BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024225
         (1535 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002460118.1| hypothetical protein SORBIDRAFT_02g023020 [S...   153   1e-34
gb|AAM94534.1| putative transposon protein [Oryza sativa Japonic...   142   2e-31
ref|XP_002436888.1| hypothetical protein SORBIDRAFT_10g010620 [S...   141   5e-31
ref|XP_002467291.1| hypothetical protein SORBIDRAFT_01g023040 [S...   138   3e-30
ref|XP_002269076.1| PREDICTED: uncharacterized protein LOC100253...   133   1e-28

>ref|XP_002460118.1| hypothetical protein SORBIDRAFT_02g023020 [Sorghum bicolor]
            gi|241923495|gb|EER96639.1| hypothetical protein
            SORBIDRAFT_02g023020 [Sorghum bicolor]
          Length = 1036

 Score =  153 bits (387), Expect = 1e-34
 Identities = 112/378 (29%), Positives = 175/378 (46%), Gaps = 18/378 (4%)
 Frame = +2

Query: 2    DANNGLFPLAVYICKSESTKTWCRFLEIISPKL--SQHPLTLTIISDKQKGLVEAVSYVF 175
            DANN ++P+A      E+  TW  F+ ++   L  S       +ISD+QKGL++AV  + 
Sbjct: 551  DANNQMYPVAWAAVPIENYDTWYWFISLLQKDLNISDGGSEWVLISDQQKGLLKAVKELV 610

Query: 176  DDTRSHRICFRHMYKNFKKLFKGAILRK--WHGLRPSLTRKWTLKSGWTR*-------DL 328
             +   HR+C RH+Y N++K +    L+K  W   + S T  + L   W          D+
Sbjct: 611  PNAE-HRMCARHIYANWRKKYTDKKLQKKWWRCAKASNTSLFNLYRAWLAEATPEGAADM 669

Query: 329  RRKKQENGSRRKRWNHGDGLVLITHQSVSI*LIIFQSFNNWI*EVRDKPVCNLVDKLHLA 508
                 E+ SR            +     SI   + +SFNN I E R  PV ++ + +   
Sbjct: 670  MTTSPEHWSR--------AYFRLGSNCDSIDNNMCESFNNSIMEARFYPVISMCEAIRKK 721

Query: 509  FMRNIYDRKQKAKKWDDEVDNKFRGLVPKVKQTSKTRIKFIRNYVVEGAENHCFSVKTAY 688
             M  I + + +A+KW+ ++        P + +  K  I+   N +V     H F V+   
Sbjct: 722  LMVRIQENRTRAQKWNGKI-------CPNIFKKLKLSIQLSGNCIVLWNGEHGFEVQERE 774

Query: 689  DTRWIVDLRSKECSCVVWQQFGVPCLHAVAVIYPKRCSWVDFCSHFFTVQAYKQTYAGYI 868
            D R+ V+L+ K+CSC  WQ  G+PC HA++ IY       D+ +  F++ AY  TYA  +
Sbjct: 775  DRRYTVNLQLKQCSCRYWQLSGLPCCHAISAIYKASHKIEDYIAPCFSIDAYMATYAHVL 834

Query: 869  KPMNDMADWSTEIHVIEGVLQIINPPPHVRGIGRPKKQREEDE-DAPSSKK------KRT 1027
            +P+    +W T        +    PP  V+  GRPK QR  ++ + P   K      K T
Sbjct: 835  QPVEGAENWPT------AEMPKPLPPAFVKMPGRPKTQRTREQWEQPKGTKLSRVGVKMT 888

Query: 1028 WKSCHLPDHNSRTCKGLP 1081
             + C   DHNSR C   P
Sbjct: 889  CRLCGKSDHNSRRCPKNP 906


>gb|AAM94534.1| putative transposon protein [Oryza sativa Japonica Group]
            gi|31433228|gb|AAP54770.1| transposon protein, putative,
            Mutator sub-class [Oryza sativa Japonica Group]
          Length = 835

 Score =  142 bits (358), Expect = 2e-31
 Identities = 107/374 (28%), Positives = 176/374 (47%), Gaps = 18/374 (4%)
 Frame = +2

Query: 2    DANNGLFPLAVYICKSESTKTWCRFLEIISPKLSQHPLTLTIISDKQKGLVEAVSYVFDD 181
            D +N +FP+A  + +SEST+ W  F++ +   +   P+ L + +D  KG+   V+ VF++
Sbjct: 446  DGHNWMFPVAYGVFESESTENWAWFMDKLHMAIGS-PVGLVLSTDAGKGIDTTVTRVFNN 504

Query: 182  TRSHRICFRHMYKNFKKLFKGAILRKWHGLRPSLTRKWTLKSGWTR*DLRR----KKQEN 349
               HR C RH+ KNF+K F G +  +           W+    + R D+      + +E 
Sbjct: 505  GVEHRECMRHLVKNFQKRFSGEVFER---------NLWSASRAY-RQDIYEGHYNEMKEA 554

Query: 350  GSRRKRWNHGDGLVLITHQSVS-------I*LIIFQSFNNWI*EVRDKPVCNLVDKLHLA 508
              R   W       + T    S       +   I ++FN+WI   +  PV +L+DK+   
Sbjct: 555  CPRATEWIDDFHKHIWTRSKFSPVSKCDYVTNNIAETFNSWIRHEKSLPVVDLMDKIRHM 614

Query: 509  FMRNIYDRKQKAKKWDDEVDNKFRGLVPKVKQTSKTRIKFIRNYVVEGAENHCFSVK-TA 685
             M  I  RK+ A+K   ++       +P V +T   R + +  Y +  A  H   +  T 
Sbjct: 615  IMERISIRKRLAEKLTGQI-------LPSVMKTLYARSRDL-GYKLYSAHKHLGEIGGTG 666

Query: 686  YDT---RWIVDLRSKECSCVVWQQFGVPCLHAVAVIYPKR-CSWVDFCSHFFTVQAYKQT 853
             D    R  VDL ++ECSC  WQ  G+PC H + +I  +R      F   ++ V A+K+ 
Sbjct: 667  RDLKTWRHTVDLNTRECSCRQWQITGIPCTHVIFLIISRRGLELEQFVDEYYYVAAFKRA 726

Query: 854  YAGYIKPMNDMADWSTEIHVIEGVLQI-INPPPHVRGIGRPKKQREED-EDAPSSKKKRT 1027
            YAG++ PM D A W+      +G + + ++PP   R  GRP+ +R +  E+    K+K  
Sbjct: 727  YAGHVVPMTDKAQWA------KGNIGLKLHPPLLKRSAGRPRSRRIKGVEEGGVGKRKYR 780

Query: 1028 WKSCHLPDHNSRTC 1069
             K C    H  +TC
Sbjct: 781  CKRCGQFGHTKKTC 794


>ref|XP_002436888.1| hypothetical protein SORBIDRAFT_10g010620 [Sorghum bicolor]
            gi|241915111|gb|EER88255.1| hypothetical protein
            SORBIDRAFT_10g010620 [Sorghum bicolor]
          Length = 981

 Score =  141 bits (355), Expect = 5e-31
 Identities = 109/373 (29%), Positives = 176/373 (47%), Gaps = 13/373 (3%)
 Frame = +2

Query: 2    DANNGLFPLAVYICKSESTKTWCRFLEIISPKLS--QHPLTLTIISDKQKGLVEAVSYVF 175
            DANN ++P+A      E+  TW  FL ++   L+         +ISD+QKGL++AV  + 
Sbjct: 507  DANNQMYPVAWAAVPIENYDTWYWFLSLLQKDLNICNGGEEWVLISDQQKGLLKAVQELV 566

Query: 176  DDTRSHRICFRHMYKNFKKLFKGAILRK--WHGLRPSLTRKWTLKSGWTR*DLRRKKQEN 349
             +   HR+C RH+Y N++K +    L+K  W   + S    + +   +   +     Q+ 
Sbjct: 567  PNAE-HRMCARHIYANWRKKYTDKKLQKKWWRCAKASSRTLFNMYRAYLAQETPEGAQDM 625

Query: 350  -GSRRKRWNHGDGLVLITHQSVSI*LIIFQSFNNWI*EVRDKPVCNLVDKLHLAFMRNIY 526
              +  + W+       I     S+   I +SFNN I E R  PV ++ + +    M  I 
Sbjct: 626  MKTSPEHWSRA--FFRIGSNCDSVDNNICESFNNSIMEARFYPVISMCEHIRKKLMVRIQ 683

Query: 527  DRKQKAKKWDDEVDNKFRGLVPKVKQTSKTRIKFI-RNYVVEGAENHCFSVKTAYDTRWI 703
            + + +A  W   +        P V +  K  I++  R YV+   E+  F V+   D ++I
Sbjct: 684  ENRARAANWTGTI-------CPNVFKKLKMNIEWSGRCYVLWNGEDG-FEVQEREDRKYI 735

Query: 704  VDLRSKECSCVVWQQFGVPCLHAVAVIYPKRCSWVDFCSHFFTVQAYKQTYAGYIKPMND 883
            V+L++KEC+C  WQ  G+PC HA++ IY       DF +  ++ +AY  TY   ++P+  
Sbjct: 736  VNLQNKECTCRYWQLSGLPCCHAISCIYKASLKLDDFIAPCYSKEAYMMTYQHVLQPVQG 795

Query: 884  MADWSTEIHVIEGVLQIINPPPHVRGIGRPKKQ--REEDEDAPSSK-----KKRTWKSCH 1042
              +W T        +    PP  V+  GRPK Q  RE+ E+   +K      K T + C 
Sbjct: 796  PENWPT------SDMPRPLPPAFVKMPGRPKTQRRREQGEEPKGTKLSKVGTKMTCRLCG 849

Query: 1043 LPDHNSRTCKGLP 1081
              DHNSR C   P
Sbjct: 850  KQDHNSRRCPKNP 862


>ref|XP_002467291.1| hypothetical protein SORBIDRAFT_01g023040 [Sorghum bicolor]
            gi|241921145|gb|EER94289.1| hypothetical protein
            SORBIDRAFT_01g023040 [Sorghum bicolor]
          Length = 934

 Score =  138 bits (348), Expect = 3e-30
 Identities = 110/381 (28%), Positives = 184/381 (48%), Gaps = 21/381 (5%)
 Frame = +2

Query: 2    DANNGLFPLAVYICKSESTKTWCRFLEIISPKLSQHP--LTLTIISDKQKGLVEAVSYVF 175
            DANN ++P+A      E+  +W  FL ++   L+ +   L   +ISD+QKGL++AV  + 
Sbjct: 471  DANNQIYPIAWAAVPIENYDSWYWFLSLLQKDLNINNGGLQWVVISDQQKGLLKAVKELI 530

Query: 176  DDTRSHRICFRHMYKNFKKLFKGAILRK--WHGLRPSLTRKWTLKSGWTR*D-------L 328
                 HR+C RH+Y N++K +    L+K  W   + S    + +   +   D       +
Sbjct: 531  P-AAEHRMCARHIYANWRKKYTDKKLQKKWWRCAKASNKVLFNVYRAYLAQDTPEGAADM 589

Query: 329  RRKKQENGSRR--KRWNHGDGLVLITHQSVSI*LIIFQSFNNWI*EVRDKPVCNLVDKLH 502
                 E+ SR   +R N+ D          S+   + +SFN+ I E R  PV ++ + + 
Sbjct: 590  MATSPEHWSRAYFRRGNNCD----------SVDNNMCESFNHSIMEARFYPVISMCEAIR 639

Query: 503  LAFMRNIYDRKQKAKKWDDEV-DNKFRGLVPKVKQTSKTRIKFIRNYVVEGAENHCFSVK 679
               M  I + + +A KW   +  N F+ L   ++ + K  + +       GA+   + V+
Sbjct: 640  KKLMVRIQENRARADKWTGNICPNVFKKLKMNIELSGKCIVLW------NGADG--YEVQ 691

Query: 680  TAYDTRWIVDLRSKECSCVVWQQFGVPCLHAVAVIYPKRCSWVDFCSHFFTVQAYKQTYA 859
               D ++IV L ++ECSC  WQ  G+PC HA++ IY    +  D+ +  F+ +AY +TY 
Sbjct: 692  DWEDRKYIVKLLTRECSCEYWQLSGLPCCHAISSIYKGHQNLEDYIASCFSKEAYMRTYD 751

Query: 860  GYIKPMNDMADWSTEIHVIEGVLQIINPPPHVRGIGRPKKQREEDE-DAPSSKK------ 1018
              + P+   A+W      I  + + + PP +V+  GRPK QR+ +E + P   K      
Sbjct: 752  HVLMPVEGAANWP-----ISDMPRPL-PPAYVKMPGRPKTQRKREEWEQPKGVKLSKVGI 805

Query: 1019 KRTWKSCHLPDHNSRTCKGLP 1081
            K T + C   DHNSR C   P
Sbjct: 806  KMTCRLCGKGDHNSRRCPKNP 826


>ref|XP_002269076.1| PREDICTED: uncharacterized protein LOC100253276 isoform 1 [Vitis
            vinifera] gi|359475510|ref|XP_003631693.1| PREDICTED:
            uncharacterized protein LOC100253276 isoform 2 [Vitis
            vinifera] gi|147838852|emb|CAN72363.1| hypothetical
            protein VITISV_011058 [Vitis vinifera]
          Length = 583

 Score =  133 bits (334), Expect = 1e-28
 Identities = 102/368 (27%), Positives = 161/368 (43%), Gaps = 11/368 (2%)
 Frame = +2

Query: 2    DANNGLFPLAVYICKSESTKTWCRFLEIISPKL---SQHPLTLTIISDKQKGLVEAVSYV 172
            DA+ GLFPLA  +  +E+ ++W  FL  +   L   +++   LT +SD QKG+ +AV   
Sbjct: 223  DADGGLFPLAFGVVDAENDESWMWFLSELRKALEMNTENVPQLTFLSDGQKGIQDAVKRK 282

Query: 173  FDDTRSHRICFRHMYKNFKKLFKGAILRK--WHGLRPSLTRKWTLKSGWTR*DLRRKKQE 346
            F  T SH  C RH+ ++  K FK + L    W     + T  +  K          + +E
Sbjct: 283  FP-TSSHAFCMRHLSESIGKEFKNSRLVHLLWKAAYATTTIAFKEKMA--------EIEE 333

Query: 347  NGSRRKRW-----NHGDGLVLITHQSVSI*LIIFQSFNNWI*EVRDKPVCNLVDKLHLAF 511
              S   +W          LV              + FN WI E R+ P+  +++++H   
Sbjct: 334  VSSEAAKWIQQFPTSRWALVYFEGTRYGHLSSNIEEFNKWILEARELPIIQVIEQIHSKL 393

Query: 512  MRNIYDRKQKAKKWDDEVDNKFRGLVPKVKQTSKTRIKFIRNYVVEGAENHCFSVKTAYD 691
            M    +R+ K+  W       F  L P   +     I     Y V  ++   F V +A +
Sbjct: 394  MAEFEERRLKSNSW-------FSVLAPSADKRMMEAIGRASTYQVLRSDEVEFEVLSA-E 445

Query: 692  TRWIVDLRSKECSCVVWQQFGVPCLHAVAVIYPKRCSWVDFCSHFFTVQAYKQTYAGYIK 871
               IV++ ++ CSC  WQ +G+PC HAVA +   R     F    FTV +Y+  Y+  I+
Sbjct: 446  RSDIVNIGTQCCSCRDWQLYGIPCSHAVAALLSCRKDVYAFTEKCFTVASYRAAYSEEIR 505

Query: 872  PMNDMADWSTEIHV-IEGVLQIINPPPHVRGIGRPKKQREEDEDAPSSKKKRTWKSCHLP 1048
            P+    +W   +   ++    ++ PP   R  GRP+K+R   ED    K       C+  
Sbjct: 506  PIPCKIEWRRTVEAPVDDDTPVVRPPKFRRPPGRPEKKRICVEDLNREKHTVHCSRCNQT 565

Query: 1049 DHNSRTCK 1072
             H   TCK
Sbjct: 566  GHYKTTCK 573