BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024335
         (467 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635142.1| PREDICTED: uncharacterized protein LOC100244...   172   3e-41
emb|CBI18563.3| unnamed protein product [Vitis vinifera]              172   3e-41
ref|XP_002522340.1| zinc finger protein, putative [Ricinus commu...   161   6e-38
ref|XP_002310753.1| f-box family protein [Populus trichocarpa] g...   160   1e-37
emb|CAN72540.1| hypothetical protein VITISV_028751 [Vitis vinifera]   156   1e-36

>ref|XP_003635142.1| PREDICTED: uncharacterized protein LOC100244391 [Vitis vinifera]
          Length = 332

 Score =  172 bits (435), Expect = 3e-41
 Identities = 93/156 (59%), Positives = 101/156 (64%), Gaps = 1/156 (0%)
 Frame = -2

Query: 466 FCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKSKGTIXXXXXXXXXXXXXXX 287
           FCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRK+K T                
Sbjct: 76  FCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKNTSVSTAVGKSSAGKAKS 135

Query: 286 XXSDIVKSSLGSGFDQEQPSNPILWGSPQNPQSQLLAFLRATXXXXXXXXXXXXXXXXSK 107
             S+I KS LG GFD E PSNPILW SPQN  S LLA LRAT                 K
Sbjct: 136 AVSEIGKSGLGGGFDHEIPSNPILWASPQN--SHLLALLRAT-QNPNPNPSPISNSVTVK 192

Query: 106 DEGHMIGSHVSLESAAVTGALN-ARTIGLDSLGQVP 2
           D+G MIGSH++ ES   TGA+N AR +GLD L Q+P
Sbjct: 193 DDGVMIGSHMTSESGVGTGAVNIARNMGLDHLNQLP 228


>emb|CBI18563.3| unnamed protein product [Vitis vinifera]
          Length = 425

 Score =  172 bits (435), Expect = 3e-41
 Identities = 93/156 (59%), Positives = 101/156 (64%), Gaps = 1/156 (0%)
 Frame = -2

Query: 466 FCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKSKGTIXXXXXXXXXXXXXXX 287
           FCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRK+K T                
Sbjct: 149 FCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKNTSVSTAVGKSSAGKAKS 208

Query: 286 XXSDIVKSSLGSGFDQEQPSNPILWGSPQNPQSQLLAFLRATXXXXXXXXXXXXXXXXSK 107
             S+I KS LG GFD E PSNPILW SPQN  S LLA LRAT                 K
Sbjct: 209 AVSEIGKSGLGGGFDHEIPSNPILWASPQN--SHLLALLRAT-QNPNPNPSPISNSVTVK 265

Query: 106 DEGHMIGSHVSLESAAVTGALN-ARTIGLDSLGQVP 2
           D+G MIGSH++ ES   TGA+N AR +GLD L Q+P
Sbjct: 266 DDGVMIGSHMTSESGVGTGAVNIARNMGLDHLNQLP 301


>ref|XP_002522340.1| zinc finger protein, putative [Ricinus communis]
           gi|223538418|gb|EEF40024.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 335

 Score =  161 bits (407), Expect = 6e-38
 Identities = 83/156 (53%), Positives = 97/156 (62%), Gaps = 1/156 (0%)
 Frame = -2

Query: 466 FCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKSKGTIXXXXXXXXXXXXXXX 287
           FCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRK+K T+               
Sbjct: 81  FCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKNTVVSASVAKSSNNKMKT 140

Query: 286 XXSDIVKSSLGSGFDQEQP-SNPILWGSPQNPQSQLLAFLRATXXXXXXXXXXXXXXXXS 110
             S+I +SS G+ FD E P S+PI+W SP N  S LL  LRA                  
Sbjct: 141 MVSEIGRSSFGNVFDHELPSSSPIMWASPHN--SHLLTLLRANHNPNPNSTTLSNSLGVK 198

Query: 109 KDEGHMIGSHVSLESAAVTGALNARTIGLDSLGQVP 2
           ++ G MIG+ +  E+   TGALNART+G+D L QVP
Sbjct: 199 EETGCMIGTQMMAETTGATGALNARTLGMDHLSQVP 234


>ref|XP_002310753.1| f-box family protein [Populus trichocarpa]
           gi|118482074|gb|ABK92968.1| unknown [Populus
           trichocarpa] gi|222853656|gb|EEE91203.1| f-box family
           protein [Populus trichocarpa]
          Length = 323

 Score =  160 bits (405), Expect = 1e-37
 Identities = 84/155 (54%), Positives = 96/155 (61%)
 Frame = -2

Query: 466 FCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKSKGTIXXXXXXXXXXXXXXX 287
           FCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRK+K T                
Sbjct: 77  FCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKNTSVSASVGKSGTNKMKT 136

Query: 286 XXSDIVKSSLGSGFDQEQPSNPILWGSPQNPQSQLLAFLRATXXXXXXXXXXXXXXXXSK 107
             SDI +S  G+GF+ E  S+PI+W SPQN  S +LA LRAT                 K
Sbjct: 137 MASDIGRSGFGNGFEHELSSSPIMWASPQN--SHILALLRAT---QNPNPSTLSNSIFVK 191

Query: 106 DEGHMIGSHVSLESAAVTGALNARTIGLDSLGQVP 2
           +EG +IG+    E    T ALNART+GLD + QVP
Sbjct: 192 EEGGLIGNQFISEPGVGTAALNARTLGLDPISQVP 226


>emb|CAN72540.1| hypothetical protein VITISV_028751 [Vitis vinifera]
          Length = 309

 Score =  156 bits (395), Expect = 1e-36
 Identities = 86/148 (58%), Positives = 92/148 (62%)
 Frame = -2

Query: 466 FCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKSKGTIXXXXXXXXXXXXXXX 287
           FCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRK+K T                
Sbjct: 76  FCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKNTSVSTAVGKSSAGKAKS 135

Query: 286 XXSDIVKSSLGSGFDQEQPSNPILWGSPQNPQSQLLAFLRATXXXXXXXXXXXXXXXXSK 107
             S+I KS LG GFD E PSNPILW SPQN  S LLA LRAT                 K
Sbjct: 136 AVSEIGKSGLGGGFDHEIPSNPILWASPQN--SHLLALLRAT-QNPNPNPSPISNSVTVK 192

Query: 106 DEGHMIGSHVSLESAAVTGALNARTIGL 23
           D+G MIGSH++ ES   T AL   TI +
Sbjct: 193 DDGVMIGSHMTSESGVGT-ALTGETINI 219