BLASTX nr result

ID: Coptis24_contig00024347 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024347
         (409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329981.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
ref|XP_002337264.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
ref|XP_003591281.1| hypothetical protein MTR_1g085240 [Medicago ...    57   2e-06
ref|XP_002884544.1| hypothetical protein ARALYDRAFT_896695 [Arab...    55   5e-06

>ref|XP_002329981.1| predicted protein [Populus trichocarpa] gi|222871406|gb|EEF08537.1|
           predicted protein [Populus trichocarpa]
          Length = 134

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 32/71 (45%), Positives = 46/71 (64%), Gaps = 6/71 (8%)
 Frame = -1

Query: 385 IEKRRVFLSSYQFCRKTSLADRIKTSFIGVTKRFIIWFRLRSPRKV------SVKVRYRC 224
           +EKR++FL SYQFCRK +L +RIK S I   K  ++W RLRS RK+       ++  + C
Sbjct: 54  MEKRQLFLRSYQFCRKRTLTERIKGSLIRAKK--VMWLRLRSARKIRRLVWSRLRYAFYC 111

Query: 223 FGRRKFHRLVS 191
             RR+F RL++
Sbjct: 112 RRRRRFLRLIN 122


>ref|XP_002337264.1| predicted protein [Populus trichocarpa] gi|222838651|gb|EEE77016.1|
           predicted protein [Populus trichocarpa]
          Length = 81

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 32/71 (45%), Positives = 46/71 (64%), Gaps = 6/71 (8%)
 Frame = -1

Query: 385 IEKRRVFLSSYQFCRKTSLADRIKTSFIGVTKRFIIWFRLRSPRKV------SVKVRYRC 224
           +EKR++FL SYQFCRK +L +RIK S I   K  ++W RLRS RK+       ++  + C
Sbjct: 1   MEKRQLFLRSYQFCRKRTLTERIKGSLIRAKK--VMWLRLRSARKIRRLVWSRLRYAFYC 58

Query: 223 FGRRKFHRLVS 191
             RR+F RL++
Sbjct: 59  RRRRRFLRLIN 69


>ref|XP_003591281.1| hypothetical protein MTR_1g085240 [Medicago truncatula]
           gi|355480329|gb|AES61532.1| hypothetical protein
           MTR_1g085240 [Medicago truncatula]
          Length = 114

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 31/73 (42%), Positives = 48/73 (65%), Gaps = 7/73 (9%)
 Frame = -1

Query: 385 IEKRRVFLSSYQFCRKTSLADRIKTSFIGVTKRFIIWFRLRSPRKVSVKV----RYRC-- 224
           IEKR++FL SYQFCRK SL +RIK S +   K  ++W +LR  R +  K+    R++C  
Sbjct: 28  IEKRQLFLRSYQFCRKKSLTERIKGSLVRAKK--VVWLKLRYARGLRRKLVFFPRFKCGF 85

Query: 223 -FGRRKFHRLVSS 188
            + RR+F +L+++
Sbjct: 86  YYRRRRFSQLLNN 98


>ref|XP_002884544.1| hypothetical protein ARALYDRAFT_896695 [Arabidopsis lyrata subsp.
           lyrata] gi|297330384|gb|EFH60803.1| hypothetical protein
           ARALYDRAFT_896695 [Arabidopsis lyrata subsp. lyrata]
          Length = 101

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 31/70 (44%), Positives = 45/70 (64%), Gaps = 5/70 (7%)
 Frame = -1

Query: 388 YIEKRRVFLSSYQFCRKTSLADRIKTSFIGVTKRFIIWFRLRSPRKVSVKVRYR-----C 224
           Y+EKR++FL SYQF RK SL ++IK S   V K+ ++W RL+S R++   V  R      
Sbjct: 22  YVEKRQLFLKSYQFSRKQSLTEKIKISVKRVAKK-VVWMRLKSARRLKRVVWSRFKTAFF 80

Query: 223 FGRRKFHRLV 194
           + RR+F RL+
Sbjct: 81  YRRRRFFRLL 90


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