BLASTX nr result

ID: Coptis24_contig00024359 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024359
         (862 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324573.1| predicted protein [Populus trichocarpa] gi|2...   286   3e-75
emb|CBI25595.3| unnamed protein product [Vitis vinifera]              283   5e-74
ref|XP_002265610.1| PREDICTED: uncharacterized protein LOC100263...   283   5e-74
ref|XP_002532497.1| conserved hypothetical protein [Ricinus comm...   273   4e-71
ref|XP_002309313.1| predicted protein [Populus trichocarpa] gi|2...   255   8e-66

>ref|XP_002324573.1| predicted protein [Populus trichocarpa] gi|222866007|gb|EEF03138.1|
           predicted protein [Populus trichocarpa]
          Length = 547

 Score =  286 bits (733), Expect = 3e-75
 Identities = 147/226 (65%), Positives = 175/226 (77%), Gaps = 4/226 (1%)
 Frame = +2

Query: 11  KKNDSEDEAAPLPLG-ERSDDQVSTTTCHLVSSPIGEGPDTKLIKKKIHSDGSASDFFID 187
           KKNDS+ E APLPL  ERSD +  + +C+LV+SPIGEGPDTK IKKK+HS+GS+SDFFID
Sbjct: 323 KKNDSDGETAPLPLNNERSDSEAYSGSCNLVNSPIGEGPDTKQIKKKLHSNGSSSDFFID 382

Query: 188 KVLGENIKKELSRIQTELCTKNPNLQFSNDQIEAISTRLPVDKADLKKFFPKSWCDRYGD 367
           KVLG+ IKKELS+IQTELCT NP+L+FS+DQIEAIST+LPVDKADLKKFFPKSWCDRYGD
Sbjct: 383 KVLGDKIKKELSKIQTELCTTNPSLKFSDDQIEAISTKLPVDKADLKKFFPKSWCDRYGD 442

Query: 368 VVLDVVKKEFKDHVGEMENLRQGTRDK-QEDSTRWVSFDDNSENYHPNLFASQDQS-SAF 541
           VVLDVVKKEFKDHVGEMEN+R   R+K   +S RW +F+D  EN HPNLF+ QD S    
Sbjct: 443 VVLDVVKKEFKDHVGEMENMRNAAREKHHNNSMRWTTFEDEDENCHPNLFSQQDHSFPKK 502

Query: 542 TTNYTTNGSSTKWFAPSSF-LSGSDGDNLRSESAFSHDYNPFWSPK 676
             N+T     + +  P S   S S+G+ LR+ES      NPFW P+
Sbjct: 503 QQNFTAKNDQSAYTNPFSHDYSESNGNKLRTESF----QNPFWIPR 544


>emb|CBI25595.3| unnamed protein product [Vitis vinifera]
          Length = 527

 Score =  283 bits (723), Expect = 5e-74
 Identities = 154/239 (64%), Positives = 174/239 (72%), Gaps = 17/239 (7%)
 Frame = +2

Query: 11  KKNDSEDEAAPLPLGERSDDQVSTTTCHLVSSPIGEGPDTKLIKKKIHSDGSASDFFIDK 190
           K+N+ EDE  PLPL ERSD +     C LV+SPIGEGPDTK IK+KIHS+GS+SDFFIDK
Sbjct: 283 KRNNWEDETTPLPLSERSDIESYLGPCQLVASPIGEGPDTKQIKRKIHSNGSSSDFFIDK 342

Query: 191 VLGENIKKELSRIQTELCTKNPNLQFSNDQIEAISTRLPVDKADLKKFFPKSWCDRYGDV 370
           VLGE IKKELS IQTEL T N NLQFSNDQIEAIST+LPVDKADLKKFFPKSWCDRYGDV
Sbjct: 343 VLGEKIKKELSLIQTELNTTNHNLQFSNDQIEAISTKLPVDKADLKKFFPKSWCDRYGDV 402

Query: 371 VLDVVKKEFKDHVGEMENLRQGTRDKQEDSTRWVSFDDNSENYHPNLFASQDQS------ 532
           VLDVVKKEFKDHVGEME++R   R+K+  STRW +F+D+ EN HPNLFA QD S      
Sbjct: 403 VLDVVKKEFKDHVGEMESMRNAAREKRGHSTRWTTFEDD-ENCHPNLFAHQDHSFQMKQT 461

Query: 533 ----SAFTTNYTTN--GSSTKWFAPSSFL---SGSDGDNLRSESAFSHD--YNPFWSPK 676
               S    +Y +N   S+TK F  + F    S   G+  RSE  F  D   NPFWSPK
Sbjct: 462 KLAPSKEDYSYISNIDSSNTKCFENNPFFHDYSDGRGEKPRSELGFYQDQNQNPFWSPK 520


>ref|XP_002265610.1| PREDICTED: uncharacterized protein LOC100263642 [Vitis vinifera]
          Length = 554

 Score =  283 bits (723), Expect = 5e-74
 Identities = 154/239 (64%), Positives = 174/239 (72%), Gaps = 17/239 (7%)
 Frame = +2

Query: 11   KKNDSEDEAAPLPLGERSDDQVSTTTCHLVSSPIGEGPDTKLIKKKIHSDGSASDFFIDK 190
            K+N+ EDE  PLPL ERSD +     C LV+SPIGEGPDTK IK+KIHS+GS+SDFFIDK
Sbjct: 310  KRNNWEDETTPLPLSERSDIESYLGPCQLVASPIGEGPDTKQIKRKIHSNGSSSDFFIDK 369

Query: 191  VLGENIKKELSRIQTELCTKNPNLQFSNDQIEAISTRLPVDKADLKKFFPKSWCDRYGDV 370
            VLGE IKKELS IQTEL T N NLQFSNDQIEAIST+LPVDKADLKKFFPKSWCDRYGDV
Sbjct: 370  VLGEKIKKELSLIQTELNTTNHNLQFSNDQIEAISTKLPVDKADLKKFFPKSWCDRYGDV 429

Query: 371  VLDVVKKEFKDHVGEMENLRQGTRDKQEDSTRWVSFDDNSENYHPNLFASQDQS------ 532
            VLDVVKKEFKDHVGEME++R   R+K+  STRW +F+D+ EN HPNLFA QD S      
Sbjct: 430  VLDVVKKEFKDHVGEMESMRNAAREKRGHSTRWTTFEDD-ENCHPNLFAHQDHSFQMKQT 488

Query: 533  ----SAFTTNYTTN--GSSTKWFAPSSFL---SGSDGDNLRSESAFSHD--YNPFWSPK 676
                S    +Y +N   S+TK F  + F    S   G+  RSE  F  D   NPFWSPK
Sbjct: 489  KLAPSKEDYSYISNIDSSNTKCFENNPFFHDYSDGRGEKPRSELGFYQDQNQNPFWSPK 547


>ref|XP_002532497.1| conserved hypothetical protein [Ricinus communis]
            gi|223527772|gb|EEF29873.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 552

 Score =  273 bits (698), Expect = 4e-71
 Identities = 145/234 (61%), Positives = 173/234 (73%), Gaps = 6/234 (2%)
 Frame = +2

Query: 11   KKNDSEDEAAPLPLG-ERSDDQVSTTTCHLVSSPIGEGPDTKLIKKKIHSDGSASDFFID 187
            KKNDS+DE APLPL  ERSD         LV SPIGEGPDTKLIK+K+HS+GS SDFFID
Sbjct: 324  KKNDSDDETAPLPLNNERSDSDSYLGPSRLVYSPIGEGPDTKLIKRKLHSNGSPSDFFID 383

Query: 188  KVLGENIKKELSRIQTELCTKNPNLQFSNDQIEAISTRLPVDKADLKKFFPKSWCDRYGD 367
            KVLG+ IKKELSRIQTELCT +P+L+FS+DQ+EAIST+LPVDKADLK+FFP SWCDRYGD
Sbjct: 384  KVLGDKIKKELSRIQTELCTTSPSLKFSDDQMEAISTKLPVDKADLKQFFPNSWCDRYGD 443

Query: 368  VVLDVVKKEFKDHVGEMENLRQGTRDK-QEDSTRWVSF-DDNSENYHPNLFASQDQSSAF 541
            VVLDVVKKEFKDHVGEMEN R   R+K   +S RW +F +D++EN HPNLFA  + ++ +
Sbjct: 444  VVLDVVKKEFKDHVGEMENKRNAAREKHNSNSMRWTTFEEDDNENCHPNLFACNNNNNGY 503

Query: 542  TTNYTTNGSSTKWFAPSSFLSGSDGDN---LRSESAFSHDYNPFWSPKADLSRL 694
            T      GSS K++  + F       N    RS+S+   D NPFWSP+   S L
Sbjct: 504  T------GSSNKYYENNPFFHDPSELNEIKHRSQSSPFQDQNPFWSPRQGSSFL 551


>ref|XP_002309313.1| predicted protein [Populus trichocarpa] gi|222855289|gb|EEE92836.1|
           predicted protein [Populus trichocarpa]
          Length = 538

 Score =  255 bits (652), Expect = 8e-66
 Identities = 137/226 (60%), Positives = 165/226 (73%), Gaps = 4/226 (1%)
 Frame = +2

Query: 11  KKNDSEDEAAPLPLG-ERSDDQVSTTTCHLVSSPIGEGPDTKLIKKKIHSDGSASDFFID 187
           KKNDS+DE APLPL  ERSD +  + + HLV SPIGEGPDT  IKKK+HS+GSASDFFID
Sbjct: 315 KKNDSDDETAPLPLNNERSDSEAYSGSYHLVDSPIGEGPDTIHIKKKLHSNGSASDFFID 374

Query: 188 KVLGENIKKELSRIQTELCTKNPNLQFSNDQIEAISTRLPVDKADLKKFFPKSWCDRYGD 367
           KV G+ IKKE+S+IQTEL T N +LQFS+DQIEA+ST+LPVDK DLKKF PKSW + YGD
Sbjct: 375 KVSGDKIKKEISKIQTELSTTNSSLQFSDDQIEAVSTKLPVDKVDLKKFCPKSWRE-YGD 433

Query: 368 VVLDVVKKEFKDHVGEMENLRQGTRDK-QEDSTRWVSFDDNSENYHPNLFASQDQ-SSAF 541
           VVLD VK+EFKDHVGEMEN R   R+K   +S RW +F+D+ ENYHPNLF+ QD  S   
Sbjct: 434 VVLDEVKEEFKDHVGEMENKRNAAREKHHNNSMRWTTFEDDDENYHPNLFSQQDHYSFPK 493

Query: 542 TTNYTTNGSSTKWFAPSSF-LSGSDGDNLRSESAFSHDYNPFWSPK 676
             N+T       +  P S   S ++GD +R+ES      NPFW P+
Sbjct: 494 GQNFTARNDHRAYTNPFSHDYSENNGDKMRTESF----QNPFWIPR 535


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