BLASTX nr result
ID: Coptis24_contig00024220
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00024220 (455 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003590818.1| PGPS/D12 [Medicago truncatula] gi|355479866|... 163 1e-38 ref|XP_003535433.1| PREDICTED: cell number regulator 10-like [Gl... 150 8e-35 ref|XP_003575228.1| PREDICTED: cell number regulator 2-like [Bra... 137 9e-31 dbj|BAK01385.1| predicted protein [Hordeum vulgare subsp. vulgare] 128 5e-28 dbj|BAK04959.1| predicted protein [Hordeum vulgare subsp. vulgare] 128 5e-28 >ref|XP_003590818.1| PGPS/D12 [Medicago truncatula] gi|355479866|gb|AES61069.1| PGPS/D12 [Medicago truncatula] Length = 137 Score = 163 bits (413), Expect = 1e-38 Identities = 73/114 (64%), Positives = 85/114 (74%) Frame = +3 Query: 114 MNVQSHSQQSKWSSGLCGPEDQDVGTCFITCCLPCVTFGQIAEMLDEGQSSCASHAVMYG 293 MN+ S KWS+ LCG ++ GTC ITCCLPC+TFGQIAE++DEG+SSCA +YG Sbjct: 1 MNIFGRSSPPKWSAKLCGC-GENPGTCLITCCLPCITFGQIAEVVDEGRSSCAMQGCVYG 59 Query: 294 LLMLCQCHCLYGAVYREKLRMKFSLPAEPCGDCCVHWCCGNCALCQEHAELTFR 455 LLM CH LY +YREKLR K+ LPAEPC DCCVH+CC CALCQEHAEL R Sbjct: 60 LLMTITCHWLYSCLYREKLRAKYGLPAEPCCDCCVHFCCDACALCQEHAELKAR 113 >ref|XP_003535433.1| PREDICTED: cell number regulator 10-like [Glycine max] Length = 136 Score = 150 bits (380), Expect = 8e-35 Identities = 69/104 (66%), Positives = 77/104 (74%) Frame = +3 Query: 144 KWSSGLCGPEDQDVGTCFITCCLPCVTFGQIAEMLDEGQSSCASHAVMYGLLMLCQCHCL 323 KWS+ C +D TC ITCCLPCVTFGQIAE++DEG+SSC YGLLML CH L Sbjct: 10 KWSAKFCDC-GEDPKTCLITCCLPCVTFGQIAEIVDEGRSSCFGQGCAYGLLMLVTCHWL 68 Query: 324 YGAVYREKLRMKFSLPAEPCGDCCVHWCCGNCALCQEHAELTFR 455 Y +YREKLR KF LPAEPC DCCV++CC CALCQEHAEL R Sbjct: 69 YSCLYREKLRSKFGLPAEPCCDCCVNFCCEACALCQEHAELKAR 112 >ref|XP_003575228.1| PREDICTED: cell number regulator 2-like [Brachypodium distachyon] Length = 187 Score = 137 bits (345), Expect = 9e-31 Identities = 58/113 (51%), Positives = 74/113 (65%), Gaps = 1/113 (0%) Frame = +3 Query: 120 VQSHSQQSKWSSGLCGPEDQDVGTCFITCCLPCVTFGQIAEMLDEGQSSCASHAVMYGLL 299 +Q Q+ WS+GLC D D G C +TC PC+TFGQ+AE++D G SSC S +Y L+ Sbjct: 44 MQGAQAQAAWSTGLCDCFD-DCGNCCVTCLCPCITFGQVAEIIDRGSSSCGSSGALYALI 102 Query: 300 MLCQ-CHCLYGAVYREKLRMKFSLPAEPCGDCCVHWCCGNCALCQEHAELTFR 455 ML CHC+Y YR K+R ++ L PC DCC+HWCC CALCQE+ EL R Sbjct: 103 MLLTGCHCVYSCFYRAKMRAQYGLQERPCADCCIHWCCEPCALCQEYRELKKR 155 >dbj|BAK01385.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 187 Score = 128 bits (321), Expect = 5e-28 Identities = 55/113 (48%), Positives = 72/113 (63%), Gaps = 1/113 (0%) Frame = +3 Query: 120 VQSHSQQSKWSSGLCGPEDQDVGTCFITCCLPCVTFGQIAEMLDEGQSSCASHAVMYGLL 299 +Q+ + + WS+GLC D D C +TC PCVTFGQIAE++D G +SC + +Y L+ Sbjct: 44 MQAQAPLAAWSTGLCDCFD-DCSNCCVTCLCPCVTFGQIAEIIDRGSTSCGASGALYALI 102 Query: 300 M-LCQCHCLYGAVYREKLRMKFSLPAEPCGDCCVHWCCGNCALCQEHAELTFR 455 M L C C+Y YR K+R + L PC DCC+HWCC CALCQE+ EL R Sbjct: 103 MCLTGCQCVYSCFYRAKMRAHYGLQESPCADCCIHWCCEPCALCQEYRELKKR 155 >dbj|BAK04959.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 246 Score = 128 bits (321), Expect = 5e-28 Identities = 55/113 (48%), Positives = 72/113 (63%), Gaps = 1/113 (0%) Frame = +3 Query: 120 VQSHSQQSKWSSGLCGPEDQDVGTCFITCCLPCVTFGQIAEMLDEGQSSCASHAVMYGLL 299 +Q+ + + WS+GLC D D C +TC PCVTFGQIAE++D G +SC + +Y L+ Sbjct: 103 MQAQAPLAAWSTGLCDCFD-DCSNCCVTCLCPCVTFGQIAEIIDRGSTSCGASGALYALI 161 Query: 300 M-LCQCHCLYGAVYREKLRMKFSLPAEPCGDCCVHWCCGNCALCQEHAELTFR 455 M L C C+Y YR K+R + L PC DCC+HWCC CALCQE+ EL R Sbjct: 162 MCLTGCQCVYSCFYRAKMRAHYGLQESPCADCCIHWCCEPCALCQEYRELKKR 214