BLASTX nr result
ID: Coptis24_contig00024211
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00024211
(762 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN61992.1| hypothetical protein VITISV_030445 [Vitis vinifera] 212 8e-53
ref|XP_002281118.2| PREDICTED: transcription factor bHLH110-like... 211 1e-52
ref|XP_002510430.1| transcription factor, putative [Ricinus comm... 189 7e-46
ref|NP_174087.1| transcription factor bHLH110 [Arabidopsis thali... 182 7e-44
ref|XP_002890742.1| hypothetical protein ARALYDRAFT_472970 [Arab... 179 8e-43
>emb|CAN61992.1| hypothetical protein VITISV_030445 [Vitis vinifera]
Length = 512
Score = 212 bits (539), Expect = 8e-53
Identities = 112/180 (62%), Positives = 137/180 (76%), Gaps = 3/180 (1%)
Frame = +1
Query: 1 KETPSFDLDHMKESSHWLTSSSNKVSSFANEVTETKRSSSVMEPKASNTASKKPRFESRT 180
K++ SF LDH+++S++ ++SS+K+S F N V E KR SS +EPKA+ KK R ESR
Sbjct: 273 KDSLSFGLDHLQZSTNRPSNSSSKISPFTNGVAEVKRPSSFLEPKATQATPKKSRLESRA 332
Query: 181 SLAPFKVRKEKLGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQDQVETLSVPYMKSL 360
S P KVRKEKLGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQ+QVETLSVPYMKS
Sbjct: 333 SCPPIKVRKEKLGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQNQVETLSVPYMKSS 392
Query: 361 CNNSARSIHKNLKEGD-DEDTKRDLRSRGLCLVPMSCISYIASDNIGG--WLGSDYGGRT 531
N S+ S+ +G+ E+ +RDLRSRGLCLVP+SC+SY+ +D GG W +GG T
Sbjct: 393 RNKSSISMQGGSADGEGSEEPRRDLRSRGLCLVPLSCMSYVTTDCGGGGVWPPPSFGGGT 452
>ref|XP_002281118.2| PREDICTED: transcription factor bHLH110-like [Vitis vinifera]
gi|302142540|emb|CBI19743.3| unnamed protein product
[Vitis vinifera]
Length = 427
Score = 211 bits (537), Expect = 1e-52
Identities = 112/180 (62%), Positives = 137/180 (76%), Gaps = 3/180 (1%)
Frame = +1
Query: 1 KETPSFDLDHMKESSHWLTSSSNKVSSFANEVTETKRSSSVMEPKASNTASKKPRFESRT 180
K++ SF LDH+++S++ ++SS+K+S F N V E KR SS +EPKA+ KK R ESR
Sbjct: 248 KDSLSFGLDHLQQSTNRPSNSSSKISPFTNGVAEVKRPSSFLEPKATQATPKKSRLESRA 307
Query: 181 SLAPFKVRKEKLGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQDQVETLSVPYMKSL 360
S P KVRKEKLGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQ+QVETLSVPYMKS
Sbjct: 308 SCPPIKVRKEKLGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQNQVETLSVPYMKSS 367
Query: 361 CNNSARSIHKNLKEGD-DEDTKRDLRSRGLCLVPMSCISYIASDNIGG--WLGSDYGGRT 531
N S+ S+ +G+ E+ +RDLRSRGLCLVP+SC+SY+ +D GG W +GG T
Sbjct: 368 RNKSSISMQGGSADGEGSEEPRRDLRSRGLCLVPLSCMSYVTTDCGGGGVWPPPSFGGGT 427
>ref|XP_002510430.1| transcription factor, putative [Ricinus communis]
gi|223551131|gb|EEF52617.1| transcription factor,
putative [Ricinus communis]
Length = 436
Score = 189 bits (479), Expect = 7e-46
Identities = 112/186 (60%), Positives = 133/186 (71%), Gaps = 9/186 (4%)
Frame = +1
Query: 1 KETPSFDLDHMKESSHWLTSSSNKVSSFAN-EVTETKR-SSSVMEPKAS-NTASKKPRFE 171
K+ S+D D M+ +H + S +K+SS E TE KR SS+MEPKA+ A KK R E
Sbjct: 254 KDNISYDFDRMQ--NHMPSCSHSKISSITTKETTEAKRPGSSLMEPKATLQAAPKKSRLE 311
Query: 172 SRTSLAPFKVRKEKLGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQDQVETLSVPYM 351
+R S PFKVRKEKLGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQ+QVETLSVPYM
Sbjct: 312 TRASCPPFKVRKEKLGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQNQVETLSVPYM 371
Query: 352 KSLCNNSARSIHK--NLKEGDDEDTKRDLRSRGLCLVPMSCISYIASDNIGG----WLGS 513
KS N S+R+ ++EG+ E K+DLRSRGLCLVP+SC+SY+ D G W
Sbjct: 372 KSSRNKSSRNSQSGPTVEEGNFE-PKKDLRSRGLCLVPLSCMSYVTGDGGGSSGNIWPPP 430
Query: 514 DYGGRT 531
+GG T
Sbjct: 431 SFGGGT 436
>ref|NP_174087.1| transcription factor bHLH110 [Arabidopsis thaliana]
gi|218563530|sp|Q9SFZ3.2|BH110_ARATH RecName:
Full=Transcription factor bHLH110; AltName: Full=Basic
helix-loop-helix protein 110; Short=AtbHLH110;
Short=bHLH 110; AltName: Full=Transcription factor EN
59; AltName: Full=bHLH transcription factor bHLH110
gi|332192739|gb|AEE30860.1| transcription factor bHLH110
[Arabidopsis thaliana]
Length = 453
Score = 182 bits (462), Expect = 7e-44
Identities = 104/180 (57%), Positives = 134/180 (74%), Gaps = 10/180 (5%)
Frame = +1
Query: 10 PSFDLD---HMKESSHWLTSS-SNKVSSFANE--VTETKRSSSVMEPKASNTASKKPRFE 171
PSF L H++++ L+SS ++++ F+NE +E KR + +M KA ASKKPR E
Sbjct: 264 PSFGLPFHHHLQQTLPHLSSSPTHQMEMFSNEPQTSEGKRHNFLMATKAGENASKKPRVE 323
Query: 172 SRTSLAPFKVRKEKLGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQDQVETLSVPYM 351
SR+S PFKVRKEKLGDRIAALQQLV+PFGKTDTASVLMEAIGYIKFLQ Q+ETLSVPYM
Sbjct: 324 SRSSCPPFKVRKEKLGDRIAALQQLVSPFGKTDTASVLMEAIGYIKFLQSQIETLSVPYM 383
Query: 352 KSLCN--NSARSIHKNLKEGDDEDTKRDLRSRGLCLVPMSCISYIASD--NIGGWLGSDY 519
++ N A + +EGD+E+T RDLRSRGLCLVP+SC++Y+ D + GG +G+ +
Sbjct: 384 RASRNRPGKASQLVSQSQEGDEEET-RDLRSRGLCLVPLSCMTYVTGDGGDGGGGVGTGF 442
>ref|XP_002890742.1| hypothetical protein ARALYDRAFT_472970 [Arabidopsis lyrata subsp.
lyrata] gi|297336584|gb|EFH67001.1| hypothetical protein
ARALYDRAFT_472970 [Arabidopsis lyrata subsp. lyrata]
Length = 449
Score = 179 bits (453), Expect = 8e-43
Identities = 101/182 (55%), Positives = 129/182 (70%), Gaps = 14/182 (7%)
Frame = +1
Query: 28 HMKES-SHWLTSSSNKVSSFANE--VTETKRSSSVMEPKASNTASKKPRFESRTSLAPFK 198
H++++ H +S ++++ F+NE +E KR + +M K ASKKPR ESR+S PFK
Sbjct: 269 HLQQTLPHPSSSPTHQMEMFSNESQTSEGKRHNFLMATKVGENASKKPRVESRSSCPPFK 328
Query: 199 VRKEKLGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQDQVETLSVPYMKSLCNNS-- 372
VRKEKLGDRIAALQQLV+PFGKTDTASVLMEAIGYIKFLQ Q+ETLSVPYM++ N +
Sbjct: 329 VRKEKLGDRIAALQQLVSPFGKTDTASVLMEAIGYIKFLQSQIETLSVPYMRASRNRTGK 388
Query: 373 ARSIHKNLKEGDDEDTKRDLRSRGLCLVPMSCISYIASDNIGGWLG---------SDYGG 525
A + +EGD+E+T RDLRSRGLCLVP+SC++Y+ D G G +GG
Sbjct: 389 ASQLGSQSQEGDEEET-RDLRSRGLCLVPLSCMTYVTGDGGDGGDGVGSGFWPTPPGFGG 447
Query: 526 RT 531
RT
Sbjct: 448 RT 449