BLASTX nr result

ID: Coptis24_contig00024365 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024365
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277625.2| PREDICTED: probable ATP-dependent RNA helica...   108   3e-22
emb|CBI15516.3| unnamed protein product [Vitis vinifera]              108   3e-22
dbj|BAD52491.1| putative DEAD/H box polypeptide 36 protein [Oryz...   106   2e-21
gb|EEE53770.1| hypothetical protein OsJ_00159 [Oryza sativa Japo...   106   2e-21
gb|EEC69828.1| hypothetical protein OsI_00149 [Oryza sativa Indi...   106   2e-21

>ref|XP_002277625.2| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Vitis
           vinifera]
          Length = 1178

 Score =  108 bits (271), Expect = 3e-22
 Identities = 59/90 (65%), Positives = 65/90 (72%), Gaps = 3/90 (3%)
 Frame = +2

Query: 2   LATRMGLYSRQYSRVVVFSKVPLPNYRSDLDDKRPQREVTIQFGLQRQVDALLREHLSQK 181
           LATRMGLYS QYSRVVVFSKVPLPNYRSDLDDKRPQREV + FGLQR+V A L+E+LSQK
Sbjct: 149 LATRMGLYSCQYSRVVVFSKVPLPNYRSDLDDKRPQREVVLPFGLQREVHAHLKEYLSQK 208

Query: 182 PMKP---GXXXXXXXXXGRMDTDEGFFEQQ 262
            M                   T+EGF+EQQ
Sbjct: 209 SMSRESFSDKTLSRSIGNSSVTEEGFYEQQ 238


>emb|CBI15516.3| unnamed protein product [Vitis vinifera]
          Length = 1057

 Score =  108 bits (271), Expect = 3e-22
 Identities = 59/90 (65%), Positives = 65/90 (72%), Gaps = 3/90 (3%)
 Frame = +2

Query: 2   LATRMGLYSRQYSRVVVFSKVPLPNYRSDLDDKRPQREVTIQFGLQRQVDALLREHLSQK 181
           LATRMGLYS QYSRVVVFSKVPLPNYRSDLDDKRPQREV + FGLQR+V A L+E+LSQK
Sbjct: 28  LATRMGLYSCQYSRVVVFSKVPLPNYRSDLDDKRPQREVVLPFGLQREVHAHLKEYLSQK 87

Query: 182 PMKP---GXXXXXXXXXGRMDTDEGFFEQQ 262
            M                   T+EGF+EQQ
Sbjct: 88  SMSRESFSDKTLSRSIGNSSVTEEGFYEQQ 117


>dbj|BAD52491.1| putative DEAD/H box polypeptide 36 protein [Oryza sativa Japonica
           Group]
          Length = 1063

 Score =  106 bits (265), Expect = 2e-21
 Identities = 57/91 (62%), Positives = 64/91 (70%), Gaps = 4/91 (4%)
 Frame = +2

Query: 2   LATRMGLYSRQYSRVVVFSKVPLPNYRSDLDDKRPQREVTIQFGLQRQVDALLREHLSQK 181
           LA RMGLYSRQYSR+VVFSKVPLPNYRSDLDDKRPQREV+I  GLQR+VDALL ++L++K
Sbjct: 28  LAERMGLYSRQYSRIVVFSKVPLPNYRSDLDDKRPQREVSIPSGLQREVDALLSDYLARK 87

Query: 182 PMK----PGXXXXXXXXXGRMDTDEGFFEQQ 262
                  P              TDE F EQQ
Sbjct: 88  RTSSGSFPNAAFSRSSSTDSFATDESFLEQQ 118


>gb|EEE53770.1| hypothetical protein OsJ_00159 [Oryza sativa Japonica Group]
          Length = 1700

 Score =  106 bits (265), Expect = 2e-21
 Identities = 57/91 (62%), Positives = 64/91 (70%), Gaps = 4/91 (4%)
 Frame = +2

Query: 2   LATRMGLYSRQYSRVVVFSKVPLPNYRSDLDDKRPQREVTIQFGLQRQVDALLREHLSQK 181
           LA RMGLYSRQYSR+VVFSKVPLPNYRSDLDDKRPQREV+I  GLQR+VDALL ++L++K
Sbjct: 665 LAERMGLYSRQYSRIVVFSKVPLPNYRSDLDDKRPQREVSIPSGLQREVDALLSDYLARK 724

Query: 182 PMK----PGXXXXXXXXXGRMDTDEGFFEQQ 262
                  P              TDE F EQQ
Sbjct: 725 RTSSGSFPNAAFSRSSSTDSFATDESFLEQQ 755


>gb|EEC69828.1| hypothetical protein OsI_00149 [Oryza sativa Indica Group]
          Length = 1680

 Score =  106 bits (265), Expect = 2e-21
 Identities = 57/91 (62%), Positives = 64/91 (70%), Gaps = 4/91 (4%)
 Frame = +2

Query: 2   LATRMGLYSRQYSRVVVFSKVPLPNYRSDLDDKRPQREVTIQFGLQRQVDALLREHLSQK 181
           LA RMGLYSRQYSR+VVFSKVPLPNYRSDLDDKRPQREV+I  GLQR+VDALL ++L++K
Sbjct: 645 LAERMGLYSRQYSRIVVFSKVPLPNYRSDLDDKRPQREVSIPSGLQREVDALLSDYLARK 704

Query: 182 PMK----PGXXXXXXXXXGRMDTDEGFFEQQ 262
                  P              TDE F EQQ
Sbjct: 705 RTSSGSFPNAAFSRSSSTDSFATDESFLEQQ 735


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