BLASTX nr result

ID: Coptis24_contig00024212 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024212
         (916 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34509.3| unnamed protein product [Vitis vinifera]              402   e-110
ref|XP_002299456.1| predicted protein [Populus trichocarpa] gi|2...   400   e-109
ref|XP_002518849.1| 3-oxoacyl-[acyl-carrier-protein] synthase, p...   396   e-108
ref|XP_003530435.1| PREDICTED: 3-oxoacyl-[acyl-carrier-protein] ...   381   e-103
ref|XP_002265207.1| PREDICTED: 3-oxoacyl-[acyl-carrier-protein] ...   379   e-103

>emb|CBI34509.3| unnamed protein product [Vitis vinifera]
          Length = 488

 Score =  402 bits (1032), Expect = e-110
 Identities = 201/279 (72%), Positives = 233/279 (83%), Gaps = 1/279 (0%)
 Frame = +2

Query: 83  MVAITAPCSSNLVIINGELRSNSGVSSVQYNGLRPLETKQMVSDKSKQTGFLCSSTRRAR 262
           M A    CSS +       R     S  QY+GLRP+E+K+M S   + +G + S  R+ R
Sbjct: 1   MAAFAGICSSGV-----RFRGKESGSLAQYHGLRPVESKKMASAMVRPSGSISSPARKCR 55

Query: 263 PVRVINS-TTSAPKREKDPKKRVVITGMGLVSVFGNDVTTFYDRLLAGESGISPIDRFDA 439
            +R + S T SAPKREKDPKKR+VITGMGLVSVFG+D+ TFYD+LL G SGIS IDRFDA
Sbjct: 56  TIRAVASPTVSAPKREKDPKKRIVITGMGLVSVFGSDIDTFYDKLLQGVSGISLIDRFDA 115

Query: 440 STFSVRFAGQIRDFSSEGYIDGKNDRRLDDCWRYCIVAGKKALEDASLGPGVLDTMDKSK 619
           S FSVRF GQIRDFSS+GYIDGKNDRRLDDCWRYC+VAG++AL++ASLG  VL+TMD+S+
Sbjct: 116 SNFSVRFGGQIRDFSSKGYIDGKNDRRLDDCWRYCLVAGRRALDNASLGTEVLETMDRSR 175

Query: 620 IGVLVGTGMGGLSAFSSGVESLTLKGFKKISPFFIPYSITNMGSALLAIDTGLMGPNYSI 799
           IGVLVG+GMGGL+AFS+GVE+L  KG+KKI+PFFIPYSITNMGSALLAIDTGLMGPNYSI
Sbjct: 176 IGVLVGSGMGGLTAFSNGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSI 235

Query: 800 STACATANYCFYAAANHIRRGEADIMVTGGTEAAVIATG 916
           STACATANYCFYAAANHIRRGEADIMV GGTEAA++ATG
Sbjct: 236 STACATANYCFYAAANHIRRGEADIMVAGGTEAAIMATG 274


>ref|XP_002299456.1| predicted protein [Populus trichocarpa] gi|222846714|gb|EEE84261.1|
           predicted protein [Populus trichocarpa]
          Length = 495

 Score =  400 bits (1028), Expect = e-109
 Identities = 202/276 (73%), Positives = 237/276 (85%), Gaps = 3/276 (1%)
 Frame = +2

Query: 98  APCSSNLVIINGELRSNSGVSSVQYNGLRPLETKQMVSDKSKQTGFLCSS--TRRARPVR 271
           A CSSN++  + E+ S+ G S  QY GLRP+E  Q+     + +G + +S  T ++R +R
Sbjct: 7   AACSSNVLFGSREVGSD-GASLAQYRGLRPVENMQLAPTGRRPSGSISTSGMTSKSRTIR 65

Query: 272 -VINSTTSAPKREKDPKKRVVITGMGLVSVFGNDVTTFYDRLLAGESGISPIDRFDASTF 448
            +++ T SAPKREKDPKKRVVITGMGLVSVFG+ + TFYD+LL GESGIS IDRFDAS+F
Sbjct: 66  AMVSQTVSAPKREKDPKKRVVITGMGLVSVFGSGIDTFYDKLLEGESGISLIDRFDASSF 125

Query: 449 SVRFAGQIRDFSSEGYIDGKNDRRLDDCWRYCIVAGKKALEDASLGPGVLDTMDKSKIGV 628
           SVRFAGQIRDFSS+GYIDGKNDRRLDDCWRYC+VAGK+ALEDA+LG  VL+ MD+++IGV
Sbjct: 126 SVRFAGQIRDFSSKGYIDGKNDRRLDDCWRYCLVAGKRALEDANLGSEVLENMDRTRIGV 185

Query: 629 LVGTGMGGLSAFSSGVESLTLKGFKKISPFFIPYSITNMGSALLAIDTGLMGPNYSISTA 808
           LVGTGMGGL+AFS+GVESL  KG+KK+SPFFIPYSITNMGSALLAIDTGLMGPNYSISTA
Sbjct: 186 LVGTGMGGLTAFSNGVESLVQKGYKKMSPFFIPYSITNMGSALLAIDTGLMGPNYSISTA 245

Query: 809 CATANYCFYAAANHIRRGEADIMVTGGTEAAVIATG 916
           CATANYCFY+AANHIRRGEADIMV GGTEA+VI  G
Sbjct: 246 CATANYCFYSAANHIRRGEADIMVAGGTEASVIPAG 281


>ref|XP_002518849.1| 3-oxoacyl-[acyl-carrier-protein] synthase, putative [Ricinus
           communis] gi|223541836|gb|EEF43382.1|
           3-oxoacyl-[acyl-carrier-protein] synthase, putative
           [Ricinus communis]
          Length = 485

 Score =  396 bits (1018), Expect = e-108
 Identities = 201/279 (72%), Positives = 236/279 (84%), Gaps = 1/279 (0%)
 Frame = +2

Query: 83  MVAITAPCSSNLVIINGELRSNSGVSSVQYNGLRPLETKQMVSDKSKQTGFLCSSTRRAR 262
           M +I   CSSN++ +       +G S  Q+NGLRP+E  QM +  +K TGFL +   ++ 
Sbjct: 1   MASIAGTCSSNVLCMK------NGASLGQFNGLRPVENMQMAA--TKPTGFLFTLAPKSG 52

Query: 263 PVRVINSTT-SAPKREKDPKKRVVITGMGLVSVFGNDVTTFYDRLLAGESGISPIDRFDA 439
            ++ + S   SAPKRE+DPKKRVVITGMGLVSVFG+D+ TFY++LL GESGIS IDRFDA
Sbjct: 53  IIKAMASPNISAPKRERDPKKRVVITGMGLVSVFGSDIDTFYNKLLEGESGISLIDRFDA 112

Query: 440 STFSVRFAGQIRDFSSEGYIDGKNDRRLDDCWRYCIVAGKKALEDASLGPGVLDTMDKSK 619
           S FSVRFAGQIRDFSS+GYIDGKNDRRLDDCWRYC+VAGK+AL+DA+LG  VL+ MD++K
Sbjct: 113 SGFSVRFAGQIRDFSSKGYIDGKNDRRLDDCWRYCLVAGKRALDDANLGSQVLEDMDRTK 172

Query: 620 IGVLVGTGMGGLSAFSSGVESLTLKGFKKISPFFIPYSITNMGSALLAIDTGLMGPNYSI 799
           IGVL+GTGMGGL+AFS+GVE+L  KG+KKI+PFFIPYSITNMGSALLAIDTGLMGPNYSI
Sbjct: 173 IGVLIGTGMGGLTAFSNGVEALVQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSI 232

Query: 800 STACATANYCFYAAANHIRRGEADIMVTGGTEAAVIATG 916
           STACATANYCFYAAANHIRRGEADIMV GGTEAAV+ TG
Sbjct: 233 STACATANYCFYAAANHIRRGEADIMVVGGTEAAVMPTG 271


>ref|XP_003530435.1| PREDICTED: 3-oxoacyl-[acyl-carrier-protein] synthase I,
           chloroplastic-like [Glycine max]
          Length = 491

 Score =  381 bits (979), Expect = e-103
 Identities = 195/279 (69%), Positives = 224/279 (80%), Gaps = 1/279 (0%)
 Frame = +2

Query: 83  MVAITAPCSSNLVIINGELRSNSGVSSVQYNGLRPLETKQMVSDKSKQTGFLCSSTRRAR 262
           M  I   C    ++ N    +N  +S V Y GLR  +  QM S     +    SS  R R
Sbjct: 1   MAGIAGTCPLGALLRNSVSENNGKISVVHYEGLRLQQRMQMPSPSQYISA--SSSAPRCR 58

Query: 263 PVRVINS-TTSAPKREKDPKKRVVITGMGLVSVFGNDVTTFYDRLLAGESGISPIDRFDA 439
            ++ + S T  APKREKDPKKRVVITGMGLVSVFG+DV  FY++LL GESGIS IDRFDA
Sbjct: 59  TIKAMASPTVGAPKREKDPKKRVVITGMGLVSVFGSDVDAFYNKLLEGESGISLIDRFDA 118

Query: 440 STFSVRFAGQIRDFSSEGYIDGKNDRRLDDCWRYCIVAGKKALEDASLGPGVLDTMDKSK 619
           S FSVRF GQIRDFSSEGYIDGKNDRRLD+CWRYCIVAGK+AL+DA+LG  VLDTMDK++
Sbjct: 119 SNFSVRFGGQIRDFSSEGYIDGKNDRRLDNCWRYCIVAGKRALDDANLGKQVLDTMDKTR 178

Query: 620 IGVLVGTGMGGLSAFSSGVESLTLKGFKKISPFFIPYSITNMGSALLAIDTGLMGPNYSI 799
           IGVLVG+GMGG++AFS+GVE+L  KG+KKI+PFFIPYSITNMGSALLAIDTGLMGPNYSI
Sbjct: 179 IGVLVGSGMGGITAFSNGVEALVQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSI 238

Query: 800 STACATANYCFYAAANHIRRGEADIMVTGGTEAAVIATG 916
           STACATANYCF AAANHIR+GEADIMV GGTEAA++ +G
Sbjct: 239 STACATANYCFCAAANHIRKGEADIMVVGGTEAAIMPSG 277


>ref|XP_002265207.1| PREDICTED: 3-oxoacyl-[acyl-carrier-protein] synthase I,
           chloroplastic-like [Vitis vinifera]
          Length = 453

 Score =  379 bits (972), Expect = e-103
 Identities = 186/239 (77%), Positives = 213/239 (89%), Gaps = 1/239 (0%)
 Frame = +2

Query: 203 MVSDKSKQTGFLCSSTRRARPVRVINS-TTSAPKREKDPKKRVVITGMGLVSVFGNDVTT 379
           M S   + +G + S  R+ R +R + S T SAPKREKDPKKR+VITGMGLVSVFG+D+ T
Sbjct: 1   MASAMVRPSGSISSPARKCRTIRAVASPTVSAPKREKDPKKRIVITGMGLVSVFGSDIDT 60

Query: 380 FYDRLLAGESGISPIDRFDASTFSVRFAGQIRDFSSEGYIDGKNDRRLDDCWRYCIVAGK 559
           FYD+LL G SGIS IDRFDAS FSVRF GQIRDFSS+GYIDGKNDRRLDDCWRYC+VAG+
Sbjct: 61  FYDKLLQGVSGISLIDRFDASNFSVRFGGQIRDFSSKGYIDGKNDRRLDDCWRYCLVAGR 120

Query: 560 KALEDASLGPGVLDTMDKSKIGVLVGTGMGGLSAFSSGVESLTLKGFKKISPFFIPYSIT 739
           +AL++ASLG  VL+TMD+S+IGVLVG+GMGGL+AFS+GVE+L  KG+KKI+PFFIPYSIT
Sbjct: 121 RALDNASLGTEVLETMDRSRIGVLVGSGMGGLTAFSNGVEALIQKGYKKITPFFIPYSIT 180

Query: 740 NMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIRRGEADIMVTGGTEAAVIATG 916
           NMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIRRGEADIMV GGTEAA++ATG
Sbjct: 181 NMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIRRGEADIMVAGGTEAAIMATG 239


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