BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024381
         (205 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD63142.1| Retrotransposon gag protein [Asparagus officinalis]     68   7e-10
ref|XP_003631849.1| PREDICTED: uncharacterized protein LOC100259...    67   2e-09
emb|CAN78232.1| hypothetical protein VITISV_027465 [Vitis vinifera]    67   2e-09
gb|ABG37658.1| integrase [Populus trichocarpa]                         67   2e-09
emb|CAN81739.1| hypothetical protein VITISV_009673 [Vitis vinifera]    65   6e-09

>gb|ABD63142.1| Retrotransposon gag protein [Asparagus officinalis]
          Length = 1788

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 31/68 (45%), Positives = 43/68 (63%), Gaps = 5/68 (7%)
 Frame = +2

Query: 17  APVNNVDAPSYLLCDSLDHVIDNCP-----GVTAQVNAFNSYQKPGNNPFSNTYNPGWRN 181
           A +N++ AP    C S  HV + CP         Q+NA  ++Q+P N+PFS TYNPGWRN
Sbjct: 190 AQINHISAPGCHNCQSPTHVSEECPLLGNNHALEQMNA--AFQRPRNDPFSPTYNPGWRN 247

Query: 182 HPNLSWSK 205
           HPN +W++
Sbjct: 248 HPNFAWNQ 255


>ref|XP_003631849.1| PREDICTED: uncharacterized protein LOC100259900 [Vitis vinifera]
          Length = 1409

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 30/58 (51%), Positives = 38/58 (65%), Gaps = 8/58 (13%)
 Frame = +2

Query: 50  LLCDSLDHVIDNCPGV-------TAQVNAFNSY-QKPGNNPFSNTYNPGWRNHPNLSW 199
           L+C S +H + +CP +       T Q NA  +Y Q   N+P+SNTYNPGWRNHPNLSW
Sbjct: 265 LICKSTEHGVQSCPTLPAVQDMFTEQANALGTYKQYSSNSPYSNTYNPGWRNHPNLSW 322


>emb|CAN78232.1| hypothetical protein VITISV_027465 [Vitis vinifera]
          Length = 1629

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 30/58 (51%), Positives = 38/58 (65%), Gaps = 8/58 (13%)
 Frame = +2

Query: 50  LLCDSLDHVIDNCPGV-------TAQVNAFNSY-QKPGNNPFSNTYNPGWRNHPNLSW 199
           L+C S +H + +CP +       T Q NA  +Y Q   N+P+SNTYNPGWRNHPNLSW
Sbjct: 104 LICKSTEHGVQSCPTLPAVQDMFTEQANALGTYKQYSSNSPYSNTYNPGWRNHPNLSW 161


>gb|ABG37658.1| integrase [Populus trichocarpa]
          Length = 1139

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 25/56 (44%), Positives = 39/56 (69%), Gaps = 7/56 (12%)
 Frame = +2

Query: 53  LCDSLDHVIDNCPGVTA-------QVNAFNSYQKPGNNPFSNTYNPGWRNHPNLSW 199
           +C++ +H  ++CP + +       Q +A N++Q+P +NP+S TYNPGWRNHPN SW
Sbjct: 94  ICETNEHSTNDCPTLPSFKECLHEQAHALNNFQRPNHNPYSQTYNPGWRNHPNFSW 149


>emb|CAN81739.1| hypothetical protein VITISV_009673 [Vitis vinifera]
          Length = 2377

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 29/58 (50%), Positives = 37/58 (63%), Gaps = 8/58 (13%)
 Frame = +2

Query: 50  LLCDSLDHVIDNCPGV-------TAQVNAFNSY-QKPGNNPFSNTYNPGWRNHPNLSW 199
           L+C S +H + +CP +       T Q N   +Y Q   N+P+SNTYNPGWRNHPNLSW
Sbjct: 291 LICKSTEHGVQSCPTLPAVQDMFTEQANXLGTYKQYSSNSPYSNTYNPGWRNHPNLSW 348