 67  ELIRLSLEQFLLAKGISAEKILEIEYIKAVAPRKQE 102


>ref|XP_002279575.1| PREDICTED: ribosome biogenesis protein WDR12 homolog [Vitis
           vinifera] gi|296082215|emb|CBI21220.3| unnamed protein
           product [Vitis vinifera]
          Length = 438

 Score =  134 bits (338), Expect = 6e-30
 Identities = 69/98 (70%), Positives = 80/98 (81%)
 Frame = +2

Query: 47  STKQVQVRFITKLKSPLKIPSTSIAIPSKSTRLDLSTIVNDFIKSGNNSHWERLPFDFLI 226
           ++++VQVRF TKL+SP K P TSIAIPS  TR+ LS IVN+ +KSGN   W+  PFDFLI
Sbjct: 10  TSRRVQVRFTTKLQSPFKTPPTSIAIPSNLTRMGLSAIVNNLLKSGNPD-WKPEPFDFLI 68

Query: 227 DGELVRMELEHFLLAKGISAEKILEVEYIKAAVPRKQE 340
           DGELVRM LE FL+AKGISAEKILE+EYIKA  PRKQE
Sbjct: 69  DGELVRMSLEQFLIAKGISAEKILEIEYIKAVAPRKQE 106


>emb|CAN70824.1| hypothetical protein VITISV_042345 [Vitis vinifera]
          Length = 427

 Score =  134 bits (338), Expect = 6e-30
 Identities = 69/98 (70%), Positives = 80/98 (81%)
 Frame = +2

Query: 47  STKQVQVRFITKLKSPLKIPSTSIAIPSKSTRLDLSTIVNDFIKSGNNSHWERLPFDFLI 226
           ++++VQVRF TKL+SP K P TSIAIPS  TR+ LS IVN+ +KSGN   W+  PFDFLI
Sbjct: 10  TSRRVQVRFTTKLQSPFKTPPTSIAIPSNLTRMGLSAIVNNLLKSGNPD-WKPEPFDFLI 68

Query: 227 DGELVRMELEHFLLAKGISAEKILEVEYIKAAVPRKQE 340
           DGELVRM LE FL+AKGISAEKILE+EYIKA  PRKQE
Sbjct: 69  DGELVRMSLEQFLIAKGISAEKILEIEYIKAVAPRKQE 106


>ref|XP_004149101.1| PREDICTED: ribosome biogenesis protein WDR12 homolog [Cucumis
           sativus]
          Length = 434

 Score =  129 bits (325), Expect = 2e-28
 Identities = 64/98 (65%), Positives = 79/98 (80%)
 Frame = +2

Query: 47  STKQVQVRFITKLKSPLKIPSTSIAIPSKSTRLDLSTIVNDFIKSGNNSHWERLPFDFLI 226
           ++++VQVRFITKL +P K+P+ +IAIPS  TRL LST+VN+ + +GN   WE  PFDFLI
Sbjct: 10  TSRRVQVRFITKLIAPFKVPANAIAIPSNLTRLGLSTVVNNLLSAGN-PEWEEEPFDFLI 68

Query: 227 DGELVRMELEHFLLAKGISAEKILEVEYIKAAVPRKQE 340
           DGELVRM LE FLLAKGISAEK LE+EY KA  PR++E
Sbjct: 69  DGELVRMSLEKFLLAKGISAEKTLEIEYFKAVAPRREE 106


>ref|XP_002324109.1| predicted protein [Populus trichocarpa] gi|222867111|gb|EEF04242.1|
           predicted protein [Populus trichocarpa]
          Length = 433

 Score =  129 bits (323), Expect = 3e-28
 Identities = 64/96 (66%), Positives = 80/96 (83%)
 Frame = +2

Query: 53  KQVQVRFITKLKSPLKIPSTSIAIPSKSTRLDLSTIVNDFIKSGNNSHWERLPFDFLIDG 232
           ++VQVRFITKLK P K+P+TSIAIP+  TRL LSTIVN  +K+G++  WE  PFDFLIDG
Sbjct: 10  RRVQVRFITKLKPPFKVPNTSIAIPANLTRLGLSTIVNSLLKAGDDE-WESQPFDFLIDG 68

Query: 233 ELVRMELEHFLLAKGISAEKILEVEYIKAAVPRKQE 340
           ELVR+ LE FLLAKGISAEK+LE+EY +A V +K++
Sbjct: 69  ELVRLPLEQFLLAKGISAEKVLEIEYTRAVVLQKED 104