BLASTX nr result

ID: Coptis24_contig00024383 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024383
         (1005 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134172.1| PREDICTED: putative TrmH family tRNA/rRNA me...   365   7e-99
gb|AFI57511.1| NEP-TC [Solanum betaceum]                              362   1e-97
ref|XP_002278797.1| PREDICTED: uncharacterized protein LOC100252...   359   5e-97
gb|AFK35943.1| unknown [Medicago truncatula]                          352   8e-95
ref|XP_003609543.1| tRNA guanosine-2'-O-methyltransferase [Medic...   351   1e-94

>ref|XP_004134172.1| PREDICTED: putative TrmH family tRNA/rRNA methyltransferase-like
           [Cucumis sativus] gi|449495429|ref|XP_004159839.1|
           PREDICTED: putative TrmH family tRNA/rRNA
           methyltransferase-like [Cucumis sativus]
          Length = 218

 Score =  365 bits (938), Expect = 7e-99
 Identities = 177/215 (82%), Positives = 198/215 (92%)
 Frame = +2

Query: 125 IESTVVVHNIAKRHNVGTMARSATAFGVSELILVGRRDFNAFGSHGSTSHLRLRHFHSLN 304
           IES VVVHNIAKRHNVGTMARSATAFGVSELILVGRRDFNAFGSHGSTSHLR RHFHSL 
Sbjct: 3   IESYVVVHNIAKRHNVGTMARSATAFGVSELILVGRRDFNAFGSHGSTSHLRFRHFHSLL 62

Query: 305 EAQTYLKEKNFDICGVEITNDSLAVNQHPFRRSTAFLLGNEGTGLSAKECEICDFFVYIP 484
           +AQT+LKEK+ DICGVEIT++++AVNQHPF+RSTAFLLGNEGTGLSAKEC ICDFFVYIP
Sbjct: 63  DAQTFLKEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICDFFVYIP 122

Query: 485 QYGCGTASLNVTVAASIVLHHFGVWAGFSERTREGNKFVVAEKPVRQVRRNFCAETDESV 664
           QYG GTASLNVTVAASIVLHHFGVWAGF ER R+G+KF+VAE+PVRQV+RN+C ET+ES+
Sbjct: 123 QYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGSKFIVAERPVRQVKRNYCTETEESI 182

Query: 665 VEERKIKRENAFHGFFDENGTTDSSSNMLDTLFSD 769
           +EERK +RENA  GFFDE    +S+SN+LDTLF D
Sbjct: 183 MEERKSRRENASKGFFDEGMIDESASNLLDTLFID 217


>gb|AFI57511.1| NEP-TC [Solanum betaceum]
          Length = 221

 Score =  362 bits (928), Expect = 1e-97
 Identities = 168/220 (76%), Positives = 199/220 (90%)
 Frame = +2

Query: 110 ERMEKIESTVVVHNIAKRHNVGTMARSATAFGVSELILVGRRDFNAFGSHGSTSHLRLRH 289
           E  +K+ES V+VHNIAKRHNVGT+ARSATAFGVSE+ILVGRRDFNAFGSHGSTSH+R RH
Sbjct: 2   ENEKKLESFVLVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVRFRH 61

Query: 290 FHSLNEAQTYLKEKNFDICGVEITNDSLAVNQHPFRRSTAFLLGNEGTGLSAKECEICDF 469
           FHSL +A+T+LKE++ DICGVEIT +++A+N+HPF+RSTAFLLGNEGTGLS KECEICDF
Sbjct: 62  FHSLADAKTFLKERDCDICGVEITENAVAINEHPFKRSTAFLLGNEGTGLSTKECEICDF 121

Query: 470 FVYIPQYGCGTASLNVTVAASIVLHHFGVWAGFSERTREGNKFVVAEKPVRQVRRNFCAE 649
           FVYIPQYGCGTASLNVTVAASIVLH FGVWAGFSERTREGNKF+VAE+P +Q ++N+C E
Sbjct: 122 FVYIPQYGCGTASLNVTVAASIVLHQFGVWAGFSERTREGNKFIVAERPFKQAKKNYCME 181

Query: 650 TDESVVEERKIKRENAFHGFFDENGTTDSSSNMLDTLFSD 769
           T ESV EER++K+EN  +GFF++ G  +S SN+LDTLF D
Sbjct: 182 TSESVAEERRLKKENLSNGFFEDTGKEESPSNLLDTLFDD 221


>ref|XP_002278797.1| PREDICTED: uncharacterized protein LOC100252797 [Vitis vinifera]
           gi|147777374|emb|CAN73835.1| hypothetical protein
           VITISV_043470 [Vitis vinifera]
           gi|297736948|emb|CBI26149.3| unnamed protein product
           [Vitis vinifera]
          Length = 217

 Score =  359 bits (922), Expect = 5e-97
 Identities = 171/215 (79%), Positives = 198/215 (92%)
 Frame = +2

Query: 125 IESTVVVHNIAKRHNVGTMARSATAFGVSELILVGRRDFNAFGSHGSTSHLRLRHFHSLN 304
           +ES VVVHNIAKRHNVGT+ARSA+A GVSELILVGRRDFN+FGSHGSTSHLR RHFHSL 
Sbjct: 3   VESYVVVHNIAKRHNVGTLARSASALGVSELILVGRRDFNSFGSHGSTSHLRFRHFHSLL 62

Query: 305 EAQTYLKEKNFDICGVEITNDSLAVNQHPFRRSTAFLLGNEGTGLSAKECEICDFFVYIP 484
           +A+ +LKEK+ DICGVEIT++++AVNQHPF+RSTAFLLGNEGTGLS KECEICDFFVYIP
Sbjct: 63  DARHFLKEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSVKECEICDFFVYIP 122

Query: 485 QYGCGTASLNVTVAASIVLHHFGVWAGFSERTREGNKFVVAEKPVRQVRRNFCAETDESV 664
           QYG GTASLNVTVAASIVLHHFGVWAGFSER R+GNKFVVAE+P +QVRRN+C ET +S+
Sbjct: 123 QYGGGTASLNVTVAASIVLHHFGVWAGFSERIRDGNKFVVAERPAQQVRRNYCTETADSI 182

Query: 665 VEERKIKRENAFHGFFDENGTTDSSSNMLDTLFSD 769
           +EERKI+R+NA +GFFDE+G+ +S SN+LD LF D
Sbjct: 183 IEERKIRRQNASNGFFDESGSGESPSNLLDALFGD 217


>gb|AFK35943.1| unknown [Medicago truncatula]
          Length = 218

 Score =  352 bits (903), Expect = 8e-95
 Identities = 165/214 (77%), Positives = 196/214 (91%)
 Frame = +2

Query: 128 ESTVVVHNIAKRHNVGTMARSATAFGVSELILVGRRDFNAFGSHGSTSHLRLRHFHSLNE 307
           ES VVVHNIAKRHNVGT+ARSATAFGVSELILVGRRDFN+FG+HGS++HLR RHFHSL +
Sbjct: 4   ESYVVVHNIAKRHNVGTLARSATAFGVSELILVGRRDFNSFGNHGSSNHLRFRHFHSLQD 63

Query: 308 AQTYLKEKNFDICGVEITNDSLAVNQHPFRRSTAFLLGNEGTGLSAKECEICDFFVYIPQ 487
           A+ +LK+K+ DICGVEIT+D+L VNQHPF+++TAFLLGNEG+GLS KECEICDFFVYIPQ
Sbjct: 64  AKHFLKDKDCDICGVEITHDALPVNQHPFKKNTAFLLGNEGSGLSMKECEICDFFVYIPQ 123

Query: 488 YGCGTASLNVTVAASIVLHHFGVWAGFSERTREGNKFVVAEKPVRQVRRNFCAETDESVV 667
           YGCGTASLNVTVAASIVLH FGVWAGF+ER+R+GNKFVVAE+PV+  RRN+C ETD+SV+
Sbjct: 124 YGCGTASLNVTVAASIVLHQFGVWAGFAERSRDGNKFVVAERPVKHGRRNYCTETDDSVI 183

Query: 668 EERKIKRENAFHGFFDENGTTDSSSNMLDTLFSD 769
           EE + +RENA HGFF+E  +++SSSN+LD LF D
Sbjct: 184 EEHRARRENAAHGFFEEAESSNSSSNLLDALFVD 217


>ref|XP_003609543.1| tRNA guanosine-2'-O-methyltransferase [Medicago truncatula]
           gi|355510598|gb|AES91740.1| tRNA
           guanosine-2'-O-methyltransferase [Medicago truncatula]
          Length = 218

 Score =  351 bits (901), Expect = 1e-94
 Identities = 165/214 (77%), Positives = 197/214 (92%)
 Frame = +2

Query: 128 ESTVVVHNIAKRHNVGTMARSATAFGVSELILVGRRDFNAFGSHGSTSHLRLRHFHSLNE 307
           ES VVVHNIAKRHNVGT+ARSATAFGVSELILVGRRDFN+FG+HGS++HLR RHFHSL +
Sbjct: 4   ESYVVVHNIAKRHNVGTLARSATAFGVSELILVGRRDFNSFGNHGSSNHLRFRHFHSLQD 63

Query: 308 AQTYLKEKNFDICGVEITNDSLAVNQHPFRRSTAFLLGNEGTGLSAKECEICDFFVYIPQ 487
           A+ +LK+K+ DICGVEIT+D+L VNQHPF+++TAFLLGNEG+GLS KECEICDFFVYIPQ
Sbjct: 64  AKHFLKDKDCDICGVEITHDALPVNQHPFKKNTAFLLGNEGSGLSMKECEICDFFVYIPQ 123

Query: 488 YGCGTASLNVTVAASIVLHHFGVWAGFSERTREGNKFVVAEKPVRQVRRNFCAETDESVV 667
           YGCGTASLNVTVAASIVLH FGVWAGF+ER+R+GNKFVVAE+PV+  RRN+C ETD+SV+
Sbjct: 124 YGCGTASLNVTVAASIVLHQFGVWAGFAERSRDGNKFVVAERPVKHGRRNYCTETDDSVI 183

Query: 668 EERKIKRENAFHGFFDENGTTDSSSNMLDTLFSD 769
           EER+ +RENA +GFF+E  +++SSSN+LD LF D
Sbjct: 184 EERRARRENAANGFFEEAESSNSSSNLLDALFVD 217


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