BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024350
         (272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303396.1| predicted protein [Populus trichocarpa] gi|2...   124   6e-27
ref|XP_002520397.1| conserved hypothetical protein [Ricinus comm...   112   4e-23
ref|XP_002975258.1| hypothetical protein SELMODRAFT_451567 [Sela...   101   7e-20
ref|XP_002987435.1| hypothetical protein SELMODRAFT_451566 [Sela...   101   7e-20
ref|XP_003480382.1| PREDICTED: ATP-dependent DNA helicase PIF1-l...    98   8e-19

>ref|XP_002303396.1| predicted protein [Populus trichocarpa] gi|222840828|gb|EEE78375.1|
           predicted protein [Populus trichocarpa]
          Length = 493

 Score =  124 bits (312), Expect = 6e-27
 Identities = 61/92 (66%), Positives = 73/92 (79%), Gaps = 2/92 (2%)
 Frame = -2

Query: 271 DLFDKLEYIARSLRGRVDKPWGGIQLIVSGDFFQLPPIVEDPL--GREFAFEANCWNASF 98
           DLF+ LEYIAR +RG  +  WGGIQLIV GDFFQLPP+++     G+EFAFEA+CWNASF
Sbjct: 167 DLFESLEYIARDIRGS-EVVWGGIQLIVCGDFFQLPPVIKQQKLSGKEFAFEADCWNASF 225

Query: 97  DLQVELTQVFRQSEREFIDLLQGVRRGRKDEE 2
           DLQVELTQVFRQS+   I +LQG+R+G  D E
Sbjct: 226 DLQVELTQVFRQSDPRLIKMLQGIRKGETDAE 257


>ref|XP_002520397.1| conserved hypothetical protein [Ricinus communis]
           gi|223540444|gb|EEF42013.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 512

 Score =  112 bits (279), Expect = 4e-23
 Identities = 55/90 (61%), Positives = 72/90 (80%), Gaps = 2/90 (2%)
 Frame = -2

Query: 265 FDKLEYIARSLRGRVDKPWGGIQLIVSGDFFQLPPIVE--DPLGREFAFEANCWNASFDL 92
           FD LE+IAR +RG  +  WGGIQLIVSGDFFQLP +++  +P G+EFAFEA+CWN SF  
Sbjct: 154 FDTLEFIARQIRGS-NNVWGGIQLIVSGDFFQLPLVLKKSNPSGKEFAFEADCWNRSFHA 212

Query: 91  QVELTQVFRQSEREFIDLLQGVRRGRKDEE 2
           QVE+T+VFRQ++ + I+LLQG+R+G  D E
Sbjct: 213 QVEITKVFRQTDPQLINLLQGIRKGVIDTE 242


>ref|XP_002975258.1| hypothetical protein SELMODRAFT_451567 [Selaginella moellendorffii]
           gi|300156832|gb|EFJ23459.1| hypothetical protein
           SELMODRAFT_451567 [Selaginella moellendorffii]
          Length = 580

 Score =  101 bits (251), Expect = 7e-20
 Identities = 46/85 (54%), Positives = 65/85 (76%)
 Frame = -2

Query: 271 DLFDKLEYIARSLRGRVDKPWGGIQLIVSGDFFQLPPIVEDPLGREFAFEANCWNASFDL 92
           +LFDK++++ R++R R  + +GG+QLIV+GDFFQLPP+ +    + F F A CW   FDL
Sbjct: 268 ELFDKVDFVGRAVR-RSKERFGGLQLIVTGDFFQLPPVQKPGETKSFVFSAKCWKECFDL 326

Query: 91  QVELTQVFRQSEREFIDLLQGVRRG 17
           Q+ELTQVFRQS+REF+ +L  +RRG
Sbjct: 327 QMELTQVFRQSDREFVGMLNEIRRG 351


>ref|XP_002987435.1| hypothetical protein SELMODRAFT_451566 [Selaginella moellendorffii]
           gi|300144841|gb|EFJ11522.1| hypothetical protein
           SELMODRAFT_451566 [Selaginella moellendorffii]
          Length = 580

 Score =  101 bits (251), Expect = 7e-20
 Identities = 46/85 (54%), Positives = 65/85 (76%)
 Frame = -2

Query: 271 DLFDKLEYIARSLRGRVDKPWGGIQLIVSGDFFQLPPIVEDPLGREFAFEANCWNASFDL 92
           +LFDK++++ R++R R  + +GG+QLIV+GDFFQLPP+ +    + F F A CW   FDL
Sbjct: 268 ELFDKVDFVGRAVR-RSKERFGGLQLIVTGDFFQLPPVQKPGETKSFVFNAKCWKECFDL 326

Query: 91  QVELTQVFRQSEREFIDLLQGVRRG 17
           Q+ELTQVFRQS+REF+ +L  +RRG
Sbjct: 327 QMELTQVFRQSDREFVGMLNEIRRG 351


>ref|XP_003480382.1| PREDICTED: ATP-dependent DNA helicase PIF1-like [Sus scrofa]
          Length = 494

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 47/90 (52%), Positives = 65/90 (72%)
 Frame = -2

Query: 271 DLFDKLEYIARSLRGRVDKPWGGIQLIVSGDFFQLPPIVEDPLGREFAFEANCWNASFDL 92
           DLFDKLE +AR++R + DKP+GGIQLI+ GDF QLPP+ + P   +F F+A  W     +
Sbjct: 314 DLFDKLEAVARAVRQQ-DKPFGGIQLIICGDFLQLPPVTKGPQPPQFCFQAKSWRRCVPV 372

Query: 91  QVELTQVFRQSEREFIDLLQGVRRGRKDEE 2
            +ELT+V+RQ+++ FI LLQ VR GR  +E
Sbjct: 373 TLELTEVWRQADKTFISLLQAVRLGRCSDE 402