BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024341
         (510 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263340.2| PREDICTED: flap endonuclease GEN-like 2-like...   256   1e-66
ref|XP_002322464.1| predicted protein [Populus trichocarpa] gi|2...   248   4e-64
ref|XP_003619487.1| Flap endonuclease GEN-like protein [Medicago...   246   1e-63
ref|XP_003548199.1| PREDICTED: flap endonuclease GEN-like 2-like...   237   6e-61
ref|XP_003571285.1| PREDICTED: flap endonuclease GEN-like 2-like...   223   1e-56

>ref|XP_002263340.2| PREDICTED: flap endonuclease GEN-like 2-like [Vitis vinifera]
           gi|297741051|emb|CBI31782.3| unnamed protein product
           [Vitis vinifera]
          Length = 565

 Score =  256 bits (654), Expect = 1e-66
 Identities = 126/151 (83%), Positives = 138/151 (91%), Gaps = 1/151 (0%)
 Frame = -2

Query: 452 MGVKNLWDILESCKKTLPLHHLQNKRVCIDLSCWIVQLQNVCKSHSSIKDKVYLRSLFHR 273
           MGVKNLWDILESCKKTLPL+HLQNKRVCIDLSCW+VQLQNV KSH+SIKDK+YL+ LFHR
Sbjct: 1   MGVKNLWDILESCKKTLPLYHLQNKRVCIDLSCWMVQLQNVNKSHASIKDKLYLKGLFHR 60

Query: 272 LRALLALNCTLVLVADGSIPAIKLSTYRRRLGSGSEATRDEKKSQKL-SLPRNMGSEFSC 96
           LRAL+ALNC+L+ V DGSIPAIKL+TYRRRL SG+E TRDE  S  + SL RNMGSEFSC
Sbjct: 61  LRALIALNCSLLFVTDGSIPAIKLATYRRRLNSGTEVTRDETNSHNVPSLRRNMGSEFSC 120

Query: 95  MIKEAKVLGMALGIPCLDSIEEAEAQCALLN 3
           MIKEAKVLG+ALGIPCLD IEEAEAQCALLN
Sbjct: 121 MIKEAKVLGLALGIPCLDGIEEAEAQCALLN 151


>ref|XP_002322464.1| predicted protein [Populus trichocarpa] gi|222869460|gb|EEF06591.1|
           predicted protein [Populus trichocarpa]
          Length = 541

 Score =  248 bits (633), Expect = 4e-64
 Identities = 124/152 (81%), Positives = 136/152 (89%), Gaps = 2/152 (1%)
 Frame = -2

Query: 452 MGVKNLWDILESCKKTLPLHHLQNKRVCIDLSCWIVQLQNVCKSHSS-IKDKVYLRSLFH 276
           MGVKNLWDILESCKKTLPLHHLQNKRVCIDLSCW+VQLQNV K+H   +KDK Y+R+LFH
Sbjct: 1   MGVKNLWDILESCKKTLPLHHLQNKRVCIDLSCWMVQLQNVNKTHCGLVKDKPYIRNLFH 60

Query: 275 RLRALLALNCTLVLVADGSIPAIKLSTYRRRLGSGSEATRDEKKSQK-LSLPRNMGSEFS 99
           RLRAL+ALNC+L+ VADGSIPAIKL+TYRRRL  G E T+DE  SQK  SL RNMGSEFS
Sbjct: 61  RLRALIALNCSLIFVADGSIPAIKLATYRRRLNLGLEVTQDETNSQKACSLRRNMGSEFS 120

Query: 98  CMIKEAKVLGMALGIPCLDSIEEAEAQCALLN 3
           CMIKEAK +G+ALGIPCLDSIEEAEAQCALLN
Sbjct: 121 CMIKEAKDIGLALGIPCLDSIEEAEAQCALLN 152


>ref|XP_003619487.1| Flap endonuclease GEN-like protein [Medicago truncatula]
           gi|355494502|gb|AES75705.1| Flap endonuclease GEN-like
           protein [Medicago truncatula]
          Length = 571

 Score =  246 bits (628), Expect = 1e-63
 Identities = 118/151 (78%), Positives = 134/151 (88%), Gaps = 1/151 (0%)
 Frame = -2

Query: 452 MGVKNLWDILESCKKTLPLHHLQNKRVCIDLSCWIVQLQNVCKSHSSIKDKVYLRSLFHR 273
           MGVKNLWDILESCKKT+PLHHLQNKRVC+DLSCW+VQLQNVCKSH+ +K+KV+LR LFHR
Sbjct: 1   MGVKNLWDILESCKKTVPLHHLQNKRVCVDLSCWMVQLQNVCKSHACLKEKVHLRGLFHR 60

Query: 272 LRALLALNCTLVLVADGSIPAIKLSTYRRRLGSGSEATRDEKKSQK-LSLPRNMGSEFSC 96
           LRAL+ALNCT+V V+DGSIPAIKLSTYRRRL +G E  + E   QK  SL RN+GSEFSC
Sbjct: 61  LRALIALNCTVVFVSDGSIPAIKLSTYRRRLNNGKEVAQKETNLQKTTSLRRNLGSEFSC 120

Query: 95  MIKEAKVLGMALGIPCLDSIEEAEAQCALLN 3
           MI EAK+LGMALG+ CL+ IEEAEAQCALLN
Sbjct: 121 MISEAKILGMALGVSCLNGIEEAEAQCALLN 151


>ref|XP_003548199.1| PREDICTED: flap endonuclease GEN-like 2-like [Glycine max]
          Length = 588

 Score =  237 bits (605), Expect = 6e-61
 Identities = 117/153 (76%), Positives = 133/153 (86%), Gaps = 3/153 (1%)
 Frame = -2

Query: 452 MGVKNLWDILESCKKTLPLHHLQNKRVCIDLSCWIVQLQNVCKSHSSIKDKVYLRSLFHR 273
           MGVKNLWD+LESCKKT+PLHHLQNKRVC+DLSCW+VQL +V KSH+ +K+KVYLR LFHR
Sbjct: 1   MGVKNLWDVLESCKKTVPLHHLQNKRVCVDLSCWMVQLHSVSKSHACVKEKVYLRGLFHR 60

Query: 272 LRALLALNCTLVLVADGSIPAIKLSTYRRRLGSGSE--ATRDEKKSQK-LSLPRNMGSEF 102
           LRAL+ALNC+L+ V+DG+IPAIKLSTYRRRL  G E    ++E   QK  SL RNMGSEF
Sbjct: 61  LRALIALNCSLIFVSDGAIPAIKLSTYRRRLNVGKEVQVAQNETNLQKATSLQRNMGSEF 120

Query: 101 SCMIKEAKVLGMALGIPCLDSIEEAEAQCALLN 3
           SCMIKEAKVLGMALGI CL+ IEEAEAQCALLN
Sbjct: 121 SCMIKEAKVLGMALGISCLNGIEEAEAQCALLN 153


>ref|XP_003571285.1| PREDICTED: flap endonuclease GEN-like 2-like [Brachypodium
           distachyon]
          Length = 706

 Score =  223 bits (569), Expect = 1e-56
 Identities = 108/151 (71%), Positives = 129/151 (85%), Gaps = 1/151 (0%)
 Frame = -2

Query: 452 MGVKNLWDILESCKKTLPLHHLQNKRVCIDLSCWIVQLQNVCKSHSSIKDKVYLRSLFHR 273
           MGVKNLWDIL+SCK+ LPL+HLQNK+VC+DLSCW+VQ  +  +S + +KDKVYL++LFHR
Sbjct: 1   MGVKNLWDILDSCKQKLPLNHLQNKKVCVDLSCWLVQFCSANRSPAFVKDKVYLKNLFHR 60

Query: 272 LRALLALNCTLVLVADGSIPAIKLSTYRRRLGSGSEATRDEKKSQKL-SLPRNMGSEFSC 96
           +RALLALNC+L+ V DG+IP++KL+TYRRRLGS SEAT DE   Q L SL RN GSEFS 
Sbjct: 61  IRALLALNCSLIFVTDGAIPSVKLATYRRRLGSNSEATHDETNPQPLTSLRRNKGSEFSR 120

Query: 95  MIKEAKVLGMALGIPCLDSIEEAEAQCALLN 3
           MIKEAK LG+ALGIPCLD +EE EAQCALLN
Sbjct: 121 MIKEAKNLGLALGIPCLDGVEEGEAQCALLN 151