BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024223
         (719 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containi...   314   1e-83
ref|XP_002527150.1| pentatricopeptide repeat-containing protein,...   300   2e-79
ref|XP_002328265.1| predicted protein [Populus trichocarpa] gi|2...   287   2e-75
ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. l...   277   2e-72
ref|NP_179305.2| pentatricopeptide repeat-containing protein [Ar...   275   5e-72

>ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
           [Vitis vinifera] gi|297744485|emb|CBI37747.3| unnamed
           protein product [Vitis vinifera]
          Length = 878

 Score =  314 bits (804), Expect = 1e-83
 Identities = 157/239 (65%), Positives = 190/239 (79%)
 Frame = -3

Query: 717 LYNVLLESSFKENRLDCVSRLYKDMLLARVLPETYTFNLMISFFTESGRLEDATNLFDKM 538
           LYN++LESS +E+++D  S LYKDM++A V PETYT NL+I+   +SGR EDA  +FDKM
Sbjct: 118 LYNMVLESSLREDKVDSFSWLYKDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREVFDKM 177

Query: 537 PVKGCRPNVFSFGILIKGYCNAGLGSEALEVFNKMGSFGCEPNMVIFNTLISCFCKEGNV 358
            VKGCRPN FSFGIL++GYC AGL   ALE+ + MGSFG +PN VI+NTLIS FC+EG  
Sbjct: 178 GVKGCRPNEFSFGILVRGYCRAGLSMRALELLDGMGSFGVQPNKVIYNTLISSFCREGRN 237

Query: 357 GVAEMLVEKMRENGLSPNVVTFNCRISALCSVGKVLEGYRIFSDMQMKDDDLGLPRPNLI 178
             AE LVE+MRE+GL P+VVTFN RISALCS GK+LE  RIF DMQ+ D++LGLPRPN+ 
Sbjct: 238 EEAERLVERMREDGLFPDVVTFNSRISALCSAGKILEASRIFRDMQI-DEELGLPRPNIT 296

Query: 177 TFNIMLEGFCKERMLEEAEVLVESMKEDGMFTTLESYNTWLLGLVRNENLLKARSVLQE 1
           TFN+MLEGFCKE MLEEA+ LVESMK +G    LESYN WLLGLVRN  LL+A+  L+E
Sbjct: 297 TFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLALKE 355



 Score =  107 bits (267), Expect = 2e-21
 Identities = 76/277 (27%), Positives = 127/277 (45%), Gaps = 39/277 (14%)
 Frame = -3

Query: 717  LYNVLLESSFKENRLDCVSRLYKDMLLARVLPETYTFNLMISFFTESGRLEDATNLFDKM 538
            +YN L+ S  +E R +   RL + M    + P+  TFN  IS    +G++ +A+ +F  M
Sbjct: 223  IYNTLISSFCREGRNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKILEASRIFRDM 282

Query: 537  PVKG----CRPNVFSFGILIKGYCNAGLGSEA---------------LEVFN-------- 439
             +       RPN+ +F ++++G+C  G+  EA               LE +N        
Sbjct: 283  QIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVR 342

Query: 438  ------------KMGSFGCEPNMVIFNTLISCFCKEGNVGVAEMLVEKMRENGLSPNVVT 295
                        +M   G EPN+  FNT++   CK G +  A M++  M  +G+ P+ VT
Sbjct: 343  NGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVT 402

Query: 294  FNCRISALCSVGKVLEGYRIFSDMQMKDDDLGLPRPNLITFNIMLEGFCKERMLEEAEVL 115
            ++  +   CS GKVL+   I  +M  +        PN  T NI+L    KE  + EAE L
Sbjct: 403  YSTLLHGCCSTGKVLKANNILHEMMRRGCS-----PNTYTCNILLHSLWKEGRIFEAEKL 457

Query: 114  VESMKEDGMFTTLESYNTWLLGLVRNENLLKARSVLQ 4
            ++ M E        + N  + GL ++  L +A  +++
Sbjct: 458  LQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVE 494



 Score =  106 bits (265), Expect = 4e-21
 Identities = 68/224 (30%), Positives = 110/224 (49%)
 Frame = -3

Query: 714 YNVLLESSFKENRLDCVSRLYKDMLLARVLPETYTFNLMISFFTESGRLEDATNLFDKMP 535
           +N++LE   KE  L+    L + M     L E  ++N+ +     +G+L +A     +M 
Sbjct: 298 FNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLALKEMV 357

Query: 534 VKGCRPNVFSFGILIKGYCNAGLGSEALEVFNKMGSFGCEPNMVIFNTLISCFCKEGNVG 355
            KG  PN++SF  ++ G C  GL S+A  +   M S G  P+ V ++TL+   C  G V 
Sbjct: 358 DKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGKVL 417

Query: 354 VAEMLVEKMRENGLSPNVVTFNCRISALCSVGKVLEGYRIFSDMQMKDDDLGLPRPNLIT 175
            A  ++ +M   G SPN  T N  + +L   G++ E  ++   M  +  DL     + +T
Sbjct: 418 KANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDL-----DNVT 472

Query: 174 FNIMLEGFCKERMLEEAEVLVESMKEDGMFTTLESYNTWLLGLV 43
            NI+++G CK   L+EA  +VE M   G    L +     +GLV
Sbjct: 473 CNIVIDGLCKSGKLDEAVEIVEGMWIHGS-AALGNLGNSFIGLV 515



 Score = 99.4 bits (246), Expect = 7e-19
 Identities = 63/238 (26%), Positives = 116/238 (48%), Gaps = 23/238 (9%)
 Frame = -3

Query: 711  NVLLESSFKENRLDCVSRLYKDMLLARVLPETYTFNLMISFFTESGRLEDATNLFDKMPV 532
            N+LL S +KE R+    +L + M       +  T N++I    +SG+L++A  + + M +
Sbjct: 439  NILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWI 498

Query: 531  KG-----------------------CRPNVFSFGILIKGYCNAGLGSEALEVFNKMGSFG 421
             G                       C P++ ++ I+I G C AG   EA + F +M    
Sbjct: 499  HGSAALGNLGNSFIGLVDSSSNGKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKS 558

Query: 420  CEPNMVIFNTLISCFCKEGNVGVAEMLVEKMRENGLSPNVVTFNCRISALCSVGKVLEGY 241
              P+ +I++T I  FCK G +  A  +++ M + G + ++ T+N  I  L S  ++ E Y
Sbjct: 559  LHPDSIIYDTFIHSFCKHGKISSAFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIY 618

Query: 240  RIFSDMQMKDDDLGLPRPNLITFNIMLEGFCKERMLEEAEVLVESMKEDGMFTTLESY 67
             +  DM+ K    G+  PN+ T+N M+   C+   +++A  L++ M + G+   + S+
Sbjct: 619  GLLDDMKEK----GI-TPNICTYNNMISCLCEGGRIKDATSLLDEMLQKGISPNISSF 671



 Score = 92.0 bits (227), Expect = 1e-16
 Identities = 70/291 (24%), Positives = 121/291 (41%), Gaps = 53/291 (18%)
 Frame = -3

Query: 714  YNVLLESSFKENRLDCVSRLYKDMLLARVLPETYTFNLMISFFTESGRLEDATNLFDKMP 535
            YN+ L    +  +L       K+M+   + P  Y+FN ++    ++G + DA  +   M 
Sbjct: 333  YNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMI 392

Query: 534  VKGCRPNVFSFGILIKGYCNAGLGSEALEVFNKMGSFGCEPNMVIFNTLISCFCKEGNVG 355
              G  P+  ++  L+ G C+ G   +A  + ++M   GC PN    N L+    KEG + 
Sbjct: 393  SSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIF 452

Query: 354  VAEMLVEKMRENGLSPNVVTFNCRISALCSVGKVLEGYRIFSDM---------QMKDDDL 202
             AE L++KM E     + VT N  I  LC  GK+ E   I   M          + +  +
Sbjct: 453  EAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFI 512

Query: 201  GLPR---------PNLITFNIMLEGFCKERMLEEAEV----------------------- 118
            GL           P+LIT++I++ G CK   L+EA                         
Sbjct: 513  GLVDSSSNGKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHS 572

Query: 117  ------------LVESMKEDGMFTTLESYNTWLLGLVRNENLLKARSVLQE 1
                        +++ M++ G   +L++YN+ +LGL     + +   +L +
Sbjct: 573  FCKHGKISSAFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDD 623



 Score = 88.6 bits (218), Expect = 1e-15
 Identities = 46/163 (28%), Positives = 86/163 (52%)
 Frame = -3

Query: 633 RVLPETYTFNLMISFFTESGRLEDATNLFDKMPVKGCRPNVFSFGILIKGYCNAGLGSEA 454
           + LP+  T++++I+   ++GRL++A   F +M  K   P+   +   I  +C  G  S A
Sbjct: 523 KCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSA 582

Query: 453 LEVFNKMGSFGCEPNMVIFNTLISCFCKEGNVGVAEMLVEKMRENGLSPNVVTFNCRISA 274
             V   M   GC  ++  +N+LI     +  +     L++ M+E G++PN+ T+N  IS 
Sbjct: 583 FRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMISC 642

Query: 273 LCSVGKVLEGYRIFSDMQMKDDDLGLPRPNLITFNIMLEGFCK 145
           LC  G++ +   +  +M  K    G+  PN+ +F ++++ FCK
Sbjct: 643 LCEGGRIKDATSLLDEMLQK----GI-SPNISSFRLLIKAFCK 680



 Score = 86.3 bits (212), Expect = 6e-15
 Identities = 60/261 (22%), Positives = 114/261 (43%), Gaps = 23/261 (8%)
 Frame = -3

Query: 714  YNVLLESSFKENRLDCVSRLYKDMLLARVLPETYTFNLMISFFTESGRLEDATNLFDKMP 535
            Y+ LL       ++   + +  +M+     P TYT N+++    + GR+ +A  L  KM 
Sbjct: 403  YSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMN 462

Query: 534  VKGCRPNVFSFGILIKGYCNAGLGSEALEVFNKM--------GSFG-------------- 421
             +    +  +  I+I G C +G   EA+E+   M        G+ G              
Sbjct: 463  ERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVDSSSNGK 522

Query: 420  -CEPNMVIFNTLISCFCKEGNVGVAEMLVEKMRENGLSPNVVTFNCRISALCSVGKVLEG 244
             C P+++ ++ +I+  CK G +  A     +M    L P+ + ++  I + C  GK+   
Sbjct: 523  KCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSA 582

Query: 243  YRIFSDMQMKDDDLGLPRPNLITFNIMLEGFCKERMLEEAEVLVESMKEDGMFTTLESYN 64
            +R+  DM+ +  +  L      T+N ++ G   +  + E   L++ MKE G+   + +YN
Sbjct: 583  FRVLKDMEKRGCNKSLQ-----TYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYN 637

Query: 63   TWLLGLVRNENLLKARSVLQE 1
              +  L     +  A S+L E
Sbjct: 638  NMISCLCEGGRIKDATSLLDE 658



 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 56/242 (23%), Positives = 103/242 (42%), Gaps = 34/242 (14%)
 Frame = -3

Query: 714  YNVLLESSFKENRLDCVSRLYKDMLLARVLPETYTFNLMISFFTESGRLEDATNLFDKMP 535
            Y++++    K  RLD   + + +M+   + P++  ++  I  F + G++  A  +   M 
Sbjct: 531  YSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRVLKDME 590

Query: 534  VKGCRPNVFSFGILIKGYCNAGLGSEALEVFNKMGSFGCEPNMVIFNTLISCFCKEGNVG 355
             +GC  ++ ++  LI G  +     E   + + M   G  PN+  +N +ISC C+ G + 
Sbjct: 591  KRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMISCLCEGGRIK 650

Query: 354  VAEMLVEKMRENGLSPNVVTFNCRISALCSV----------------------------- 262
             A  L+++M + G+SPN+ +F   I A C                               
Sbjct: 651  DATSLLDEMLQKGISPNISSFRLLIKAFCKASDFGVVKEVFEIALSICGHKEALYSLMFN 710

Query: 261  -----GKVLEGYRIFSDMQMKDDDLGLPRPNLITFNIMLEGFCKERMLEEAEVLVESMKE 97
                 G+V E   +F     +  DLG        +N ++E  CK+ MLE A  ++  M +
Sbjct: 711  ELLIGGEVSEAKELFDAALDRCFDLG-----NFQYNDLIEKLCKDEMLENASDILHKMID 765

Query: 96   DG 91
             G
Sbjct: 766  KG 767


>ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223533489|gb|EEF35232.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 874

 Score =  300 bits (768), Expect = 2e-79
 Identities = 149/239 (62%), Positives = 183/239 (76%)
 Frame = -3

Query: 717 LYNVLLESSFKENRLDCVSRLYKDMLLARVLPETYTFNLMISFFTESGRLEDATNLFDKM 538
           LYNVLL+S  +ENR++ VS LYKDM+LARV PE YTFNL+I    +SG LEDA  LFDKM
Sbjct: 114 LYNVLLKSCIRENRVELVSWLYKDMVLARVSPEAYTFNLLIGLLCDSGHLEDARELFDKM 173

Query: 537 PVKGCRPNVFSFGILIKGYCNAGLGSEALEVFNKMGSFGCEPNMVIFNTLISCFCKEGNV 358
           P +GC PN F+FGIL++GYC AGL S+ LE+  +M + G  PN V++NTLIS FCKEG  
Sbjct: 174 PARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNTLISSFCKEGKT 233

Query: 357 GVAEMLVEKMRENGLSPNVVTFNCRISALCSVGKVLEGYRIFSDMQMKDDDLGLPRPNLI 178
             AE LV+KMRE+GL P+V TFN RISALC  GK+LE  RIF DMQ+ D++LGLP PN+I
Sbjct: 234 HDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQI-DEELGLPHPNVI 292

Query: 177 TFNIMLEGFCKERMLEEAEVLVESMKEDGMFTTLESYNTWLLGLVRNENLLKARSVLQE 1
           T+ +ML GFCKE MLEEA+ LV++MK +  F  LESYN WLLGL+RN  LL+A  VL+E
Sbjct: 293 TYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIVLKE 351



 Score =  107 bits (268), Expect = 2e-21
 Identities = 70/256 (27%), Positives = 122/256 (47%), Gaps = 18/256 (7%)
 Frame = -3

Query: 714  YNVLLESSFKENRLDCVSRLYKDMLLARVLPETYTFNLMISFFTESGRLEDATNLFDKMP 535
            YN+ L    +  +L     + K+ML   + P+ Y++N+++    ++G L DA  L   M 
Sbjct: 329  YNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMI 388

Query: 534  VKGCRPNVFSFGILIKGYCNAGLGSEALEVFNKMGSFGCEPNMVIFNTLISCFCKEGNVG 355
              G  P+  ++  L+ GYC+ G   EA  + ++M S  C PN    N L+    KEG + 
Sbjct: 389  RNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRIS 448

Query: 354  VAEMLVEKMRENGLSPNVVTFNCRISALCSVGKVLEGYRIFSDM---------------- 223
             AE L++KM E G   + VT N  I+ALC+ G++ +   I + M                
Sbjct: 449  EAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFI 508

Query: 222  QMKDDDLGLPR--PNLITFNIMLEGFCKERMLEEAEVLVESMKEDGMFTTLESYNTWLLG 49
             + DD +   +  P+L+T++ ++ G CK   L++A+     M   G+      Y+T++  
Sbjct: 509  GLVDDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHS 568

Query: 48   LVRNENLLKARSVLQE 1
              R   +  A  VL++
Sbjct: 569  FCREGKISSAFQVLKD 584



 Score =  102 bits (255), Expect = 6e-20
 Identities = 69/223 (30%), Positives = 105/223 (47%), Gaps = 4/223 (1%)
 Frame = -3

Query: 663 SRLYKDMLLARVL----PETYTFNLMISFFTESGRLEDATNLFDKMPVKGCRPNVFSFGI 496
           SR+++DM +   L    P   T+ LM+  F + G LE+A  L D M       N+ S+ I
Sbjct: 272 SRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNI 331

Query: 495 LIKGYCNAGLGSEALEVFNKMGSFGCEPNMVIFNTLISCFCKEGNVGVAEMLVEKMRENG 316
            + G    G   EA  V  +M   G EP++  +N ++   CK G +  A ML+  M  NG
Sbjct: 332 WLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNG 391

Query: 315 LSPNVVTFNCRISALCSVGKVLEGYRIFSDMQMKDDDLGLPRPNLITFNIMLEGFCKERM 136
           + P+ VT++  +   CS GKV E   +  +M   +       PN  T N++L    KE  
Sbjct: 392 ILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCS-----PNTYTCNVLLHSLWKEGR 446

Query: 135 LEEAEVLVESMKEDGMFTTLESYNTWLLGLVRNENLLKARSVL 7
           + EAE L++ M E G      + N  +  L  N  L KA  ++
Sbjct: 447 ISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIV 489



 Score =  102 bits (253), Expect = 1e-19
 Identities = 67/261 (25%), Positives = 118/261 (45%), Gaps = 23/261 (8%)
 Frame = -3

Query: 714  YNVLLESSFKENRLDCVSRLYKDMLLARVLPETYTFNLMISFFTESGRLEDATNLFDKMP 535
            Y+ LL     + ++   + L  +M+     P TYT N+++    + GR+ +A NL  KM 
Sbjct: 399  YSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMN 458

Query: 534  VKGCRPNVFSFGILIKGYCNAGLGSEALEVFNKMGSFG---------------------- 421
             KG   +  +  I+I   CN G   +A+E+ N M + G                      
Sbjct: 459  EKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGK 518

Query: 420  -CEPNMVIFNTLISCFCKEGNVGVAEMLVEKMRENGLSPNVVTFNCRISALCSVGKVLEG 244
             C P++V ++T+IS  CK G +  A+    +M   GL P+   ++  I + C  GK+   
Sbjct: 519  KCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSA 578

Query: 243  YRIFSDMQMKDDDLGLPRPNLITFNIMLEGFCKERMLEEAEVLVESMKEDGMFTTLESYN 64
            +++  DM+ +  +       L T+N ++ G   +  + E   L++ M+E G+   + +YN
Sbjct: 579  FQVLKDMEKRGCN-----KTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYN 633

Query: 63   TWLLGLVRNENLLKARSVLQE 1
              L  L     +  A SVL E
Sbjct: 634  HMLNCLCEGGRINDAPSVLDE 654



 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 61/238 (25%), Positives = 112/238 (47%), Gaps = 23/238 (9%)
 Frame = -3

Query: 711  NVLLESSFKENRLDCVSRLYKDMLLARVLPETYTFNLMISFFTESGRLEDATNLFDKMPV 532
            NVLL S +KE R+     L + M       +T T N++I+    +G+L+ A  + + M  
Sbjct: 435  NVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWT 494

Query: 531  KG-----------------------CRPNVFSFGILIKGYCNAGLGSEALEVFNKMGSFG 421
             G                       C P++ ++  +I G C AG   +A + F +M S G
Sbjct: 495  HGSAALGNLGNSFIGLVDDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKG 554

Query: 420  CEPNMVIFNTLISCFCKEGNVGVAEMLVEKMRENGLSPNVVTFNCRISALCSVGKVLEGY 241
             +P+  I++T I  FC+EG +  A  +++ M + G +  + T+N  I  L S  ++ E Y
Sbjct: 555  LQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELY 614

Query: 240  RIFSDMQMKDDDLGLPRPNLITFNIMLEGFCKERMLEEAEVLVESMKEDGMFTTLESY 67
             +  +M+ K        P++ T+N ML   C+   + +A  +++ M + G+   + S+
Sbjct: 615  GLIDEMREKG-----VSPDVCTYNHMLNCLCEGGRINDAPSVLDEMLQKGISPNISSF 667



 Score = 91.7 bits (226), Expect = 1e-16
 Identities = 49/160 (30%), Positives = 86/160 (53%)
 Frame = -3

Query: 624 PETYTFNLMISFFTESGRLEDATNLFDKMPVKGCRPNVFSFGILIKGYCNAGLGSEALEV 445
           P+  T++ +IS   ++GRL+DA   F +M  KG +P+   +   I  +C  G  S A +V
Sbjct: 522 PDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQV 581

Query: 444 FNKMGSFGCEPNMVIFNTLISCFCKEGNVGVAEMLVEKMRENGLSPNVVTFNCRISALCS 265
              M   GC   +  +N+LI     +  +     L+++MRE G+SP+V T+N  ++ LC 
Sbjct: 582 LKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCE 641

Query: 264 VGKVLEGYRIFSDMQMKDDDLGLPRPNLITFNIMLEGFCK 145
            G++ +   +  +M  K    G+  PN+ +F I+++ FCK
Sbjct: 642 GGRINDAPSVLDEMLQK----GI-SPNISSFRILIKAFCK 676



 Score = 75.9 bits (185), Expect = 8e-12
 Identities = 36/161 (22%), Positives = 77/161 (47%)
 Frame = -3

Query: 714  YNVLLESSFKENRLDCVSRLYKDMLLARVLPETYTFNLMISFFTESGRLEDATNLFDKMP 535
            Y+ ++    K  RLD   + + +M+   + P++  ++  I  F   G++  A  +   M 
Sbjct: 527  YSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDME 586

Query: 534  VKGCRPNVFSFGILIKGYCNAGLGSEALEVFNKMGSFGCEPNMVIFNTLISCFCKEGNVG 355
             +GC   + ++  LI G  +     E   + ++M   G  P++  +N +++C C+ G + 
Sbjct: 587  KRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEGGRIN 646

Query: 354  VAEMLVEKMRENGLSPNVVTFNCRISALCSVGKVLEGYRIF 232
             A  ++++M + G+SPN+ +F   I A C        + +F
Sbjct: 647  DAPSVLDEMLQKGISPNISSFRILIKAFCKACDFKASHEVF 687



 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 47/197 (23%), Positives = 86/197 (43%), Gaps = 32/197 (16%)
 Frame = -3

Query: 495 LIKGYCNAGLGSEALEVFNKMGSFGCE--PNMVIFNTLISCFCKEGNVGVAEMLVEKMRE 322
           L+     +G  ++A+  F  + S   E  P++ ++N L+    +E  V +   L + M  
Sbjct: 81  LVTVLAKSGFFNKAISHFKSLRSNFPEKQPSIYLYNVLLKSCIRENRVELVSWLYKDMVL 140

Query: 321 NGLSPNVVTFNCRISALCSVGKVLEGYRIFSDMQMKDDD--------------------- 205
             +SP   TFN  I  LC  G + +   +F  M  +  +                     
Sbjct: 141 ARVSPEAYTFNLLIGLLCDSGHLEDARELFDKMPARGCEPNEFTFGILVRGYCRAGLASK 200

Query: 204 ----LGLPR-----PNLITFNIMLEGFCKERMLEEAEVLVESMKEDGMFTTLESYNTWLL 52
               LG  R     PN + +N ++  FCKE    +AE LV+ M+EDG+   +E++N+ + 
Sbjct: 201 GLELLGQMRTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRIS 260

Query: 51  GLVRNENLLKARSVLQE 1
            L  +  +L+A  + ++
Sbjct: 261 ALCGSGKILEASRIFRD 277


>ref|XP_002328265.1| predicted protein [Populus trichocarpa] gi|222837780|gb|EEE76145.1|
           predicted protein [Populus trichocarpa]
          Length = 742

 Score =  287 bits (734), Expect = 2e-75
 Identities = 147/239 (61%), Positives = 176/239 (73%)
 Frame = -3

Query: 717 LYNVLLESSFKENRLDCVSRLYKDMLLARVLPETYTFNLMISFFTESGRLEDATNLFDKM 538
           LYNVLL S  KE R+DCVS L KDM+ + V PETYTFN++I    +SG L+DA  LFDKM
Sbjct: 23  LYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDARELFDKM 82

Query: 537 PVKGCRPNVFSFGILIKGYCNAGLGSEALEVFNKMGSFGCEPNMVIFNTLISCFCKEGNV 358
           P KGC PN +SFGIL++GYC AG  S+ LE+  +M   G  PN V++NTLIS FCKEG  
Sbjct: 83  PEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCKEGKT 142

Query: 357 GVAEMLVEKMRENGLSPNVVTFNCRISALCSVGKVLEGYRIFSDMQMKDDDLGLPRPNLI 178
             AE LV++MR++GLSP+VVTFN RISALCS GKVLE  RIF DMQ+ D+ LGLP+PN+I
Sbjct: 143 DDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQI-DEVLGLPQPNII 201

Query: 177 TFNIMLEGFCKERMLEEAEVLVESMKEDGMFTTLESYNTWLLGLVRNENLLKARSVLQE 1
           T+N+ML GFCKE MLEEA  L E MK        ESYN WLLGLVR   LL+A+ VL+E
Sbjct: 202 TYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVLKE 260



 Score =  112 bits (281), Expect = 6e-23
 Identities = 77/240 (32%), Positives = 116/240 (48%), Gaps = 4/240 (1%)
 Frame = -3

Query: 714 YNVLLESSFKENRLDCVSRLYKDMLLARVL----PETYTFNLMISFFTESGRLEDATNLF 547
           +N  + +     ++   SR+++DM +  VL    P   T+NLM+  F + G LE+A  LF
Sbjct: 164 FNARISALCSSGKVLEASRIFRDMQIDEVLGLPQPNIITYNLMLGGFCKEGMLEEARALF 223

Query: 546 DKMPVKGCRPNVFSFGILIKGYCNAGLGSEALEVFNKMGSFGCEPNMVIFNTLISCFCKE 367
           +KM V     N  S+ I + G    G   EA  V  +M   G EPN+  +N ++   CK 
Sbjct: 224 EKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKN 283

Query: 366 GNVGVAEMLVEKMRENGLSPNVVTFNCRISALCSVGKVLEGYRIFSDMQMKDDDLGLPRP 187
           G +  A ML+  M  +G+ P+ VT+   +   C  GKV E   +  +M M+D       P
Sbjct: 284 GVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREM-MRDG----CSP 338

Query: 186 NLITFNIMLEGFCKERMLEEAEVLVESMKEDGMFTTLESYNTWLLGLVRNENLLKARSVL 7
           N  T NI+L    KE  + EAE L++ M E G      + N  + GL  N  L KA  ++
Sbjct: 339 NNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIV 398



 Score = 98.6 bits (244), Expect = 1e-18
 Identities = 64/261 (24%), Positives = 122/261 (46%), Gaps = 23/261 (8%)
 Frame = -3

Query: 714  YNVLLESSFKENRLDCVSRLYKDMLLARVLPETYTFNLMISFFTESGRLEDATNLFDKMP 535
            YN++++   K   L     L + M  + VLP+T T+  ++  +  +G++ +A N+  +M 
Sbjct: 273  YNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMM 332

Query: 534  VKGCRPNVFSFGILIKGYCNAGLGSEALEVFNKMGSFGCEPNMVIFNTLISCFCKEGNVG 355
              GC PN ++  IL+      G  SEA E+  KM   G   + V  N +I   C  G + 
Sbjct: 333  RDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLD 392

Query: 354  VAEMLVEKMRENGLS-----------------------PNVVTFNCRISALCSVGKVLEG 244
             A  +V  M  +G +                       P++++++  IS LC  G+V E 
Sbjct: 393  KAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYSTIISGLCKAGRVGEA 452

Query: 243  YRIFSDMQMKDDDLGLPRPNLITFNIMLEGFCKERMLEEAEVLVESMKEDGMFTTLESYN 64
             + F +M  K+      +P+   +++ +  FCKE  +  A  +++ M++ G   TL++YN
Sbjct: 453  KKKFIEMMGKN-----LQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKGCNKTLQTYN 507

Query: 63   TWLLGLVRNENLLKARSVLQE 1
            + ++GL     + +   ++ E
Sbjct: 508  SLIMGLGSKNQIFEIYGLIDE 528



 Score = 89.0 bits (219), Expect = 9e-16
 Identities = 57/239 (23%), Positives = 110/239 (46%), Gaps = 23/239 (9%)
 Frame = -3

Query: 711  NVLLESSFKENRLDCVSRLYKDMLLARVLPETYTFNLMISFFTESGRLEDATNLFDKMPV 532
            N+LL S +KE R+     L + M     + +T T N++I     +G+L+ A  + + M  
Sbjct: 344  NILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWT 403

Query: 531  KG-----------------------CRPNVFSFGILIKGYCNAGLGSEALEVFNKMGSFG 421
             G                       C P++ S+  +I G C AG   EA + F +M    
Sbjct: 404  HGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKN 463

Query: 420  CEPNMVIFNTLISCFCKEGNVGVAEMLVEKMRENGLSPNVVTFNCRISALCSVGKVLEGY 241
             +P+  I++  I  FCKEG +  A  +++ M + G +  + T+N  I  L S  ++ E Y
Sbjct: 464  LQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIY 523

Query: 240  RIFSDMQMKDDDLGLPRPNLITFNIMLEGFCKERMLEEAEVLVESMKEDGMFTTLESYN 64
             +  +M+ +        P++  +N +L   C+   +++A  +++ M + G+   + S++
Sbjct: 524  GLIDEMRERG-----VSPDVSIYNNVLSSLCEGGRVKDAPSVLDEMLQKGISPNISSFS 577



 Score = 73.6 bits (179), Expect = 4e-11
 Identities = 52/272 (19%), Positives = 118/272 (43%), Gaps = 34/272 (12%)
 Frame = -3

Query: 714  YNVLLESSFKENRLDCVSRLYKDMLLARVLPETYTFNLMISFFTESGRLEDATNLFDKMP 535
            Y+ ++    K  R+    + + +M+   + P++  +++ I  F + G++  A  +   M 
Sbjct: 436  YSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDME 495

Query: 534  VKGCRPNVFSFGILIKGYCNAGLGSEALEVFNKMGSFGCEPNMVIFNTLISCFCKEGNVG 355
             KGC   + ++  LI G  +     E   + ++M   G  P++ I+N ++S  C+ G V 
Sbjct: 496  KKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVK 555

Query: 354  VAEMLVEKMRENGLSPNVVTFNCRISALCSV----------------------------- 262
             A  ++++M + G+SPN+ +F+  I A C                               
Sbjct: 556  DAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFEIALNVCGHKEALYSLTFN 615

Query: 261  -----GKVLEGYRIFSDMQMKDDDLGLPRPNLITFNIMLEGFCKERMLEEAEVLVESMKE 97
                 G+V++   +F     +  D+G    N + +  +++  CK+  L++A  ++  + +
Sbjct: 616  ELLVGGEVVKAKELFETALDRSFDVG----NFL-YKDLIDHLCKDEKLDDASGILHKLID 670

Query: 96   DGMFTTLESYNTWLLGLVRNENLLKARSVLQE 1
             G +    S+   + GL +  N  +A  + ++
Sbjct: 671  KGYWFDPASFMPVIDGLGKRGNKHEADELAEK 702



 Score = 60.1 bits (144), Expect = 4e-07
 Identities = 53/206 (25%), Positives = 89/206 (43%)
 Frame = -3

Query: 714  YNVLLESSFKENRLDCVSRLYKDMLLARVLPETYTFNLMISFFTESGRLEDATNLFDKMP 535
            YN L+     +N++  +  L  +M    V P+   +N ++S   E GR++DA ++ D+M 
Sbjct: 506  YNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVKDAPSVLDEML 565

Query: 534  VKGCRPNVFSFGILIKGYCNAGLGSEALEVFNKMGSFGCEPNMVIFNTLISCFCKEGNVG 355
             KG  PN+ SF ILIK +C A   S   E+F ++    C     +++   +     G V 
Sbjct: 566  QKGISPNISSFSILIKAFCKACDFSAVDEIF-EIALNVCGHKEALYSLTFNELLVGGEVV 624

Query: 354  VAEMLVEKMRENGLSPNVVTFNCRISALCSVGKVLEGYRIFSDMQMKDDDLGLPRPNLIT 175
             A+ L E   +         +   I  LC   K+ +   I   +  K         +  +
Sbjct: 625  KAKELFETALDRSFDVGNFLYKDLIDHLCKDEKLDDASGILHKLIDKGYWF-----DPAS 679

Query: 174  FNIMLEGFCKERMLEEAEVLVESMKE 97
            F  +++G  K     EA+ L E M E
Sbjct: 680  FMPVIDGLGKRGNKHEADELAEKMME 705


>ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 874

 Score =  277 bits (708), Expect = 2e-72
 Identities = 135/239 (56%), Positives = 180/239 (75%)
 Frame = -3

Query: 717 LYNVLLESSFKENRLDCVSRLYKDMLLARVLPETYTFNLMISFFTESGRLEDATNLFDKM 538
           LYNVLLES  +E R++ VS LYKDM+L  + PETYTFNL+I    +S  ++ A  LFD+M
Sbjct: 114 LYNVLLESCIRERRVEFVSWLYKDMVLCGISPETYTFNLLIRALCDSSCVDAARELFDEM 173

Query: 537 PVKGCRPNVFSFGILIKGYCNAGLGSEALEVFNKMGSFGCEPNMVIFNTLISCFCKEGNV 358
           P KGC+PN F+FGIL++GYC AGL  + LE+ N M SFG  PN V++NT++S FC+EG  
Sbjct: 174 PEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTIVSSFCREGRN 233

Query: 357 GVAEMLVEKMRENGLSPNVVTFNCRISALCSVGKVLEGYRIFSDMQMKDDDLGLPRPNLI 178
             +E LVEKMRE GL P++VTFN RISALC  GKVL+  RIFSDM++ D+ LGLPRPN I
Sbjct: 234 DDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMEL-DEYLGLPRPNSI 292

Query: 177 TFNIMLEGFCKERMLEEAEVLVESMKEDGMFTTLESYNTWLLGLVRNENLLKARSVLQE 1
           T+N+ML+GFCK  +LE+A+ L ES++E+    +L+SYN WL GLVR+   ++A +VL++
Sbjct: 293 TYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQ 351



 Score =  107 bits (266), Expect = 3e-21
 Identities = 75/241 (31%), Positives = 120/241 (49%), Gaps = 4/241 (1%)
 Frame = -3

Query: 714 YNVLLESSFKENRLDCVSRLYKDMLLARVL----PETYTFNLMISFFTESGRLEDATNLF 547
           +N  + +  KE ++   SR++ DM L   L    P + T+NLM+  F + G LEDA  LF
Sbjct: 255 FNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLF 314

Query: 546 DKMPVKGCRPNVFSFGILIKGYCNAGLGSEALEVFNKMGSFGCEPNMVIFNTLISCFCKE 367
           + +       ++ S+ I ++G    G   EA  V  +M   G  P++  +N L+   CK 
Sbjct: 315 ESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKL 374

Query: 366 GNVGVAEMLVEKMRENGLSPNVVTFNCRISALCSVGKVLEGYRIFSDMQMKDDDLGLPRP 187
           G +  A+ +V  M+ NG+SP+ VT+ C +   CSVGKV     +  +M M+++ L    P
Sbjct: 375 GMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEM-MRNNCL----P 429

Query: 186 NLITFNIMLEGFCKERMLEEAEVLVESMKEDGMFTTLESYNTWLLGLVRNENLLKARSVL 7
           N  T NI+L        + EAE L+  M E G      + N  + GL  +  L KA  ++
Sbjct: 430 NAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIV 489

Query: 6   Q 4
           +
Sbjct: 490 K 490



 Score = 99.0 bits (245), Expect = 9e-19
 Identities = 65/261 (24%), Positives = 116/261 (44%), Gaps = 23/261 (8%)
 Frame = -3

Query: 714  YNVLLESSFKENRLDCVSRLYKDMLLARVLPETYTFNLMISFFTESGRLEDATNLFDKMP 535
            Y  LL       ++D    L ++M+    LP  YT N+++      GR+ +A  L  KM 
Sbjct: 399  YGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMN 458

Query: 534  VKGCRPNVFSFGILIKGYCNAGLGSEALEVFNKM--------GSFG-------------- 421
             KG   +  +  I++ G C +G   +A+E+   M        G+ G              
Sbjct: 459  EKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIEN 518

Query: 420  -CEPNMVIFNTLISCFCKEGNVGVAEMLVEKMRENGLSPNVVTFNCRISALCSVGKVLEG 244
             C P+++ ++TL++  CK G    A+ L  +M    L P+ + +N  I   C  GK+   
Sbjct: 519  NCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSA 578

Query: 243  YRIFSDMQMKDDDLGLPRPNLITFNIMLEGFCKERMLEEAEVLVESMKEDGMFTTLESYN 64
            +R+  DM+ K         +L T+N ++ G   +  + E   L++ M+E G+   + +YN
Sbjct: 579  FRVLKDMEKKGC-----HKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTYN 633

Query: 63   TWLLGLVRNENLLKARSVLQE 1
            T +  L     +  A ++L E
Sbjct: 634  TAIQYLCEGGKVEDATNLLDE 654



 Score = 97.8 bits (242), Expect = 2e-18
 Identities = 62/261 (23%), Positives = 118/261 (45%), Gaps = 23/261 (8%)
 Frame = -3

Query: 714  YNVLLESSFKENRLDCVSRLYKDMLLARVLPETYTFNLMISFFTESGRLEDATNLFDKMP 535
            YN+L++   K   L     +   M    V P+  T+  ++  +   G+++ A +L  +M 
Sbjct: 364  YNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMM 423

Query: 534  VKGCRPNVFSFGILIKGYCNAGLGSEALEVFNKMGSFGCEPNMVIFNTLISCFCKEGNVG 355
               C PN ++  IL+    N G  SEA E+  KM   G   + V  N ++   C  G + 
Sbjct: 424  RNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELD 483

Query: 354  VAEMLVEKMR-----------------------ENGLSPNVVTFNCRISALCSVGKVLEG 244
             A  +V+ MR                       EN   P+++T++  ++ LC  G+  E 
Sbjct: 484  KAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEA 543

Query: 243  YRIFSDMQMKDDDLGLPRPNLITFNIMLEGFCKERMLEEAEVLVESMKEDGMFTTLESYN 64
              +F++M  +       +P+ + +NI +  FCK+  +  A  +++ M++ G   +LE+YN
Sbjct: 544  KTLFAEMMGEK-----LQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYN 598

Query: 63   TWLLGLVRNENLLKARSVLQE 1
            + +LGL     + +   ++ E
Sbjct: 599  SLILGLGIKNQIFEIHGLMDE 619



 Score = 83.6 bits (205), Expect = 4e-14
 Identities = 70/299 (23%), Positives = 123/299 (41%), Gaps = 63/299 (21%)
 Frame = -3

Query: 711  NVLLESSFKENRLDCVSRLYKDMLLARVLPETYTFNLMISFFTESGRLEDATNLFDKMPV 532
            N+LL S +   R+     L + M       +T T N+++     SG L+ A  +   M V
Sbjct: 435  NILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRV 494

Query: 531  KG-----------------------CRPNVFSFGILIKGYCNAGLGSEALEVFNKMGSFG 421
             G                       C P++ ++  L+ G C AG  +EA  +F +M    
Sbjct: 495  HGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEK 554

Query: 420  CEPNMVIFNTLISCFCKEGNVGVA-----------------------------------E 346
             +P+ + +N  I  FCK+G +  A                                    
Sbjct: 555  LQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIH 614

Query: 345  MLVEKMRENGLSPNVVTFNCRISALCSVGKVLEGYRIFSDMQMKDDDLGLPRPNLITFNI 166
             L+++MRE G+SPN+ T+N  I  LC  GKV +   +  +M  K+       PN+ +F  
Sbjct: 615  GLMDEMREKGISPNICTYNTAIQYLCEGGKVEDATNLLDEMMQKN-----IAPNVFSFKY 669

Query: 165  MLEGFCKERMLEEAEVLVESM-----KEDGMFTTLESYNTWLLGLVRNENLLKARSVLQ 4
            ++  FCK    + A+ + E+      +++G+++ +  +N     L+    LLKA  +L+
Sbjct: 670  LIGAFCKVPDFDMAQEVFETAVSICGQKEGLYSLM--FNE----LLAAGQLLKATELLE 722



 Score = 65.9 bits (159), Expect = 8e-09
 Identities = 55/206 (26%), Positives = 88/206 (42%)
 Frame = -3

Query: 714  YNVLLESSFKENRLDCVSRLYKDMLLARVLPETYTFNLMISFFTESGRLEDATNLFDKMP 535
            YN L+     +N++  +  L  +M    + P   T+N  I +  E G++EDATNL D+M 
Sbjct: 597  YNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCEGGKVEDATNLLDEMM 656

Query: 534  VKGCRPNVFSFGILIKGYCNAGLGSEALEVFNKMGSFGCEPNMVIFNTLISCFCKEGNVG 355
             K   PNVFSF  LI  +C       A EVF    S  C     +++ + +     G + 
Sbjct: 657  QKNIAPNVFSFKYLIGAFCKVPDFDMAQEVFETAVSI-CGQKEGLYSLMFNELLAAGQLL 715

Query: 354  VAEMLVEKMRENGLSPNVVTFNCRISALCSVGKVLEGYRIFSDMQMKDDDLGLPRPNLIT 175
             A  L+E + + G       +   + +LC   ++     I    +M D   G     L+ 
Sbjct: 716  KATELLEAVLDRGFELGTFLYKDLVVSLCKKDELEVASGILH--KMIDKGYGFDPAALMP 773

Query: 174  FNIMLEGFCKERMLEEAEVLVESMKE 97
               +++G  K    +EA    E M E
Sbjct: 774  ---VIDGLGKMGNKKEANNFAEKMME 796



 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 46/213 (21%), Positives = 91/213 (42%), Gaps = 5/213 (2%)
 Frame = -3

Query: 714  YNVLLESSFKENRLDCVSRLYKDMLLARVLPETYTFNLMISFFTESGRLEDATNLFDKMP 535
            YN+ +    K+ ++    R+ KDM          T+N +I       ++ +   L D+M 
Sbjct: 562  YNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMR 621

Query: 534  VKGCRPNVFSFGILIKGYCNAGLGSEALEVFNKMGSFGCEPNMVIFNTLISCFCKEGNVG 355
             KG  PN+ ++   I+  C  G   +A  + ++M      PN+  F  LI  FCK  +  
Sbjct: 622  EKGISPNICTYNTAIQYLCEGGKVEDATNLLDEMMQKNIAPNVFSFKYLIGAFCKVPDFD 681

Query: 354  VAEMLVEKM-----RENGLSPNVVTFNCRISALCSVGKVLEGYRIFSDMQMKDDDLGLPR 190
            +A+ + E       ++ GL      ++   + L + G++L+   +   +  +  +LG   
Sbjct: 682  MAQEVFETAVSICGQKEGL------YSLMFNELLAAGQLLKATELLEAVLDRGFELG--- 732

Query: 189  PNLITFNIMLEGFCKERMLEEAEVLVESMKEDG 91
                 +  ++   CK+  LE A  ++  M + G
Sbjct: 733  --TFLYKDLVVSLCKKDELEVASGILHKMIDKG 763


>ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g17140 gi|110737729|dbj|BAF00803.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|330251496|gb|AEC06590.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 874

 Score =  275 bits (704), Expect = 5e-72
 Identities = 134/239 (56%), Positives = 180/239 (75%)
 Frame = -3

Query: 717 LYNVLLESSFKENRLDCVSRLYKDMLLARVLPETYTFNLMISFFTESGRLEDATNLFDKM 538
           LYN+LLES  KE R++ VS LYKDM+L  + P+TYTFNL+I    +S  ++ A  LFD+M
Sbjct: 114 LYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEM 173

Query: 537 PVKGCRPNVFSFGILIKGYCNAGLGSEALEVFNKMGSFGCEPNMVIFNTLISCFCKEGNV 358
           P KGC+PN F+FGIL++GYC AGL  + LE+ N M SFG  PN VI+NT++S FC+EG  
Sbjct: 174 PEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRN 233

Query: 357 GVAEMLVEKMRENGLSPNVVTFNCRISALCSVGKVLEGYRIFSDMQMKDDDLGLPRPNLI 178
             +E +VEKMRE GL P++VTFN RISALC  GKVL+  RIFSDM++ D+ LGLPRPN I
Sbjct: 234 DDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMEL-DEYLGLPRPNSI 292

Query: 177 TFNIMLEGFCKERMLEEAEVLVESMKEDGMFTTLESYNTWLLGLVRNENLLKARSVLQE 1
           T+N+ML+GFCK  +LE+A+ L ES++E+    +L+SYN WL GLVR+   ++A +VL++
Sbjct: 293 TYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQ 351



 Score =  108 bits (269), Expect = 1e-21
 Identities = 75/241 (31%), Positives = 120/241 (49%), Gaps = 4/241 (1%)
 Frame = -3

Query: 714 YNVLLESSFKENRLDCVSRLYKDMLLARVL----PETYTFNLMISFFTESGRLEDATNLF 547
           +N  + +  KE ++   SR++ DM L   L    P + T+NLM+  F + G LEDA  LF
Sbjct: 255 FNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLF 314

Query: 546 DKMPVKGCRPNVFSFGILIKGYCNAGLGSEALEVFNKMGSFGCEPNMVIFNTLISCFCKE 367
           + +       ++ S+ I ++G    G   EA  V  +M   G  P++  +N L+   CK 
Sbjct: 315 ESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKL 374

Query: 366 GNVGVAEMLVEKMRENGLSPNVVTFNCRISALCSVGKVLEGYRIFSDMQMKDDDLGLPRP 187
           G +  A+ +V  M+ NG+ P+ VT+ C +   CSVGKV     +  +M M+++ L    P
Sbjct: 375 GMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEM-MRNNCL----P 429

Query: 186 NLITFNIMLEGFCKERMLEEAEVLVESMKEDGMFTTLESYNTWLLGLVRNENLLKARSVL 7
           N  T NI+L    K   + EAE L+  M E G      + N  + GL  +  L KA  ++
Sbjct: 430 NAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIV 489

Query: 6   Q 4
           +
Sbjct: 490 K 490



 Score =  103 bits (258), Expect = 3e-20
 Identities = 68/261 (26%), Positives = 118/261 (45%), Gaps = 23/261 (8%)
 Frame = -3

Query: 714  YNVLLESSFKENRLDCVSRLYKDMLLARVLPETYTFNLMISFFTESGRLEDATNLFDKMP 535
            Y  LL       ++D    L ++M+    LP  YT N+++    + GR+ +A  L  KM 
Sbjct: 399  YGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMN 458

Query: 534  VKGCRPNVFSFGILIKGYCNAGLGSEALEVFNKM--------GSFG-------------- 421
             KG   +  +  I++ G C +G   +A+E+   M        G+ G              
Sbjct: 459  EKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIEN 518

Query: 420  -CEPNMVIFNTLISCFCKEGNVGVAEMLVEKMRENGLSPNVVTFNCRISALCSVGKVLEG 244
             C P+++ ++TL++  CK G    A+ L  +M    L P+ V +N  I   C  GK+   
Sbjct: 519  NCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSA 578

Query: 243  YRIFSDMQMKDDDLGLPRPNLITFNIMLEGFCKERMLEEAEVLVESMKEDGMFTTLESYN 64
            +R+  DM+ K         +L T+N ++ G   +  + E   L++ MKE G+   + +YN
Sbjct: 579  FRVLKDMEKKGC-----HKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYN 633

Query: 63   TWLLGLVRNENLLKARSVLQE 1
            T +  L   E +  A ++L E
Sbjct: 634  TAIQYLCEGEKVEDATNLLDE 654



 Score = 96.7 bits (239), Expect = 4e-18
 Identities = 61/261 (23%), Positives = 117/261 (44%), Gaps = 23/261 (8%)
 Frame = -3

Query: 714  YNVLLESSFKENRLDCVSRLYKDMLLARVLPETYTFNLMISFFTESGRLEDATNLFDKMP 535
            YN+L++   K   L     +   M    V P+  T+  ++  +   G+++ A +L  +M 
Sbjct: 364  YNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMM 423

Query: 534  VKGCRPNVFSFGILIKGYCNAGLGSEALEVFNKMGSFGCEPNMVIFNTLISCFCKEGNVG 355
               C PN ++  IL+      G  SEA E+  KM   G   + V  N ++   C  G + 
Sbjct: 424  RNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELD 483

Query: 354  VAEMLVEKMR-----------------------ENGLSPNVVTFNCRISALCSVGKVLEG 244
             A  +V+ MR                       EN   P+++T++  ++ LC  G+  E 
Sbjct: 484  KAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEA 543

Query: 243  YRIFSDMQMKDDDLGLPRPNLITFNIMLEGFCKERMLEEAEVLVESMKEDGMFTTLESYN 64
              +F++M  +       +P+ + +NI +  FCK+  +  A  +++ M++ G   +LE+YN
Sbjct: 544  KNLFAEMMGEK-----LQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYN 598

Query: 63   TWLLGLVRNENLLKARSVLQE 1
            + +LGL     + +   ++ E
Sbjct: 599  SLILGLGIKNQIFEIHGLMDE 619



 Score = 95.9 bits (237), Expect = 7e-18
 Identities = 66/256 (25%), Positives = 112/256 (43%), Gaps = 18/256 (7%)
 Frame = -3

Query: 714  YNVLLESSFKENRLDCVSRLYKDMLLARVLPETYTFNLMISFFTESGRLEDATNLFDKMP 535
            YN+ L+   +  +      + K M    + P  Y++N+++    + G L DA  +   M 
Sbjct: 329  YNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMK 388

Query: 534  VKGCRPNVFSFGILIKGYCNAGLGSEALEVFNKMGSFGCEPNMVIFNTLISCFCKEGNVG 355
              G  P+  ++G L+ GYC+ G    A  +  +M    C PN    N L+    K G + 
Sbjct: 389  RNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRIS 448

Query: 354  VAEMLVEKMRENGLSPNVVTFNCRISALCSVG------KVLEGYRIF----------SDM 223
             AE L+ KM E G   + VT N  +  LC  G      ++++G R+           S +
Sbjct: 449  EAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYI 508

Query: 222  QMKDDDL--GLPRPNLITFNIMLEGFCKERMLEEAEVLVESMKEDGMFTTLESYNTWLLG 49
             + DD L      P+LIT++ +L G CK     EA+ L   M  + +     +YN ++  
Sbjct: 509  GLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHH 568

Query: 48   LVRNENLLKARSVLQE 1
              +   +  A  VL++
Sbjct: 569  FCKQGKISSAFRVLKD 584



 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 71/299 (23%), Positives = 124/299 (41%), Gaps = 63/299 (21%)
 Frame = -3

Query: 711  NVLLESSFKENRLDCVSRLYKDMLLARVLPETYTFNLMISFFTESGRLEDATNLFDKMPV 532
            N+LL S +K  R+     L + M       +T T N+++     SG L+ A  +   M V
Sbjct: 435  NILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRV 494

Query: 531  KG-----------------------CRPNVFSFGILIKGYCNAGLGSEALEVFNKMGSFG 421
             G                       C P++ ++  L+ G C AG  +EA  +F +M    
Sbjct: 495  HGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEK 554

Query: 420  CEPNMVIFNTLISCFCKEGNVGVA-----------------------------------E 346
             +P+ V +N  I  FCK+G +  A                                    
Sbjct: 555  LQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIH 614

Query: 345  MLVEKMRENGLSPNVVTFNCRISALCSVGKVLEGYRIFSDMQMKDDDLGLPRPNLITFNI 166
             L+++M+E G+SPN+ T+N  I  LC   KV +   +  +M  K+       PN+ +F  
Sbjct: 615  GLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKN-----IAPNVFSFKY 669

Query: 165  MLEGFCKERMLEEAEVLVESM-----KEDGMFTTLESYNTWLLGLVRNENLLKARSVLQ 4
            ++E FCK    + A+ + E+      +++G+++ +  +N     L+    LLKA  +L+
Sbjct: 670  LIEAFCKVPDFDMAQEVFETAVSICGQKEGLYSLM--FNE----LLAAGQLLKATELLE 722



 Score = 63.9 bits (154), Expect = 3e-08
 Identities = 42/149 (28%), Positives = 68/149 (45%)
 Frame = -3

Query: 714  YNVLLESSFKENRLDCVSRLYKDMLLARVLPETYTFNLMISFFTESGRLEDATNLFDKMP 535
            YN L+     +N++  +  L  +M    + P   T+N  I +  E  ++EDATNL D+M 
Sbjct: 597  YNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMM 656

Query: 534  VKGCRPNVFSFGILIKGYCNAGLGSEALEVFNKMGSFGCEPNMVIFNTLISCFCKEGNVG 355
             K   PNVFSF  LI+ +C       A EVF    S  C     +++ + +     G + 
Sbjct: 657  QKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSI-CGQKEGLYSLMFNELLAAGQLL 715

Query: 354  VAEMLVEKMRENGLSPNVVTFNCRISALC 268
             A  L+E + + G       +   + +LC
Sbjct: 716  KATELLEAVLDRGFELGTFLYKDLVESLC 744



 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 46/213 (21%), Positives = 91/213 (42%), Gaps = 5/213 (2%)
 Frame = -3

Query: 714  YNVLLESSFKENRLDCVSRLYKDMLLARVLPETYTFNLMISFFTESGRLEDATNLFDKMP 535
            YN+ +    K+ ++    R+ KDM          T+N +I       ++ +   L D+M 
Sbjct: 562  YNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMK 621

Query: 534  VKGCRPNVFSFGILIKGYCNAGLGSEALEVFNKMGSFGCEPNMVIFNTLISCFCKEGNVG 355
             KG  PN+ ++   I+  C      +A  + ++M      PN+  F  LI  FCK  +  
Sbjct: 622  EKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFD 681

Query: 354  VAEMLVEKM-----RENGLSPNVVTFNCRISALCSVGKVLEGYRIFSDMQMKDDDLGLPR 190
            +A+ + E       ++ GL      ++   + L + G++L+   +   +  +  +LG   
Sbjct: 682  MAQEVFETAVSICGQKEGL------YSLMFNELLAAGQLLKATELLEAVLDRGFELG--- 732

Query: 189  PNLITFNIMLEGFCKERMLEEAEVLVESMKEDG 91
                 +  ++E  CK+  LE A  ++  M + G
Sbjct: 733  --TFLYKDLVESLCKKDELEVASGILHKMIDRG 763