BLASTX nr result

ID: Coptis24_contig00024364 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024364
         (417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW64739.1| hypothetical protein ZEAMMB73_823834 [Zea mays]         72   6e-11
ref|XP_002323246.1| predicted protein [Populus trichocarpa] gi|2...    71   8e-11
ref|XP_003632742.1| PREDICTED: uncharacterized protein LOC100854...    70   2e-10
emb|CBX25433.1| hypothetical_protein [Oryza glaberrima]                70   2e-10
gb|ABG22350.1| expressed protein [Oryza sativa Japonica Group] g...    70   2e-10

>gb|AFW64739.1| hypothetical protein ZEAMMB73_823834 [Zea mays]
          Length = 62

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 30/37 (81%), Positives = 32/37 (86%)
 Frame = -3

Query: 292 PHRTRPMASLLLFMGVNLVLFTTITPVYDFVCFLPYW 182
           PHR RPM  LL+FMGVNL LF TITPVYDFVCFLP+W
Sbjct: 2   PHRARPMTGLLVFMGVNLALFNTITPVYDFVCFLPHW 38


>ref|XP_002323246.1| predicted protein [Populus trichocarpa] gi|222867876|gb|EEF05007.1|
           predicted protein [Populus trichocarpa]
          Length = 58

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 29/37 (78%), Positives = 34/37 (91%)
 Frame = -3

Query: 292 PHRTRPMASLLLFMGVNLVLFTTITPVYDFVCFLPYW 182
           PHRTRPM +LL+F G+N+VL +TITPVYDFVCFLPYW
Sbjct: 2   PHRTRPMTALLVFSGINVVLVSTITPVYDFVCFLPYW 38


>ref|XP_003632742.1| PREDICTED: uncharacterized protein LOC100854042 [Vitis vinifera]
          Length = 59

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 29/37 (78%), Positives = 34/37 (91%)
 Frame = -3

Query: 292 PHRTRPMASLLLFMGVNLVLFTTITPVYDFVCFLPYW 182
           PHRTRPM +LL+F G+N+VL +TITPVYDFVCFLPYW
Sbjct: 2   PHRTRPMTALLVFTGLNVVLASTITPVYDFVCFLPYW 38


>emb|CBX25433.1| hypothetical_protein [Oryza glaberrima]
          Length = 62

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 33/55 (60%), Positives = 34/55 (61%)
 Frame = -3

Query: 292 PHRTRPMASLLLFMGVNLVLFTTITPVYDFVCFLPYWXXXXXXXXXXXEAASRNG 128
           PHR RPM  LLLF GVNLVL  TITPVYDFVCF PYW           +A   NG
Sbjct: 2   PHRARPMTGLLLFTGVNLVLLNTITPVYDFVCFHPYWERRRERRQKERKALQANG 56


>gb|ABG22350.1| expressed protein [Oryza sativa Japonica Group]
           gi|125576131|gb|EAZ17353.1| hypothetical protein
           OsJ_32876 [Oryza sativa Japonica Group]
          Length = 62

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 34/55 (61%), Positives = 34/55 (61%)
 Frame = -3

Query: 292 PHRTRPMASLLLFMGVNLVLFTTITPVYDFVCFLPYWXXXXXXXXXXXEAASRNG 128
           PHR RPM  LLLF GVNLVL  TITPVYDFVCF PYW           EA   NG
Sbjct: 2   PHRARPMTGLLLFTGVNLVLLNTITPVYDFVCFHPYWERRRERRQKEREALQANG 56


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