BLASTX nr result

ID: Coptis24_contig00024325 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024325
         (430 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36825.3| unnamed protein product [Vitis vinifera]              204   8e-51
ref|XP_002531876.1| Indole-3-acetic acid-amido synthetase GH3.17...   204   8e-51
ref|XP_002263353.1| PREDICTED: putative indole-3-acetic acid-ami...   204   8e-51
ref|XP_002302704.1| GH3 family protein [Populus trichocarpa] gi|...   202   2e-50
ref|XP_003518956.1| PREDICTED: putative indole-3-acetic acid-ami...   189   2e-46

>emb|CBI36825.3| unnamed protein product [Vitis vinifera]
          Length = 548

 Score =  204 bits (518), Expect = 8e-51
 Identities = 101/130 (77%), Positives = 113/130 (86%)
 Frame = +3

Query: 39  MDGKRLEYKGEEALKELERLTEKSDEVQENILKEILKQNGLTEYLNKYLDGSTEVSAFKS 218
           M+GKRLEY+GEEALKELE+ T K+DEVQENILKEI+ +N  TEYL KY+ GS +V  FK 
Sbjct: 1   MEGKRLEYRGEEALKELEKFTAKADEVQENILKEIIARNCETEYLKKYMGGSKDVLEFKQ 60

Query: 219 LVPVITYADIRPYIQRIANGEDSSLISGQTITEMLCSSGTSAGEPKLMPSVAEDLDRRTF 398
            VPVITY DI PYIQRIANGEDSSLISG  ITEMLCSSGTS GEPK+MPS+AEDL+RRTF
Sbjct: 61  SVPVITYKDIHPYIQRIANGEDSSLISGHPITEMLCSSGTSGGEPKMMPSIAEDLNRRTF 120

Query: 399 LYNLIMPIIN 428
           LYNLIMPI+N
Sbjct: 121 LYNLIMPIMN 130


>ref|XP_002531876.1| Indole-3-acetic acid-amido synthetase GH3.17, putative [Ricinus
           communis] gi|223528484|gb|EEF30513.1| Indole-3-acetic
           acid-amido synthetase GH3.17, putative [Ricinus
           communis]
          Length = 597

 Score =  204 bits (518), Expect = 8e-51
 Identities = 99/130 (76%), Positives = 116/130 (89%)
 Frame = +3

Query: 39  MDGKRLEYKGEEALKELERLTEKSDEVQENILKEILKQNGLTEYLNKYLDGSTEVSAFKS 218
           MDGK+LEYKGE AL+E+E+LTEK+DEVQE+IL+EIL QNG TEYL+KY+ GS +V  FK 
Sbjct: 1   MDGKKLEYKGEAALEEIEKLTEKADEVQESILREILIQNGQTEYLSKYIKGSKDVKEFKY 60

Query: 219 LVPVITYADIRPYIQRIANGEDSSLISGQTITEMLCSSGTSAGEPKLMPSVAEDLDRRTF 398
            VPV TY D+ PYIQRIANGEDSSLI+G+ ITEMLCSSGTSAGEPKLMPS+ EDLDRRTF
Sbjct: 61  CVPVTTYKDMYPYIQRIANGEDSSLITGRPITEMLCSSGTSAGEPKLMPSINEDLDRRTF 120

Query: 399 LYNLIMPIIN 428
           +YNL+MPI+N
Sbjct: 121 IYNLVMPIMN 130


>ref|XP_002263353.1| PREDICTED: putative indole-3-acetic acid-amido synthetase GH3.9
           [Vitis vinifera]
          Length = 596

 Score =  204 bits (518), Expect = 8e-51
 Identities = 101/130 (77%), Positives = 113/130 (86%)
 Frame = +3

Query: 39  MDGKRLEYKGEEALKELERLTEKSDEVQENILKEILKQNGLTEYLNKYLDGSTEVSAFKS 218
           M+GKRLEY+GEEALKELE+ T K+DEVQENILKEI+ +N  TEYL KY+ GS +V  FK 
Sbjct: 1   MEGKRLEYRGEEALKELEKFTAKADEVQENILKEIIARNCETEYLKKYMGGSKDVLEFKQ 60

Query: 219 LVPVITYADIRPYIQRIANGEDSSLISGQTITEMLCSSGTSAGEPKLMPSVAEDLDRRTF 398
            VPVITY DI PYIQRIANGEDSSLISG  ITEMLCSSGTS GEPK+MPS+AEDL+RRTF
Sbjct: 61  SVPVITYKDIHPYIQRIANGEDSSLISGHPITEMLCSSGTSGGEPKMMPSIAEDLNRRTF 120

Query: 399 LYNLIMPIIN 428
           LYNLIMPI+N
Sbjct: 121 LYNLIMPIMN 130


>ref|XP_002302704.1| GH3 family protein [Populus trichocarpa]
           gi|222844430|gb|EEE81977.1| GH3 family protein [Populus
           trichocarpa]
          Length = 596

 Score =  202 bits (514), Expect = 2e-50
 Identities = 100/130 (76%), Positives = 113/130 (86%)
 Frame = +3

Query: 39  MDGKRLEYKGEEALKELERLTEKSDEVQENILKEILKQNGLTEYLNKYLDGSTEVSAFKS 218
           MDGK+LEYKG  ALKE+ERLTEK+DEVQE ILK IL QNG TEYL+KY+ GS +V  FK 
Sbjct: 1   MDGKKLEYKGWVALKEIERLTEKADEVQETILKAILMQNGETEYLSKYMKGSKDVDEFKF 60

Query: 219 LVPVITYADIRPYIQRIANGEDSSLISGQTITEMLCSSGTSAGEPKLMPSVAEDLDRRTF 398
            VPVITY D+ PYIQRIA GEDSSL++G  +TEMLCSSGTSAGEPKLMPS+AEDLDRRTF
Sbjct: 61  HVPVITYKDVCPYIQRIATGEDSSLVTGHPVTEMLCSSGTSAGEPKLMPSIAEDLDRRTF 120

Query: 399 LYNLIMPIIN 428
           +YNLIMPI+N
Sbjct: 121 VYNLIMPIMN 130


>ref|XP_003518956.1| PREDICTED: putative indole-3-acetic acid-amido synthetase
           GH3.9-like [Glycine max]
          Length = 606

 Score =  189 bits (481), Expect = 2e-46
 Identities = 96/133 (72%), Positives = 112/133 (84%), Gaps = 3/133 (2%)
 Frame = +3

Query: 39  MDGKRLEYKGEEALKELERLTEKSDEVQENILKEILKQNGLTEYLNKYLDG---STEVSA 209
           MDGK+LEYKGEEALKE+ERLT K+ EVQE +LK+IL QN  TEYLNKY+ G   +T+++ 
Sbjct: 1   MDGKKLEYKGEEALKEIERLTMKAAEVQEGLLKQILTQNRETEYLNKYMRGEKNTTDIAE 60

Query: 210 FKSLVPVITYADIRPYIQRIANGEDSSLISGQTITEMLCSSGTSAGEPKLMPSVAEDLDR 389
           FK  VPV TY  I PYIQRIANGEDSSLI+   ITEMLCSSGTS+GEPK+MPS+AEDL+R
Sbjct: 61  FKRCVPVTTYERIFPYIQRIANGEDSSLITSHPITEMLCSSGTSSGEPKMMPSIAEDLER 120

Query: 390 RTFLYNLIMPIIN 428
           RTF+YNLI PIIN
Sbjct: 121 RTFVYNLITPIIN 133


Top