BLASTX nr result

ID: Coptis24_contig00024313 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024313
         (519 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFH57280.1| putative peripheral-type benzodiazepine receptor ...   140   1e-31
emb|CAH10765.1| peripheral-type benzodiazepine receptor [Solanum...   138   5e-31
ref|XP_002263702.1| PREDICTED: uncharacterized protein LOC100267...   135   3e-30
ref|XP_002531881.1| peripheral-type benzodiazepine receptor, put...   133   1e-29
ref|XP_002321017.1| predicted protein [Populus trichocarpa] gi|2...   132   4e-29

>gb|AFH57280.1| putative peripheral-type benzodiazepine receptor [Gossypium
           hirsutum]
          Length = 189

 Score =  140 bits (352), Expect = 1e-31
 Identities = 67/104 (64%), Positives = 79/104 (75%)
 Frame = -3

Query: 325 MAMAKRGLRSLTIAIVLPLILTFITIYLFSRSGQNYYNLKRPFWFPSLWALHTGYIVSSL 146
           MAMAKRGLRSL IA+  PL LT + IYLF  SG+ Y +L +PFWFP LW LHTG + SS 
Sbjct: 34  MAMAKRGLRSLVIAVSFPLSLTLLNIYLFG-SGRGYASLAKPFWFPPLWLLHTGCLASSF 92

Query: 145 LMGLSAWLVWAEGGFHKQPSAVPLYLGQLLLSLAWYPLVFKVGA 14
           LMGLSAW VW EGGFH +P+A+ LYLG L LS+AW+P V  +GA
Sbjct: 93  LMGLSAWFVWVEGGFHVKPTALSLYLGYLGLSMAWHPTVLWMGA 136


>emb|CAH10765.1| peripheral-type benzodiazepine receptor [Solanum tuberosum]
          Length = 192

 Score =  138 bits (347), Expect = 5e-31
 Identities = 68/102 (66%), Positives = 82/102 (80%)
 Frame = -3

Query: 319 MAKRGLRSLTIAIVLPLILTFITIYLFSRSGQNYYNLKRPFWFPSLWALHTGYIVSSLLM 140
           +AKRGL+SLTIA+ +PL+LT I I LF  S Q Y ++++PFWFP LWALH   + SSLLM
Sbjct: 50  IAKRGLKSLTIALTIPLLLTLIDISLFGSSYQ-YVSMEKPFWFPRLWALHLACLGSSLLM 108

Query: 139 GLSAWLVWAEGGFHKQPSAVPLYLGQLLLSLAWYPLVFKVGA 14
           GLSAWLVWAEGGFH++P A+ LYL QL LSLAW P+VFK GA
Sbjct: 109 GLSAWLVWAEGGFHRKPMAMLLYLSQLGLSLAWDPVVFKSGA 150


>ref|XP_002263702.1| PREDICTED: uncharacterized protein LOC100267613 [Vitis vinifera]
          Length = 185

 Score =  135 bits (341), Expect = 3e-30
 Identities = 74/135 (54%), Positives = 87/135 (64%)
 Frame = -3

Query: 421 MASQNLKQRXXXXXXXXXXXXXXXXXXXXXXKMAMAKRGLRSLTIAIVLPLILTFITIYL 242
           MAS NLKQR                       MAMAKRGLRSLT A+ +PL LT +TIY 
Sbjct: 1   MASTNLKQRIKDGPSTPFPTNNTTKREKK---MAMAKRGLRSLTTAVSIPLSLTLVTIY- 56

Query: 241 FSRSGQNYYNLKRPFWFPSLWALHTGYIVSSLLMGLSAWLVWAEGGFHKQPSAVPLYLGQ 62
           FS +   Y  L +PFWFP LWA+H   + SSLLMGLSAWLVWAEGGFHK+P+A+PL++ Q
Sbjct: 57  FSGATDRYRTLPKPFWFPPLWAVHATSMASSLLMGLSAWLVWAEGGFHKKPTALPLFVAQ 116

Query: 61  LLLSLAWYPLVFKVG 17
           L LSL   P+VF  G
Sbjct: 117 LALSLIRDPIVFGYG 131


>ref|XP_002531881.1| peripheral-type benzodiazepine receptor, putative [Ricinus
           communis] gi|223528489|gb|EEF30518.1| peripheral-type
           benzodiazepine receptor, putative [Ricinus communis]
          Length = 190

 Score =  133 bits (335), Expect = 1e-29
 Identities = 65/108 (60%), Positives = 78/108 (72%), Gaps = 1/108 (0%)
 Frame = -3

Query: 325 MAMAKRGLRSLTIAIVLPLILTFITIYLF-SRSGQNYYNLKRPFWFPSLWALHTGYIVSS 149
           MAMAKRG+RSL IA+  PL LT   IY F SR+G    + K PFWFP +WALH   + SS
Sbjct: 34  MAMAKRGIRSLAIAVAFPLSLTLFNIYFFGSRNGYGPLSTK-PFWFPPMWALHFTCLASS 92

Query: 148 LLMGLSAWLVWAEGGFHKQPSAVPLYLGQLLLSLAWYPLVFKVGARWI 5
            LMGLSAWLVWAEGGFHK+P+A+  YL QL L L W P+VF++ A W+
Sbjct: 93  FLMGLSAWLVWAEGGFHKKPAALSFYLAQLGLGLIWDPIVFRMDATWV 140


>ref|XP_002321017.1| predicted protein [Populus trichocarpa] gi|222861790|gb|EEE99332.1|
           predicted protein [Populus trichocarpa]
          Length = 199

 Score =  132 bits (331), Expect = 4e-29
 Identities = 63/110 (57%), Positives = 79/110 (71%), Gaps = 3/110 (2%)
 Frame = -3

Query: 325 MAMAKRGLRSLTIAIVLPLILTFITIYLFSRS---GQNYYNLKRPFWFPSLWALHTGYIV 155
           +AMAKRG+RSL IA+ LPL LT   +Y F  +   G +  ++  PFWFP  WALH   + 
Sbjct: 40  VAMAKRGIRSLAIAVALPLSLTISNLYFFGTTRGYGTSTGSISMPFWFPPPWALHLTCMT 99

Query: 154 SSLLMGLSAWLVWAEGGFHKQPSAVPLYLGQLLLSLAWYPLVFKVGARWI 5
           SS LMGLSAWLVWAEGGFH+ P+A+ LYL QL LSLAW P+VF++ A W+
Sbjct: 100 SSFLMGLSAWLVWAEGGFHRNPAALYLYLAQLGLSLAWEPIVFRMAAPWV 149


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