BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024297
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274514.2| PREDICTED: pentatricopeptide repeat-containi...   138   5e-31
emb|CBI28334.3| unnamed protein product [Vitis vinifera]              138   5e-31
emb|CAN60740.1| hypothetical protein VITISV_030210 [Vitis vinifera]   135   3e-30
ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containi...    98   6e-19
gb|AEX10959.1| hypothetical protein 0_10719_01 [Pinus taeda] gi|...    98   8e-19

>ref|XP_002274514.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 616

 Score =  138 bits (347), Expect = 5e-31
 Identities = 66/97 (68%), Positives = 82/97 (84%)
 Frame = +2

Query: 2   DDVAKVRLMMKERRVRKIPGCSSILVNGKIHEFLVGKDMDLRYRSMILQKMEEVMCRLKL 181
           DDVAK+RLMM++R V+KI GCSS+LVNGK+HEFL+GK++D  Y   +L K+ EV+ RLKL
Sbjct: 463 DDVAKIRLMMRQRGVKKIAGCSSMLVNGKVHEFLLGKELDSSYSGQVLAKIAEVVSRLKL 522

Query: 182 AGYKSDLTQVLLDVEEEGKEILLTHHSEKMALAFGLI 292
            GY+ DLTQVLLD+E+EGKE LL  HSEKMA+AFGLI
Sbjct: 523 QGYEPDLTQVLLDIEDEGKESLLNLHSEKMAIAFGLI 559


>emb|CBI28334.3| unnamed protein product [Vitis vinifera]
          Length = 604

 Score =  138 bits (347), Expect = 5e-31
 Identities = 66/97 (68%), Positives = 82/97 (84%)
 Frame = +2

Query: 2   DDVAKVRLMMKERRVRKIPGCSSILVNGKIHEFLVGKDMDLRYRSMILQKMEEVMCRLKL 181
           DDVAK+RLMM++R V+KI GCSS+LVNGK+HEFL+GK++D  Y   +L K+ EV+ RLKL
Sbjct: 451 DDVAKIRLMMRQRGVKKIAGCSSMLVNGKVHEFLLGKELDSSYSGQVLAKIAEVVSRLKL 510

Query: 182 AGYKSDLTQVLLDVEEEGKEILLTHHSEKMALAFGLI 292
            GY+ DLTQVLLD+E+EGKE LL  HSEKMA+AFGLI
Sbjct: 511 QGYEPDLTQVLLDIEDEGKESLLNLHSEKMAIAFGLI 547


>emb|CAN60740.1| hypothetical protein VITISV_030210 [Vitis vinifera]
          Length = 1033

 Score =  135 bits (340), Expect = 3e-30
 Identities = 65/97 (67%), Positives = 80/97 (82%)
 Frame = +2

Query: 2   DDVAKVRLMMKERRVRKIPGCSSILVNGKIHEFLVGKDMDLRYRSMILQKMEEVMCRLKL 181
           DDVAK+RLMM++R V+KI GCSS+LV+GK+HEFL GK++D  Y   +L K+ EV+ RLKL
Sbjct: 494 DDVAKIRLMMRQRGVKKIAGCSSMLVBGKVHEFLXGKELDSSYSGQVLAKIAEVVSRLKL 553

Query: 182 AGYKSDLTQVLLDVEEEGKEILLTHHSEKMALAFGLI 292
            GY+ DLTQVLLD+E+EGKE LL  HSEKMA AFGLI
Sbjct: 554 QGYEPDLTQVLLDIEDEGKESLLNLHSEKMAXAFGLI 590


>ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g22690-like [Glycine max]
          Length = 836

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 53/96 (55%), Positives = 67/96 (69%)
 Frame = +2

Query: 5   DVAKVRLMMKERRVRKIPGCSSILVNGKIHEFLVGKDMDLRYRSMILQKMEEVMCRLKLA 184
           DVA+VRL MKE+ V+K+PG SSI V G IHEF  G +       + L  +EE+ CRL  A
Sbjct: 685 DVARVRLQMKEKGVQKVPGSSSIEVQGLIHEFTSGDESHAENTHIGLM-LEEINCRLSEA 743

Query: 185 GYKSDLTQVLLDVEEEGKEILLTHHSEKMALAFGLI 292
           GY  D T VLLDV+E+ KE LL+ HSEK+A+A+GLI
Sbjct: 744 GYVPDTTNVLLDVDEQEKEHLLSRHSEKLAMAYGLI 779


>gb|AEX10959.1| hypothetical protein 0_10719_01 [Pinus taeda]
           gi|367059930|gb|AEX10960.1| hypothetical protein
           0_10719_01 [Pinus taeda] gi|367059932|gb|AEX10961.1|
           hypothetical protein 0_10719_01 [Pinus taeda]
           gi|367059934|gb|AEX10962.1| hypothetical protein
           0_10719_01 [Pinus taeda] gi|367059936|gb|AEX10963.1|
           hypothetical protein 0_10719_01 [Pinus taeda]
           gi|367059938|gb|AEX10964.1| hypothetical protein
           0_10719_01 [Pinus taeda] gi|367059940|gb|AEX10965.1|
           hypothetical protein 0_10719_01 [Pinus taeda]
           gi|367059942|gb|AEX10966.1| hypothetical protein
           0_10719_01 [Pinus taeda] gi|367059944|gb|AEX10967.1|
           hypothetical protein 0_10719_01 [Pinus taeda]
           gi|367059946|gb|AEX10968.1| hypothetical protein
           0_10719_01 [Pinus taeda] gi|367059948|gb|AEX10969.1|
           hypothetical protein 0_10719_01 [Pinus taeda]
          Length = 153

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 52/99 (52%), Positives = 69/99 (69%)
 Frame = +2

Query: 2   DDVAKVRLMMKERRVRKIPGCSSILVNGKIHEFLVGKDMDLRYRSMILQKMEEVMCRLKL 181
           DDV KVR MMKER V+KIPGCS + VN K++ F +G+   L+ +  I  ++E +  ++K 
Sbjct: 1   DDVGKVRKMMKERDVKKIPGCSWVEVNNKVYAFAIGEQQYLQ-KQKIFAELERLSGQMKE 59

Query: 182 AGYKSDLTQVLLDVEEEGKEILLTHHSEKMALAFGLIRS 298
           AGY  D   VL DVE+E KE +L HHSEK+ALAFGLI +
Sbjct: 60  AGYVPDKNFVLHDVEDEQKEHVLYHHSEKLALAFGLINT 98