BLASTX nr result

ID: Coptis24_contig00024269 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024269
         (878 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002262985.1| PREDICTED: bet1-like SNARE 1-1 [Vitis vinife...   163   4e-38
gb|ACD62528.1| bet1-like snare 1-1 [Malus x domestica]                159   8e-37
gb|AFK36257.1| unknown [Medicago truncatula]                          156   5e-36
ref|XP_002285680.1| PREDICTED: bet1-like SNARE 1-1 [Vitis vinife...   156   5e-36
ref|NP_191376.1| Bet1-like SNARE 1-1 [Arabidopsis thaliana] gi|2...   156   7e-36

>ref|XP_002262985.1| PREDICTED: bet1-like SNARE 1-1 [Vitis vinifera]
           gi|297744115|emb|CBI37085.3| unnamed protein product
           [Vitis vinifera]
          Length = 123

 Score =  163 bits (413), Expect = 4e-38
 Identities = 79/110 (71%), Positives = 96/110 (87%), Gaps = 2/110 (1%)
 Frame = +3

Query: 102 MNLRREHRGNRSALFDGIEEGGIRAT--VYSHDVNDHDNEKALDGLHDRVNLLRTLTGDI 275
           MN RR++RGNR ALFDGIEEGGIRA+    SH++++HDNE+A+DGL DRVNLL+ LTGDI
Sbjct: 1   MNSRRDYRGNRIALFDGIEEGGIRASSSYSSHEIDEHDNERAVDGLQDRVNLLKRLTGDI 60

Query: 276 HEEVNSHNRVLDGMGNDMDASRGTMSGTMDRFKSVFKTKSSRRTFTLAST 425
           HEEV SHNR+LD +GNDMDASRG +SGTMDRFK VF+T+SSRR FTL ++
Sbjct: 61  HEEVESHNRMLDRVGNDMDASRGILSGTMDRFKMVFETRSSRRMFTLVAS 110


>gb|ACD62528.1| bet1-like snare 1-1 [Malus x domestica]
          Length = 122

 Score =  159 bits (402), Expect = 8e-37
 Identities = 74/109 (67%), Positives = 95/109 (87%), Gaps = 1/109 (0%)
 Frame = +3

Query: 102 MNLRREHRGNRSALFDGIEEGGIRATV-YSHDVNDHDNEKALDGLHDRVNLLRTLTGDIH 278
           MN RR+ RGN+ ALFDGIEEGGIR++  YSH++++HDNE+A+DGL DRVNLL+ L+GDIH
Sbjct: 1   MNARRDFRGNKVALFDGIEEGGIRSSASYSHEIDEHDNERAVDGLQDRVNLLKRLSGDIH 60

Query: 279 EEVNSHNRVLDGMGNDMDASRGTMSGTMDRFKSVFKTKSSRRTFTLAST 425
           EEV +HN +LD MGNDMD+SRG +SGTMD+FK VF+TKSS+R FTL ++
Sbjct: 61  EEVETHNHMLDRMGNDMDSSRGVLSGTMDKFKMVFETKSSQRMFTLVAS 109


>gb|AFK36257.1| unknown [Medicago truncatula]
          Length = 127

 Score =  156 bits (395), Expect = 5e-36
 Identities = 76/113 (67%), Positives = 95/113 (84%), Gaps = 5/113 (4%)
 Frame = +3

Query: 102 MNLRREHRGNRSALFDGIEEGGIRATVY-----SHDVNDHDNEKALDGLHDRVNLLRTLT 266
           MN RR+ R NR ALFDGIEEGGIRA+       SH++++HDNE+A+DGL DRVNLL+ L+
Sbjct: 2   MNSRRDTRNNRVALFDGIEEGGIRASSMYSSGSSHEIDEHDNEQAMDGLQDRVNLLKRLS 61

Query: 267 GDIHEEVNSHNRVLDGMGNDMDASRGTMSGTMDRFKSVFKTKSSRRTFTLAST 425
           GDIHEEV+SHNR+LD MGNDMD+SRG +SGTMD+FK VF+TKSSRR F+L ++
Sbjct: 62  GDIHEEVDSHNRMLDHMGNDMDSSRGVLSGTMDKFKMVFETKSSRRMFSLVAS 114


>ref|XP_002285680.1| PREDICTED: bet1-like SNARE 1-1 [Vitis vinifera]
           gi|297741938|emb|CBI33373.3| unnamed protein product
           [Vitis vinifera]
          Length = 122

 Score =  156 bits (395), Expect = 5e-36
 Identities = 76/109 (69%), Positives = 94/109 (86%), Gaps = 1/109 (0%)
 Frame = +3

Query: 102 MNLRREHRGNRSALFDGIEEGGIRATV-YSHDVNDHDNEKALDGLHDRVNLLRTLTGDIH 278
           MN RR+HRGNR+A FDGIEEGGIRA+  YSH++++ DNE A+DGL DRV +L+ LTGDIH
Sbjct: 1   MNSRRDHRGNRAATFDGIEEGGIRASSSYSHEIDEVDNETAVDGLEDRVVMLKRLTGDIH 60

Query: 279 EEVNSHNRVLDGMGNDMDASRGTMSGTMDRFKSVFKTKSSRRTFTLAST 425
           EEV SHNR+LD +GN+MDASRG +SGTM+RFK VF+TKSSRR FTL ++
Sbjct: 61  EEVESHNRMLDRVGNEMDASRGILSGTMERFKMVFETKSSRRMFTLIAS 109


>ref|NP_191376.1| Bet1-like SNARE 1-1 [Arabidopsis thaliana]
           gi|27805428|sp|Q9M2J9.1|BET11_ARATH RecName:
           Full=Bet1-like SNARE 1-1; Short=AtBET11; AltName:
           Full=Bet1/Sft1-like SNARE 14a; Short=AtBS14a
           gi|14030603|gb|AAK52976.1|AF368175_1 Bet1/Sft1-like
           SNARE AtBS14a [Arabidopsis thaliana]
           gi|6735329|emb|CAB68155.1| putative protein [Arabidopsis
           thaliana] gi|26449796|dbj|BAC42021.1| unknown protein
           [Arabidopsis thaliana] gi|28416841|gb|AAO42951.1|
           At3g58170 [Arabidopsis thaliana]
           gi|332646229|gb|AEE79750.1| Bet1-like SNARE 1-1
           [Arabidopsis thaliana]
          Length = 122

 Score =  156 bits (394), Expect = 7e-36
 Identities = 76/109 (69%), Positives = 96/109 (88%), Gaps = 1/109 (0%)
 Frame = +3

Query: 102 MNLRREHRGNRSALFDGIEEGGIRA-TVYSHDVNDHDNEKALDGLHDRVNLLRTLTGDIH 278
           MN RRE RG RS+LFDGIEEGGIRA + YSH++N+H+NE+AL+GL DRV LL+ L+GDI+
Sbjct: 1   MNPRREPRGGRSSLFDGIEEGGIRAASSYSHEINEHENERALEGLQDRVILLKRLSGDIN 60

Query: 279 EEVNSHNRVLDGMGNDMDASRGTMSGTMDRFKSVFKTKSSRRTFTLAST 425
           EEV++HNR+LD MGNDMD+SRG +SGTMDRFK+VF+TKSSRR  TL ++
Sbjct: 61  EEVDTHNRMLDRMGNDMDSSRGFLSGTMDRFKTVFETKSSRRMLTLVAS 109


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