BLASTX nr result

ID: Coptis24_contig00024260 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024260
         (476 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285052.1| PREDICTED: early nodulin-93 [Vitis vinifera]...   136   2e-30
ref|XP_002524454.1| Early nodulin, putative [Ricinus communis] g...   128   5e-28
ref|XP_004167345.1| PREDICTED: early nodulin-93-like [Cucumis sa...   127   9e-28
ref|XP_004139321.1| PREDICTED: early nodulin-93-like [Cucumis sa...   127   9e-28
ref|NP_001240002.1| uncharacterized protein LOC100820292 [Glycin...   125   3e-27

>ref|XP_002285052.1| PREDICTED: early nodulin-93 [Vitis vinifera]
           gi|297738920|emb|CBI28165.3| unnamed protein product
           [Vitis vinifera]
          Length = 107

 Score =  136 bits (342), Expect = 2e-30
 Identities = 75/106 (70%), Positives = 80/106 (75%), Gaps = 1/106 (0%)
 Frame = +3

Query: 63  MANNVVQS-LERNGLASFDQKLAMAKRCSHEXXXXXXXXXXXXXXXXXIPTLASVRMLPW 239
           MA NV  S LERNGLASFDQKLAMAKRCSHE                 IPT+AS R LPW
Sbjct: 1   MAKNVAGSPLERNGLASFDQKLAMAKRCSHEGVVAGAKAAVVASIATAIPTMASARWLPW 60

Query: 240 AKAHLNHTAQALIISTVAGAAYFIVADKTVLASARRNSFKQGGYTD 377
           AKA+LNHTAQALIISTVAGAAYFIVADKTVLASARRNS K+  ++D
Sbjct: 61  AKANLNHTAQALIISTVAGAAYFIVADKTVLASARRNSLKKPCFSD 106


>ref|XP_002524454.1| Early nodulin, putative [Ricinus communis]
           gi|223536242|gb|EEF37894.1| Early nodulin, putative
           [Ricinus communis]
          Length = 108

 Score =  128 bits (321), Expect = 5e-28
 Identities = 72/102 (70%), Positives = 77/102 (75%), Gaps = 2/102 (1%)
 Frame = +3

Query: 63  MANNVVQS-LERN-GLASFDQKLAMAKRCSHEXXXXXXXXXXXXXXXXXIPTLASVRMLP 236
           MA NV QS LE+   +AS DQKLAMAKRCSHE                 IPTLAS RMLP
Sbjct: 1   MAKNVAQSPLEKTCSMASLDQKLAMAKRCSHEGVVAGAKAAVVASIATAIPTLASARMLP 60

Query: 237 WAKAHLNHTAQALIISTVAGAAYFIVADKTVLASARRNSFKQ 362
           WA+A+LNHTAQALIISTVAGAAYFIVADKTVLA+ARRNSFKQ
Sbjct: 61  WARANLNHTAQALIISTVAGAAYFIVADKTVLATARRNSFKQ 102


>ref|XP_004167345.1| PREDICTED: early nodulin-93-like [Cucumis sativus]
          Length = 111

 Score =  127 bits (319), Expect = 9e-28
 Identities = 70/106 (66%), Positives = 77/106 (72%), Gaps = 1/106 (0%)
 Frame = +3

Query: 63  MANNVVQS-LERNGLASFDQKLAMAKRCSHEXXXXXXXXXXXXXXXXXIPTLASVRMLPW 239
           MA N+ Q+ LER  +AS D K+AMAKRC+ E                 IPT ASVRMLPW
Sbjct: 1   MAKNLAQAFLERKNMASHDPKVAMAKRCAKEGVIAGAKAAAIASIATAIPTFASVRMLPW 60

Query: 240 AKAHLNHTAQALIISTVAGAAYFIVADKTVLASARRNSFKQGGYTD 377
           AKAHLNHTAQALIISTVAGAAYFIVADKTVLA+ARRNSFKQ   T+
Sbjct: 61  AKAHLNHTAQALIISTVAGAAYFIVADKTVLATARRNSFKQKPNTE 106


>ref|XP_004139321.1| PREDICTED: early nodulin-93-like [Cucumis sativus]
          Length = 111

 Score =  127 bits (319), Expect = 9e-28
 Identities = 70/106 (66%), Positives = 77/106 (72%), Gaps = 1/106 (0%)
 Frame = +3

Query: 63  MANNVVQS-LERNGLASFDQKLAMAKRCSHEXXXXXXXXXXXXXXXXXIPTLASVRMLPW 239
           MA N+ Q+ LER  +AS D K+AMAKRC+ E                 IPT ASVRMLPW
Sbjct: 1   MAKNLAQAFLERKNIASHDPKVAMAKRCAKEGVIAGAKAAAIASIATAIPTFASVRMLPW 60

Query: 240 AKAHLNHTAQALIISTVAGAAYFIVADKTVLASARRNSFKQGGYTD 377
           AKAHLNHTAQALIISTVAGAAYFIVADKTVLA+ARRNSFKQ   T+
Sbjct: 61  AKAHLNHTAQALIISTVAGAAYFIVADKTVLATARRNSFKQKPNTE 106


>ref|NP_001240002.1| uncharacterized protein LOC100820292 [Glycine max]
           gi|255640544|gb|ACU20557.1| unknown [Glycine max]
          Length = 107

 Score =  125 bits (315), Expect = 3e-27
 Identities = 67/91 (73%), Positives = 71/91 (78%)
 Frame = +3

Query: 84  SLERNGLASFDQKLAMAKRCSHEXXXXXXXXXXXXXXXXXIPTLASVRMLPWAKAHLNHT 263
           S ER+ LAS DQKLAMAKRCSHE                 IPTLASVRMLPWAKA+LNHT
Sbjct: 11  SFERSTLASLDQKLAMAKRCSHEGVMAGAKAAVVATIATAIPTLASVRMLPWAKANLNHT 70

Query: 264 AQALIISTVAGAAYFIVADKTVLASARRNSF 356
           AQALIISTVAGAAYFIVADKTVLA+AR+NSF
Sbjct: 71  AQALIISTVAGAAYFIVADKTVLATARKNSF 101


Top