BLASTX nr result
ID: Coptis24_contig00024340
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00024340 (249 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002269262.1| PREDICTED: uncharacterized protein LOC100255... 64 2e-08 emb|CAN63978.1| hypothetical protein VITISV_006526 [Vitis vinifera] 64 2e-08 ref|XP_002324697.1| predicted protein [Populus trichocarpa] gi|2... 54 1e-05 >ref|XP_002269262.1| PREDICTED: uncharacterized protein LOC100255532 [Vitis vinifera] gi|296090285|emb|CBI40104.3| unnamed protein product [Vitis vinifera] Length = 290 Score = 63.5 bits (153), Expect = 2e-08 Identities = 32/46 (69%), Positives = 37/46 (80%) Frame = -3 Query: 139 AGFPTSPNGDIKMMFPIMCPAFVPGLIPMQNQEQQTNLGTGLYAVP 2 +GFP SPNG+I+M FPIM PA VPGLI +QNQE Q N G G+YAVP Sbjct: 29 SGFPVSPNGNIQM-FPIMYPALVPGLISLQNQE-QVNRGAGIYAVP 72 >emb|CAN63978.1| hypothetical protein VITISV_006526 [Vitis vinifera] Length = 172 Score = 63.5 bits (153), Expect = 2e-08 Identities = 32/46 (69%), Positives = 37/46 (80%) Frame = -3 Query: 139 AGFPTSPNGDIKMMFPIMCPAFVPGLIPMQNQEQQTNLGTGLYAVP 2 +GFP SPNG+I+M FPIM PA VPGLI +QNQE Q N G G+YAVP Sbjct: 73 SGFPVSPNGNIQM-FPIMYPALVPGLISLQNQE-QVNRGAGIYAVP 116 >ref|XP_002324697.1| predicted protein [Populus trichocarpa] gi|222866131|gb|EEF03262.1| predicted protein [Populus trichocarpa] Length = 290 Score = 54.3 bits (129), Expect = 1e-05 Identities = 28/46 (60%), Positives = 33/46 (71%) Frame = -3 Query: 139 AGFPTSPNGDIKMMFPIMCPAFVPGLIPMQNQEQQTNLGTGLYAVP 2 +GFP P+G +M FP+M PA VPGL MQNQE Q N G G+YAVP Sbjct: 36 SGFPAYPDGGFQM-FPVMYPALVPGLNAMQNQE-QANHGPGIYAVP 79