BLASTX nr result

ID: Coptis24_contig00024275 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024275
         (878 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284383.1| PREDICTED: oxysterol-binding protein-related...   293   3e-77
ref|XP_003544768.1| PREDICTED: oxysterol-binding protein-related...   290   3e-76
ref|XP_003543786.1| PREDICTED: oxysterol-binding protein-related...   283   3e-74
ref|NP_001236590.1| oxysterol-binding protein [Glycine max] gi|1...   280   2e-73
ref|XP_002513820.1| Oxysterol-binding protein, putative [Ricinus...   278   2e-72

>ref|XP_002284383.1| PREDICTED: oxysterol-binding protein-related protein 1C [Vitis
           vinifera] gi|302141870|emb|CBI19073.3| unnamed protein
           product [Vitis vinifera]
          Length = 797

 Score =  293 bits (751), Expect = 3e-77
 Identities = 157/224 (70%), Positives = 175/224 (78%), Gaps = 2/224 (0%)
 Frame = +1

Query: 1   FVLQDGVLSYYKTHGPDK--VKDFDTKSTKIIGEDSFRFVSRHKNHCPVSHSHPNPVGEV 174
           FVLQDGVLSYYK HGPDK  V     K +K+IGE+S R ++RH+N    S    NPVGEV
Sbjct: 110 FVLQDGVLSYYKIHGPDKIIVNQETEKGSKVIGEESLRRINRHRNGN--SQLRRNPVGEV 167

Query: 175 HLKVSSIRESKSDDKRFSIFTGTKRLHLRAEAREDRVAWMEALQAMKDMFPRMSNSELMA 354
           HLKVSS+RESKSDDKRFSIFTGTKR+HLRAE REDR AWM+ALQA+KDMFPRMSNSELMA
Sbjct: 168 HLKVSSVRESKSDDKRFSIFTGTKRMHLRAETREDRAAWMDALQAVKDMFPRMSNSELMA 227

Query: 355 PVDNAAVLTEKLRQRLLDEGVNESAILDSEQIMRSEFXXXXXXXXXXXXXXXXXIDTLRY 534
           P+DN  V TEKLRQRLL+EGV+E+AI DSEQIMRSEF                 IDTLR+
Sbjct: 228 PLDNVTVSTEKLRQRLLEEGVSEAAIQDSEQIMRSEFAALQNQIVLLKQKQLLLIDTLRH 287

Query: 535 LETEKVDLENTLVDESQRQSNEHEASFRLRQEKFSDASGSGSED 666
           LETEKVDLENTLVDESQRQ  E  AS RLRQ+K+S+ SGS SED
Sbjct: 288 LETEKVDLENTLVDESQRQLKEQGASSRLRQDKYSEGSGSESED 331


>ref|XP_003544768.1| PREDICTED: oxysterol-binding protein-related protein 1C-like
           isoform 1 [Glycine max]
          Length = 781

 Score =  290 bits (742), Expect = 3e-76
 Identities = 164/294 (55%), Positives = 191/294 (64%), Gaps = 2/294 (0%)
 Frame = +1

Query: 1   FVLQDGVLSYYKTHGPDK--VKDFDTKSTKIIGEDSFRFVSRHKNHCPVSHSHPNPVGEV 174
           FVLQDGVLSYYK HGPDK  V     K +K+IG++S R +SR++N   V+H    PVGE+
Sbjct: 90  FVLQDGVLSYYKIHGPDKIVVNSETEKGSKVIGDESARMISRNRNSTHVNHRR-KPVGEI 148

Query: 175 HLKVSSIRESKSDDKRFSIFTGTKRLHLRAEAREDRVAWMEALQAMKDMFPRMSNSELMA 354
           HLKVS+IRES+SDDKRFSIFTGTKRLHLRA+ REDRVAWMEALQA+KDMFPR+SNSELMA
Sbjct: 149 HLKVSTIRESRSDDKRFSIFTGTKRLHLRADTREDRVAWMEALQAVKDMFPRISNSELMA 208

Query: 355 PVDNAAVLTEKLRQRLLDEGVNESAILDSEQIMRSEFXXXXXXXXXXXXXXXXXIDTLRY 534
           PVDN A+ TEKLR RL++EGV+E+AI DSEQIMR+E+                 IDTLR 
Sbjct: 209 PVDNVAISTEKLRHRLVEEGVSEAAIQDSEQIMRNEYAALQNQLLLLKQKQVTLIDTLRQ 268

Query: 535 LETEKVDLENTLVDESQRQSNEHEASFRLRQEKFSDASGSGSEDSXXXXXXXXXXXXXXX 714
           LETEKVDLENT+VDESQRQ N+ EAS RLRQEK S+AS S SED                
Sbjct: 269 LETEKVDLENTVVDESQRQLNDQEASSRLRQEKSSEASASESEDDNERNDAVEEETDEDD 328

Query: 715 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLYTFDSENGVEASIRDVGTS 876
                                             LYT +SE  V+ SIR V T+
Sbjct: 329 TAFFDTRDFLSSSNSFKSNGSDIRVSSFSSDDDGLYTVESEEDVDPSIRSVVTN 382


>ref|XP_003543786.1| PREDICTED: oxysterol-binding protein-related protein 1C-like
           [Glycine max]
          Length = 787

 Score =  283 bits (725), Expect = 3e-74
 Identities = 147/224 (65%), Positives = 175/224 (78%), Gaps = 2/224 (0%)
 Frame = +1

Query: 1   FVLQDGVLSYYKTHGPDK--VKDFDTKSTKIIGEDSFRFVSRHKNHCPVSHSHPNPVGEV 174
           FVLQDGVLSYYK HGPDK  V     K +K+IG++S R +SR++N     +    P+GE+
Sbjct: 95  FVLQDGVLSYYKIHGPDKIVVNSETEKGSKVIGDESARMISRNRNSNHAVNHRRKPLGEI 154

Query: 175 HLKVSSIRESKSDDKRFSIFTGTKRLHLRAEAREDRVAWMEALQAMKDMFPRMSNSELMA 354
           HLK+S+IRES+SDDKRFS+FTGTKRLHLRA+ REDRVAW+EALQA+KDMFPR+SNSELMA
Sbjct: 155 HLKISTIRESRSDDKRFSVFTGTKRLHLRADTREDRVAWVEALQAVKDMFPRISNSELMA 214

Query: 355 PVDNAAVLTEKLRQRLLDEGVNESAILDSEQIMRSEFXXXXXXXXXXXXXXXXXIDTLRY 534
           PVDN AV TEKLR RL++EGV+E+AI D+EQIMR+E+                 IDTLR 
Sbjct: 215 PVDNVAVSTEKLRHRLMEEGVSEAAIQDTEQIMRNEYAALQNQLQLLKQKQVALIDTLRQ 274

Query: 535 LETEKVDLENTLVDESQRQSNEHEASFRLRQEKFSDASGSGSED 666
           LETEKVDLENT+VDESQRQ N+ EAS RLRQEK S+AS S SED
Sbjct: 275 LETEKVDLENTVVDESQRQLNDQEASSRLRQEKSSEASASESED 318


>ref|NP_001236590.1| oxysterol-binding protein [Glycine max]
           gi|164457637|dbj|BAF96543.1| oxysterol-binding protein
           [Glycine max]
          Length = 789

 Score =  280 bits (717), Expect = 2e-73
 Identities = 150/224 (66%), Positives = 171/224 (76%), Gaps = 2/224 (0%)
 Frame = +1

Query: 1   FVLQDGVLSYYKTHGPDK--VKDFDTKSTKIIGEDSFRFVSRHKNHCPVSHSHPNPVGEV 174
           FVLQDGVLSYYK HGPDK  V     K + +IGE+S R ++R++N  P  H    P GE+
Sbjct: 95  FVLQDGVLSYYKIHGPDKIVVNPETEKGSMVIGEESMRRITRNRNSYPSQHIR-KPFGEI 153

Query: 175 HLKVSSIRESKSDDKRFSIFTGTKRLHLRAEAREDRVAWMEALQAMKDMFPRMSNSELMA 354
           HLKVS+IRESKSD+KRFS+FTGTKRLHLRAE REDRVAWMEALQA+KDMFPRMSNSELMA
Sbjct: 154 HLKVSTIRESKSDEKRFSVFTGTKRLHLRAETREDRVAWMEALQAVKDMFPRMSNSELMA 213

Query: 355 PVDNAAVLTEKLRQRLLDEGVNESAILDSEQIMRSEFXXXXXXXXXXXXXXXXXIDTLRY 534
           PVDN  V TEKLR RL++EGV+E+AI DSEQIMR+EF                 IDTLR 
Sbjct: 214 PVDNVTVSTEKLRVRLMEEGVSEAAIQDSEQIMRTEFAALQSQLVLLKQKHSALIDTLRQ 273

Query: 535 LETEKVDLENTLVDESQRQSNEHEASFRLRQEKFSDASGSGSED 666
           LETEKVDLE+T+VDESQRQ N  EAS RL QEKFS+ + S SED
Sbjct: 274 LETEKVDLEDTVVDESQRQWNGEEASSRLAQEKFSEGTASESED 317


>ref|XP_002513820.1| Oxysterol-binding protein, putative [Ricinus communis]
           gi|223546906|gb|EEF48403.1| Oxysterol-binding protein,
           putative [Ricinus communis]
          Length = 795

 Score =  278 bits (710), Expect = 2e-72
 Identities = 151/225 (67%), Positives = 173/225 (76%), Gaps = 3/225 (1%)
 Frame = +1

Query: 1   FVLQDGVLSYYKTHGPDK--VKDFDTKSTKIIGEDSFRFVSRHKNHCPVSHSHP-NPVGE 171
           FVLQDGVLSYYK HGPDK  V     K +K+IGE+S R +SR  N+    H    NPVGE
Sbjct: 105 FVLQDGVLSYYKIHGPDKIIVNRETEKGSKVIGEESMRRLSRPNNNNGHYHQPKRNPVGE 164

Query: 172 VHLKVSSIRESKSDDKRFSIFTGTKRLHLRAEAREDRVAWMEALQAMKDMFPRMSNSELM 351
           +HLKVSSIRES+SDDKRFSIFTGTKRLHLRAE REDR+AWMEALQA+KDMFPRMSNSELM
Sbjct: 165 IHLKVSSIRESRSDDKRFSIFTGTKRLHLRAETREDRLAWMEALQAVKDMFPRMSNSELM 224

Query: 352 APVDNAAVLTEKLRQRLLDEGVNESAILDSEQIMRSEFXXXXXXXXXXXXXXXXXIDTLR 531
           AP++N  V TEKLRQRLL+EGV+E+AI DSEQIMR+EF                 IDTLR
Sbjct: 225 APIENVVVSTEKLRQRLLEEGVSEAAIEDSEQIMRNEFSSLQNQIVLLKQKQWLLIDTLR 284

Query: 532 YLETEKVDLENTLVDESQRQSNEHEASFRLRQEKFSDASGSGSED 666
            LETEKVDLENT+VDESQRQ N+  +S  LRQ+K S+AS + S+D
Sbjct: 285 QLETEKVDLENTVVDESQRQFNDQGSSSILRQDKSSEASATESDD 329


Top