BLASTX nr result

ID: Coptis24_contig00024289 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024289
         (430 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004157665.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-r...    79   5e-13
ref|XP_004134381.1| PREDICTED: uncharacterized protein LOC101205...    79   5e-13
ref|XP_003556887.1| PREDICTED: uncharacterized protein LOC100796...    76   3e-12
ref|XP_003535221.1| PREDICTED: uncharacterized protein LOC100789...    76   3e-12
ref|XP_002304703.1| predicted protein [Populus trichocarpa] gi|2...    75   4e-12

>ref|XP_004157665.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-related-like [Cucumis
           sativus]
          Length = 259

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 30/33 (90%), Positives = 33/33 (100%)
 Frame = +1

Query: 4   IRHLPCLHKFHKDCIDPWLRRKTSCPICKCSIT 102
           IRHLPCLHKFHKDCIDPWL+R+TSCP+CKCSIT
Sbjct: 227 IRHLPCLHKFHKDCIDPWLQRRTSCPVCKCSIT 259


>ref|XP_004134381.1| PREDICTED: uncharacterized protein LOC101205482 [Cucumis sativus]
          Length = 803

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 30/33 (90%), Positives = 33/33 (100%)
 Frame = +1

Query: 4   IRHLPCLHKFHKDCIDPWLRRKTSCPICKCSIT 102
           IRHLPCLHKFHKDCIDPWL+R+TSCP+CKCSIT
Sbjct: 771 IRHLPCLHKFHKDCIDPWLQRRTSCPVCKCSIT 803


>ref|XP_003556887.1| PREDICTED: uncharacterized protein LOC100796218 [Glycine max]
          Length = 470

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 30/34 (88%), Positives = 32/34 (94%)
 Frame = +1

Query: 1   TIRHLPCLHKFHKDCIDPWLRRKTSCPICKCSIT 102
           TIRHLPCLHKFHKDCIDPWL+RK SCP+CK SIT
Sbjct: 437 TIRHLPCLHKFHKDCIDPWLQRKASCPVCKSSIT 470


>ref|XP_003535221.1| PREDICTED: uncharacterized protein LOC100789823 [Glycine max]
          Length = 735

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 30/33 (90%), Positives = 32/33 (96%)
 Frame = +1

Query: 4   IRHLPCLHKFHKDCIDPWLRRKTSCPICKCSIT 102
           IRHLPCLHKFHKDCIDPWL+RKTSCP+CK SIT
Sbjct: 703 IRHLPCLHKFHKDCIDPWLQRKTSCPVCKSSIT 735


>ref|XP_002304703.1| predicted protein [Populus trichocarpa] gi|222842135|gb|EEE79682.1|
           predicted protein [Populus trichocarpa]
          Length = 740

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 31/33 (93%), Positives = 31/33 (93%)
 Frame = +1

Query: 4   IRHLPCLHKFHKDCIDPWLRRKTSCPICKCSIT 102
           IRHLPCLHKFHKDCIDPWL RKTSCPICK SIT
Sbjct: 707 IRHLPCLHKFHKDCIDPWLSRKTSCPICKSSIT 739


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