BLASTX nr result

ID: Coptis24_contig00024342 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024342
         (1288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004146188.1| PREDICTED: pectinesterase/pectinesterase inh...   538   e-150
ref|XP_003595386.1| Pectinesterase [Medicago truncatula] gi|3554...   532   e-149
sp|Q43062.1|PME_PRUPE RecName: Full=Pectinesterase/pectinesteras...   530   e-148
gb|AER38246.1| PME3 [Gossypium barbadense]                            530   e-148
ref|XP_002877272.1| pectinesterase family protein [Arabidopsis l...   526   e-147

>ref|XP_004146188.1| PREDICTED: pectinesterase/pectinesterase inhibitor PPE8B-like
            [Cucumis sativus]
          Length = 507

 Score =  538 bits (1385), Expect = e-150
 Identities = 254/368 (69%), Positives = 303/368 (82%), Gaps = 1/368 (0%)
 Frame = -3

Query: 1286 KKVIGGSLQKVTSRVANVLGMVGQVPSNKNSPRDFPAWMKPGDRRLLQAPTXXXXXXXXX 1107
            K ++ G + ++TS++ ++L MV  +P   N P +FP+W+K  D+ LLQ            
Sbjct: 142  KGLVSGGVNQLTSQLYDLLSMVKSIP---NQPSEFPSWLKSEDQNLLQI--NDLAADATV 196

Query: 1106 AMDGSGSFSSVMDAILAAPDYSTRRYVIYVKRGVYKENVDIKKKKWNLMMIGDGMDATII 927
            A DG+G F++VMDA+LAAPD S RRYVIY+K+GVY ENV+IKKKKWNLMMIGDG+DATII
Sbjct: 197  AADGTGDFTNVMDAVLAAPDNSIRRYVIYIKKGVYLENVEIKKKKWNLMMIGDGIDATII 256

Query: 926  SGNRNFVDGWTTFRSATFAVSAKGFIARDISIENTAGPEKHQAVAVRSDSDLSAFYRCGF 747
            SGNR+F+DGWTTFRSATFAVS +GFIARDI+ ENTAG EKHQAVA+RSDSDLS F+RC  
Sbjct: 257  SGNRSFIDGWTTFRSATFAVSGRGFIARDITFENTAGAEKHQAVALRSDSDLSVFFRCRI 316

Query: 746  RGYQDTLYAHSLRQFYRECRITGTIDYIFGNAAAVFQNCQILAKKGLPNQKNTITAQGRK 567
            RGYQDTLY H++RQFYREC+I+GT+D++FG+A  VFQNC ILAKKGLPNQKNTITAQGRK
Sbjct: 317  RGYQDTLYTHTMRQFYRECQISGTVDFLFGDATVVFQNCSILAKKGLPNQKNTITAQGRK 376

Query: 566  DPNQSTGFSIQFCNISADSDLLPFVNTTQTYLGRPWKQYSRTVFMQSYMSSVLMPAGWLE 387
            DPNQ TGFSIQFCNISADSDL P VNTT TYLGRPWK+YSRT+ MQSY+S  + P GWLE
Sbjct: 377  DPNQPTGFSIQFCNISADSDLKPSVNTTATYLGRPWKEYSRTIIMQSYISDAIRPEGWLE 436

Query: 386  WQGDFALSTLYYGEYMNYGPGTGLGSRVKWPGYHQIDSTQAAT-FTVTQFIDGNLWLPPT 210
            W  +FAL+TL+Y E+MNYGPG GL  RV WPGYH+++ T  AT FTV QFI+GNLWLP T
Sbjct: 437  WNANFALNTLFYAEFMNYGPGAGLAKRVNWPGYHRLNQTSEATNFTVAQFIEGNLWLPST 496

Query: 209  GVKFTAGL 186
            GVK+TAGL
Sbjct: 497  GVKYTAGL 504


>ref|XP_003595386.1| Pectinesterase [Medicago truncatula] gi|355484434|gb|AES65637.1|
            Pectinesterase [Medicago truncatula]
          Length = 527

 Score =  532 bits (1371), Expect = e-149
 Identities = 257/372 (69%), Positives = 303/372 (81%), Gaps = 4/372 (1%)
 Frame = -3

Query: 1283 KVIGGSLQKVTSRVANVLGMVG---QVPSNKNSPRDFPAWMKPGDRRLLQAPTXXXXXXX 1113
            +++   L ++ S +A +L  V       + K     FP+W+K  DR+LLQA         
Sbjct: 158  QLVSTGLSQMMSMLAELLTQVDPNLDSFTQKEQKGRFPSWVKRDDRKLLQA--NGVNVDV 215

Query: 1112 XXAMDGSGSFSSVMDAILAAPDYSTRRYVIYVKRGVYKENVDIKKKKWNLMMIGDGMDAT 933
              A DGSG+F+ VMDA+ AAPDYS +RYVIYVKRGVY ENV+IKKKKWNLMM+GDGM+AT
Sbjct: 216  VVATDGSGNFTKVMDAVHAAPDYSMKRYVIYVKRGVYIENVEIKKKKWNLMMVGDGMNAT 275

Query: 932  IISGNRNFVDGWTTFRSATFAVSAKGFIARDISIENTAGPEKHQAVAVRSDSDLSAFYRC 753
            II+GNR+F+DGWTTFRSATFAVS +GFIARDIS +NTAGPEKHQAVA+RSDSDLS FYRC
Sbjct: 276  IITGNRSFIDGWTTFRSATFAVSGRGFIARDISFQNTAGPEKHQAVALRSDSDLSVFYRC 335

Query: 752  GFRGYQDTLYAHSLRQFYRECRITGTIDYIFGNAAAVFQNCQILAKKGLPNQKNTITAQG 573
            G  GYQD+LY H++RQF+REC+I+GT+D+IFG+A  +FQNCQIL KKGLPNQKNTITA G
Sbjct: 336  GIFGYQDSLYTHTMRQFFRECKISGTVDFIFGDATTLFQNCQILVKKGLPNQKNTITAHG 395

Query: 572  RKDPNQSTGFSIQFCNISADSDLLPFVNTTQTYLGRPWKQYSRTVFMQSYMSSVLMPAGW 393
            RKDPN+ TGFSIQFCNI+AD+DLLP VN+T TYLGRPWK+YSRT+FMQS++S VL P GW
Sbjct: 396  RKDPNEPTGFSIQFCNITADTDLLPSVNSTYTYLGRPWKEYSRTIFMQSHISDVLRPEGW 455

Query: 392  LEWQGDFALSTLYYGEYMNYGPGTGLGSRVKWPGYHQI-DSTQAATFTVTQFIDGNLWLP 216
            LEW GDFAL TLYY EYMNYG G GL  RVKWPGYH + DS+QA+ FTVTQFI+GNLWLP
Sbjct: 456  LEWNGDFALDTLYYAEYMNYGSGAGLNKRVKWPGYHIMNDSSQASNFTVTQFIEGNLWLP 515

Query: 215  PTGVKFTAGLTV 180
             TGV FTAGL V
Sbjct: 516  TTGVAFTAGLGV 527


>sp|Q43062.1|PME_PRUPE RecName: Full=Pectinesterase/pectinesterase inhibitor PPE8B;
            Includes: RecName: Full=Pectinesterase inhibitor PPE8B;
            AltName: Full=Pectin methylesterase inhibitor PPE8B;
            Includes: RecName: Full=Pectinesterase PPE8B; Short=PE
            PPE8B; AltName: Full=Pectin methylesterase PPE8B; Flags:
            Precursor gi|1213629|emb|CAA65237.1| pectinesterase
            [Prunus persica]
          Length = 522

 Score =  530 bits (1366), Expect = e-148
 Identities = 257/365 (70%), Positives = 299/365 (81%), Gaps = 2/365 (0%)
 Frame = -3

Query: 1280 VIGGSLQKVTSRVANVLGMVGQVPSNKNSPRDFPAWMKPGDRRLLQAPTXXXXXXXXXAM 1101
            +I   L +VTS V  +L  V    + +      P+W+K  DR+LLQA           A 
Sbjct: 156  LISAGLGQVTSLVQELLTQVHPNSNQQGPNGQIPSWVKTKDRKLLQAD--GVSVDAIVAQ 213

Query: 1100 DGSGSFSSVMDAILAAPDYSTRRYVIYVKRGVYKENVDIKKKKWNLMMIGDGMDATIISG 921
            DG+G+F++V DA+LAAPDYS RRYVIY+KRG YKENV+IKKKKWNLMMIGDGMDATIISG
Sbjct: 214  DGTGNFTNVTDAVLAAPDYSMRRYVIYIKRGTYKENVEIKKKKWNLMMIGDGMDATIISG 273

Query: 920  NRNFVDGWTTFRSATFAVSAKGFIARDISIENTAGPEKHQAVAVRSDSDLSAFYRCGFRG 741
            NR+FVDGWTTFRSATFAVS +GFIARDI+ ENTAGPEKHQAVA+RSDSDLS FYRC  RG
Sbjct: 274  NRSFVDGWTTFRSATFAVSGRGFIARDITFENTAGPEKHQAVALRSDSDLSVFYRCNIRG 333

Query: 740  YQDTLYAHSLRQFYRECRITGTIDYIFGNAAAVFQNCQILAKKGLPNQKNTITAQGRKDP 561
            YQDTLY H++RQFYR+C+I+GT+D+IFG+A  VFQNCQILAKKGLPNQKN+ITAQGRKDP
Sbjct: 334  YQDTLYTHTMRQFYRDCKISGTVDFIFGDATVVFQNCQILAKKGLPNQKNSITAQGRKDP 393

Query: 560  NQSTGFSIQFCNISADSDL-LPFVNTTQTYLGRPWKQYSRTVFMQSYMSSVLMPAGWLEW 384
            N+ TG SIQFCNI+ADSDL    VN+T TYLGRPWK YSRTV MQS++S+V+ P GWLEW
Sbjct: 394  NEPTGISIQFCNITADSDLEAASVNSTPTYLGRPWKLYSRTVIMQSFLSNVIRPEGWLEW 453

Query: 383  QGDFALSTLYYGEYMNYGPGTGLGSRVKWPGYHQI-DSTQAATFTVTQFIDGNLWLPPTG 207
             GDFAL++L+YGEYMNYGPG GLGSRVKWPGY    +STQA  +TV QFI+GNLWLP TG
Sbjct: 454  NGDFALNSLFYGEYMNYGPGAGLGSRVKWPGYQVFNESTQAKNYTVAQFIEGNLWLPSTG 513

Query: 206  VKFTA 192
            VK+TA
Sbjct: 514  VKYTA 518


>gb|AER38246.1| PME3 [Gossypium barbadense]
          Length = 514

 Score =  530 bits (1364), Expect = e-148
 Identities = 251/376 (66%), Positives = 307/376 (81%), Gaps = 9/376 (2%)
 Frame = -3

Query: 1286 KKVIGGSLQKVTSRVANVLGMVGQVPSNKNSPRD--------FPAWMKPGDRRLLQAPTX 1131
            K V+ G L +VTS V+++L MV    S+  S  D        FP+W +  D++LLQA   
Sbjct: 139  KTVVAGGLNQVTSLVSDLLTMVQPPGSDSRSNGDRKVAEKNRFPSWFEREDQKLLQA--N 196

Query: 1130 XXXXXXXXAMDGSGSFSSVMDAILAAPDYSTRRYVIYVKRGVYKENVDIKKKKWNLMMIG 951
                    A+DG+G+F+++MDA+ AAPDYS  R+VIY+K+G+YKENV+IKKKKWNLMM+G
Sbjct: 197  GVTADAVVALDGTGTFTNIMDAVAAAPDYSMNRHVIYIKKGLYKENVEIKKKKWNLMMVG 256

Query: 950  DGMDATIISGNRNFVDGWTTFRSATFAVSAKGFIARDISIENTAGPEKHQAVAVRSDSDL 771
            DG++ TIISGNR+FVDGWTTFRSATFAVS +GFIARDI+ ENTAGP+KHQAVA+RSDSDL
Sbjct: 257  DGINGTIISGNRSFVDGWTTFRSATFAVSGRGFIARDITFENTAGPQKHQAVALRSDSDL 316

Query: 770  SAFYRCGFRGYQDTLYAHSLRQFYRECRITGTIDYIFGNAAAVFQNCQILAKKGLPNQKN 591
            S F+RC  +GYQD+LY H++RQF+RECRITGT+D+IFG+A+ VFQNCQILAK+GLPNQKN
Sbjct: 317  SVFFRCAIKGYQDSLYTHTMRQFFRECRITGTVDFIFGDASVVFQNCQILAKQGLPNQKN 376

Query: 590  TITAQGRKDPNQSTGFSIQFCNISADSDLLPFVNTTQTYLGRPWKQYSRTVFMQSYMSSV 411
            TITAQGRKDPNQ TGFSIQFCNISAD+DLLPFVN+T TYLGRPWK YSRT+ MQSY+ + 
Sbjct: 377  TITAQGRKDPNQPTGFSIQFCNISADADLLPFVNSTPTYLGRPWKLYSRTIIMQSYIGNA 436

Query: 410  LMPAGWLEWQGDFALSTLYYGEYMNYGPGTGLGSRVKWPGYHQI-DSTQAATFTVTQFID 234
            + P GWLEW  DFAL TLYY E+MN+GPG GLG RV+WPGYH + +S QA  FTV + I+
Sbjct: 437  VRPQGWLEWNQDFALDTLYYAEFMNFGPGAGLGGRVQWPGYHALNNSAQAGNFTVARLIE 496

Query: 233  GNLWLPPTGVKFTAGL 186
            G+LWLP TGVK+TAGL
Sbjct: 497  GDLWLPSTGVKYTAGL 512


>ref|XP_002877272.1| pectinesterase family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297323110|gb|EFH53531.1| pectinesterase family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 527

 Score =  526 bits (1355), Expect = e-147
 Identities = 251/383 (65%), Positives = 303/383 (79%), Gaps = 16/383 (4%)
 Frame = -3

Query: 1286 KKVIGGSLQKVTSRVANVLGMVGQVPSNKNSPRD---------------FPAWMKPGDRR 1152
            KK++ G L +V + V N+L MV   PS K  P+                FP+W+KPGDR+
Sbjct: 145  KKIVAGGLSRVGTTVRNLLTMVHSPPS-KAKPKPIKAHTMTKAHSGFSKFPSWVKPGDRK 203

Query: 1151 LLQAPTXXXXXXXXXAMDGSGSFSSVMDAILAAPDYSTRRYVIYVKRGVYKENVDIKKKK 972
            LLQ              DG+G+F+++ DA+LAAPDYST+RYVI+VKRGVY+ENV+IKKKK
Sbjct: 204  LLQTDNITVADAVVAT-DGTGNFTTISDAVLAAPDYSTKRYVIHVKRGVYEENVEIKKKK 262

Query: 971  WNLMMIGDGMDATIISGNRNFVDGWTTFRSATFAVSAKGFIARDISIENTAGPEKHQAVA 792
            WN+M++GDG+DAT+I+GNR+F+DGWTTFRSATFAVS +GFI RDI+ +NTAGPEKHQAVA
Sbjct: 263  WNIMIVGDGIDATVITGNRSFIDGWTTFRSATFAVSGRGFIGRDITFQNTAGPEKHQAVA 322

Query: 791  VRSDSDLSAFYRCGFRGYQDTLYAHSLRQFYRECRITGTIDYIFGNAAAVFQNCQILAKK 612
            +RSD+DL  FYRC  RGYQDTLYAHS+RQF+REC ITGT+D+IFG+A AVFQNCQI AK+
Sbjct: 323  IRSDTDLGVFYRCAMRGYQDTLYAHSMRQFFRECIITGTVDFIFGDATAVFQNCQIKAKQ 382

Query: 611  GLPNQKNTITAQGRKDPNQSTGFSIQFCNISADSDLLPFVNTTQTYLGRPWKQYSRTVFM 432
            GLPNQKN+ITAQGRKDPN+ TGF+IQF NI+AD+DLLP  NTT TYLGRPWK YSRTVFM
Sbjct: 383  GLPNQKNSITAQGRKDPNEPTGFTIQFSNIAADTDLLPNSNTTATYLGRPWKLYSRTVFM 442

Query: 431  QSYMSSVLMPAGWLEWQGDFALSTLYYGEYMNYGPGTGLGSRVKWPGYHQIDS-TQAATF 255
            Q+YMS  + P GWLEW G+FAL TLYYGEYMN GPG  L  RVKWPGYH +++  +A  F
Sbjct: 443  QNYMSDAINPEGWLEWNGNFALDTLYYGEYMNSGPGASLDRRVKWPGYHVLNTPAEANNF 502

Query: 254  TVTQFIDGNLWLPPTGVKFTAGL 186
            TV+QFI GNLWLP TG+ F AGL
Sbjct: 503  TVSQFIQGNLWLPSTGITFIAGL 525


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