BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024345
         (216 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG52507.1|AC016662_1 unknown protein, 5' partial; 35-1255 [A...   113   1e-23
ref|NP_565080.1| Mitochondrial transcription termination factor ...   113   1e-23
ref|XP_002888966.1| hypothetical protein ARALYDRAFT_476555 [Arab...   113   1e-23
dbj|BAE99966.1| hypothetical protein [Arabidopsis thaliana]           113   1e-23
ref|XP_002265430.1| PREDICTED: uncharacterized protein LOC100256...   111   5e-23

>gb|AAG52507.1|AC016662_1 unknown protein, 5' partial; 35-1255 [Arabidopsis thaliana]
          Length = 404

 Score =  113 bits (283), Expect = 1e-23
 Identities = 52/70 (74%), Positives = 62/70 (88%)
 Frame = -3

Query: 214 FRAGFEVKRRVDCLCRHGMILREAFKVVQREPRVILYDVEDIEKKIEFLKHKMGFGVGCL 35
           FRAGFEVK RVDCLC++G+I R+AFKVV +EPRVILY++EDIEKKIEFL ++MGF + CL
Sbjct: 238 FRAGFEVKLRVDCLCKYGLIRRDAFKVVWKEPRVILYEIEDIEKKIEFLTNRMGFHINCL 297

Query: 34  NGVPEYLGVN 5
             VPEYLGVN
Sbjct: 298 ADVPEYLGVN 307


>ref|NP_565080.1| Mitochondrial transcription termination factor family protein
           [Arabidopsis thaliana]
           gi|12323819|gb|AAG51878.1|AC079678_8 unknown protein;
           33994-35331 [Arabidopsis thaliana]
           gi|332197431|gb|AEE35552.1| Mitochondrial transcription
           termination factor family protein [Arabidopsis thaliana]
          Length = 445

 Score =  113 bits (283), Expect = 1e-23
 Identities = 52/70 (74%), Positives = 62/70 (88%)
 Frame = -3

Query: 214 FRAGFEVKRRVDCLCRHGMILREAFKVVQREPRVILYDVEDIEKKIEFLKHKMGFGVGCL 35
           FRAGFEVK RVDCLC++G+I R+AFKVV +EPRVILY++EDIEKKIEFL ++MGF + CL
Sbjct: 279 FRAGFEVKLRVDCLCKYGLIRRDAFKVVWKEPRVILYEIEDIEKKIEFLTNRMGFHINCL 338

Query: 34  NGVPEYLGVN 5
             VPEYLGVN
Sbjct: 339 ADVPEYLGVN 348


>ref|XP_002888966.1| hypothetical protein ARALYDRAFT_476555 [Arabidopsis lyrata subsp.
           lyrata] gi|297334807|gb|EFH65225.1| hypothetical protein
           ARALYDRAFT_476555 [Arabidopsis lyrata subsp. lyrata]
          Length = 449

 Score =  113 bits (283), Expect = 1e-23
 Identities = 52/70 (74%), Positives = 62/70 (88%)
 Frame = -3

Query: 214 FRAGFEVKRRVDCLCRHGMILREAFKVVQREPRVILYDVEDIEKKIEFLKHKMGFGVGCL 35
           FRAGFEVK RVDCLC++G+I R+AFKVV +EPRVILY++EDIEKKIEFL ++MGF + CL
Sbjct: 283 FRAGFEVKLRVDCLCKYGLIRRDAFKVVWKEPRVILYEIEDIEKKIEFLTNRMGFHINCL 342

Query: 34  NGVPEYLGVN 5
             VPEYLGVN
Sbjct: 343 ADVPEYLGVN 352


>dbj|BAE99966.1| hypothetical protein [Arabidopsis thaliana]
          Length = 248

 Score =  113 bits (283), Expect = 1e-23
 Identities = 52/70 (74%), Positives = 62/70 (88%)
 Frame = -3

Query: 214 FRAGFEVKRRVDCLCRHGMILREAFKVVQREPRVILYDVEDIEKKIEFLKHKMGFGVGCL 35
           FRAGFEVK RVDCLC++G+I R+AFKVV +EPRVILY++EDIEKKIEFL ++MGF + CL
Sbjct: 82  FRAGFEVKLRVDCLCKYGLIRRDAFKVVWKEPRVILYEIEDIEKKIEFLTNRMGFHINCL 141

Query: 34  NGVPEYLGVN 5
             VPEYLGVN
Sbjct: 142 ADVPEYLGVN 151


>ref|XP_002265430.1| PREDICTED: uncharacterized protein LOC100256963 [Vitis vinifera]
           gi|297734077|emb|CBI15324.3| unnamed protein product
           [Vitis vinifera]
          Length = 451

 Score =  111 bits (278), Expect = 5e-23
 Identities = 51/70 (72%), Positives = 62/70 (88%)
 Frame = -3

Query: 211 RAGFEVKRRVDCLCRHGMILREAFKVVQREPRVILYDVEDIEKKIEFLKHKMGFGVGCLN 32
           RAGFEVK RVDCLCR+G+I REAF+V+ +EPRVI+Y++EDIE+KIEFL H+M + VGCL 
Sbjct: 287 RAGFEVKLRVDCLCRYGLIRREAFEVLWKEPRVIIYEIEDIEEKIEFLVHRMRYNVGCLI 346

Query: 31  GVPEYLGVNF 2
            VPEYLGVNF
Sbjct: 347 EVPEYLGVNF 356