BLASTX nr result

ID: Coptis24_contig00024215 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024215
         (611 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277625.2| PREDICTED: probable ATP-dependent RNA helica...   320   1e-85
emb|CBI15516.3| unnamed protein product [Vitis vinifera]              320   1e-85
emb|CBH32617.1| ATP binding protein, putative, expressed [Tritic...   318   5e-85
dbj|BAJ86954.1| predicted protein [Hordeum vulgare subsp. vulgare]    318   6e-85
tpg|DAA53732.1| TPA: hypothetical protein ZEAMMB73_195625 [Zea m...   315   5e-84

>ref|XP_002277625.2| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Vitis
            vinifera]
          Length = 1178

 Score =  320 bits (820), Expect = 1e-85
 Identities = 156/203 (76%), Positives = 170/203 (83%)
 Frame = -1

Query: 611  IVDEIHERGTNEDFLLVVXXXXXXXXXXXXXXLMSATLNAELFSSYFGGAPMVYIPGFTY 432
            IVDEIHERG NEDFLL+V              LMSATLNAELFSSYFGGAP ++IPGFTY
Sbjct: 404  IVDEIHERGMNEDFLLIVLKDLLPRRPELRLILMSATLNAELFSSYFGGAPSIHIPGFTY 463

Query: 431  PVQTHFLEDVLEVTRYDLTPYNQTDDYGQDKSWKTQKQTLRKRKSQITFIVEDALEVANF 252
            PV+THFLE++LE+T Y LTPYNQ DDYGQ+K WK QKQ LRKRKSQI   VEDALEVANF
Sbjct: 464  PVRTHFLENILEMTGYRLTPYNQIDDYGQEKVWKMQKQALRKRKSQIASSVEDALEVANF 523

Query: 251  KDYSPQTQDSLSCWNPDSIGFNLIENVLCHKCSNETPGAILVFMTGWDDINALKDQLQAH 72
              YSP+TQDSLSCWNPDSIGFNLIE+ LCH    E PGA+LVFMTGWDDIN+LKDQL+AH
Sbjct: 524  DAYSPRTQDSLSCWNPDSIGFNLIEHALCHIVKKERPGAVLVFMTGWDDINSLKDQLEAH 583

Query: 71   PLLGDPSRVLLLSCHGSMASSEQ 3
            PLLGDPSRVLLL+CHGSMASSEQ
Sbjct: 584  PLLGDPSRVLLLACHGSMASSEQ 606


>emb|CBI15516.3| unnamed protein product [Vitis vinifera]
          Length = 1057

 Score =  320 bits (820), Expect = 1e-85
 Identities = 156/203 (76%), Positives = 170/203 (83%)
 Frame = -1

Query: 611 IVDEIHERGTNEDFLLVVXXXXXXXXXXXXXXLMSATLNAELFSSYFGGAPMVYIPGFTY 432
           IVDEIHERG NEDFLL+V              LMSATLNAELFSSYFGGAP ++IPGFTY
Sbjct: 283 IVDEIHERGMNEDFLLIVLKDLLPRRPELRLILMSATLNAELFSSYFGGAPSIHIPGFTY 342

Query: 431 PVQTHFLEDVLEVTRYDLTPYNQTDDYGQDKSWKTQKQTLRKRKSQITFIVEDALEVANF 252
           PV+THFLE++LE+T Y LTPYNQ DDYGQ+K WK QKQ LRKRKSQI   VEDALEVANF
Sbjct: 343 PVRTHFLENILEMTGYRLTPYNQIDDYGQEKVWKMQKQALRKRKSQIASSVEDALEVANF 402

Query: 251 KDYSPQTQDSLSCWNPDSIGFNLIENVLCHKCSNETPGAILVFMTGWDDINALKDQLQAH 72
             YSP+TQDSLSCWNPDSIGFNLIE+ LCH    E PGA+LVFMTGWDDIN+LKDQL+AH
Sbjct: 403 DAYSPRTQDSLSCWNPDSIGFNLIEHALCHIVKKERPGAVLVFMTGWDDINSLKDQLEAH 462

Query: 71  PLLGDPSRVLLLSCHGSMASSEQ 3
           PLLGDPSRVLLL+CHGSMASSEQ
Sbjct: 463 PLLGDPSRVLLLACHGSMASSEQ 485


>emb|CBH32617.1| ATP binding protein, putative, expressed [Triticum aestivum]
          Length = 1072

 Score =  318 bits (815), Expect = 5e-85
 Identities = 152/203 (74%), Positives = 172/203 (84%)
 Frame = -1

Query: 611 IVDEIHERGTNEDFLLVVXXXXXXXXXXXXXXLMSATLNAELFSSYFGGAPMVYIPGFTY 432
           IVDEIHERG NEDFLL+V              LMSATLNAE+FSSYFGGAPM++IPGFTY
Sbjct: 284 IVDEIHERGMNEDFLLIVLKDLLPRRPELRLVLMSATLNAEMFSSYFGGAPMIHIPGFTY 343

Query: 431 PVQTHFLEDVLEVTRYDLTPYNQTDDYGQDKSWKTQKQTLRKRKSQITFIVEDALEVANF 252
           PV++ FLED+LEVT + LTPYNQ DDYGQ+KSWK QKQ LRKRKSQI  +VEDA++ A+ 
Sbjct: 344 PVRSRFLEDILEVTGHRLTPYNQIDDYGQEKSWKMQKQALRKRKSQIASVVEDAVKAADL 403

Query: 251 KDYSPQTQDSLSCWNPDSIGFNLIENVLCHKCSNETPGAILVFMTGWDDINALKDQLQAH 72
           +DYSPQT+DSLSCWNPDSIGFNLIENVLCH C  E  GA+LVFMTGWDDIN LKDQLQ++
Sbjct: 404 RDYSPQTRDSLSCWNPDSIGFNLIENVLCHICQKERDGAVLVFMTGWDDINTLKDQLQSN 463

Query: 71  PLLGDPSRVLLLSCHGSMASSEQ 3
           PLLGDPS+VLLL+CHGSMASSEQ
Sbjct: 464 PLLGDPSKVLLLACHGSMASSEQ 486


>dbj|BAJ86954.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1247

 Score =  318 bits (814), Expect = 6e-85
 Identities = 151/203 (74%), Positives = 172/203 (84%)
 Frame = -1

Query: 611  IVDEIHERGTNEDFLLVVXXXXXXXXXXXXXXLMSATLNAELFSSYFGGAPMVYIPGFTY 432
            IVDEIHERG NEDFLL+V              LMSATLNAE+FSSYFGGAPM++IPGFTY
Sbjct: 459  IVDEIHERGMNEDFLLIVLKDLLPRRPELRLVLMSATLNAEMFSSYFGGAPMIHIPGFTY 518

Query: 431  PVQTHFLEDVLEVTRYDLTPYNQTDDYGQDKSWKTQKQTLRKRKSQITFIVEDALEVANF 252
            PV++ FLED+LE+T + LTPYNQ DDYGQ+KSWK QKQ LRKRKSQI  +VEDA++ A+ 
Sbjct: 519  PVRSRFLEDILEITGHRLTPYNQIDDYGQEKSWKMQKQALRKRKSQIASVVEDAVKAADL 578

Query: 251  KDYSPQTQDSLSCWNPDSIGFNLIENVLCHKCSNETPGAILVFMTGWDDINALKDQLQAH 72
            +DYSPQT+DSLSCWNPDSIGFNLIENVLCH C  E  GA+LVFMTGWDDIN LKDQLQ++
Sbjct: 579  RDYSPQTRDSLSCWNPDSIGFNLIENVLCHICQKERDGAVLVFMTGWDDINTLKDQLQSN 638

Query: 71   PLLGDPSRVLLLSCHGSMASSEQ 3
            PLLGDPS+VLLL+CHGSMASSEQ
Sbjct: 639  PLLGDPSKVLLLACHGSMASSEQ 661


>tpg|DAA53732.1| TPA: hypothetical protein ZEAMMB73_195625 [Zea mays]
          Length = 1381

 Score =  315 bits (806), Expect = 5e-84
 Identities = 152/203 (74%), Positives = 172/203 (84%)
 Frame = -1

Query: 611  IVDEIHERGTNEDFLLVVXXXXXXXXXXXXXXLMSATLNAELFSSYFGGAPMVYIPGFTY 432
            IVDEIHERG NEDFLL+V              LMSATLNAELFSSYFGGAPM++IPGFTY
Sbjct: 600  IVDEIHERGMNEDFLLIVLKDLLPRRPELRLILMSATLNAELFSSYFGGAPMIHIPGFTY 659

Query: 431  PVQTHFLEDVLEVTRYDLTPYNQTDDYGQDKSWKTQKQTLRKRKSQITFIVEDALEVANF 252
            PV++HFLED+LE+T + LTPYNQ DDYGQ+KSWK QKQ L+KRKSQI  +VEDA+E A+ 
Sbjct: 660  PVRSHFLEDILEITGHWLTPYNQIDDYGQEKSWKMQKQALQKRKSQIASVVEDAVEAADL 719

Query: 251  KDYSPQTQDSLSCWNPDSIGFNLIENVLCHKCSNETPGAILVFMTGWDDINALKDQLQAH 72
            +DYS +T+DSLSCWNPDSIGFNLIENVLCH C  E  GAILVFMTGWDDINALK+QLQA+
Sbjct: 720  RDYSSRTRDSLSCWNPDSIGFNLIENVLCHICQKERSGAILVFMTGWDDINALKEQLQAN 779

Query: 71   PLLGDPSRVLLLSCHGSMASSEQ 3
            PLLG+PS VLLL+CHGSMASSEQ
Sbjct: 780  PLLGNPSAVLLLACHGSMASSEQ 802


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