BLASTX nr result

ID: Coptis24_contig00024203 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024203
         (203 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFZ62129.1| acyl-CoA binding protein 3B [Vernicia fordii] gi|...   101   7e-20
ref|XP_002279459.2| PREDICTED: uncharacterized protein LOC100268...    98   8e-19
emb|CBI33720.3| unnamed protein product [Vitis vinifera]               98   8e-19
ref|XP_002327195.1| predicted protein [Populus trichocarpa] gi|2...    98   8e-19
emb|CAN72170.1| hypothetical protein VITISV_036093 [Vitis vinifera]    98   8e-19

>gb|AFZ62129.1| acyl-CoA binding protein 3B [Vernicia fordii]
           gi|428754010|gb|AFZ62130.1| acyl-CoA binding protein 3B
           [Vernicia fordii]
          Length = 375

 Score =  101 bits (251), Expect = 7e-20
 Identities = 45/66 (68%), Positives = 54/66 (81%)
 Frame = +1

Query: 1   LFGAASRFVNCGDNVEELSKLGNDVLMKLYGLHKVAMEGPCRESPPLALKVSARTKWNAW 180
           +F  A++FV  GD  E L+ +G+DV M+LYGLHKVA EGPCRE PP+ALKV+AR KWNAW
Sbjct: 225 IFAKAAKFVESGDKDEGLTSVGSDVQMELYGLHKVATEGPCREQPPMALKVAARAKWNAW 284

Query: 181 QRLGNM 198
           QRLGNM
Sbjct: 285 QRLGNM 290


>ref|XP_002279459.2| PREDICTED: uncharacterized protein LOC100268114 [Vitis vinifera]
          Length = 498

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 44/66 (66%), Positives = 51/66 (77%)
 Frame = +1

Query: 4   FGAASRFVNCGDNVEELSKLGNDVLMKLYGLHKVAMEGPCRESPPLALKVSARTKWNAWQ 183
           FGAA+ FV    N   +  L +DV M LYGLHKVA+EGPCRE PP+ALK+SAR KWNAWQ
Sbjct: 393 FGAAAAFVGSEKNANHILNLNSDVKMHLYGLHKVAIEGPCREPPPMALKISARAKWNAWQ 452

Query: 184 RLGNMT 201
           RLGNM+
Sbjct: 453 RLGNMS 458


>emb|CBI33720.3| unnamed protein product [Vitis vinifera]
          Length = 240

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 44/66 (66%), Positives = 51/66 (77%)
 Frame = +1

Query: 4   FGAASRFVNCGDNVEELSKLGNDVLMKLYGLHKVAMEGPCRESPPLALKVSARTKWNAWQ 183
           FGAA+ FV    N   +  L +DV M LYGLHKVA+EGPCRE PP+ALK+SAR KWNAWQ
Sbjct: 135 FGAAAAFVGSEKNANHILNLNSDVKMHLYGLHKVAIEGPCREPPPMALKISARAKWNAWQ 194

Query: 184 RLGNMT 201
           RLGNM+
Sbjct: 195 RLGNMS 200


>ref|XP_002327195.1| predicted protein [Populus trichocarpa] gi|222835510|gb|EEE73945.1|
           predicted protein [Populus trichocarpa]
          Length = 375

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 44/68 (64%), Positives = 56/68 (82%), Gaps = 1/68 (1%)
 Frame = +1

Query: 1   LFGAASRFVN-CGDNVEELSKLGNDVLMKLYGLHKVAMEGPCRESPPLALKVSARTKWNA 177
           +FG A++FV   G+  E L+ +G+D+ M+LYGLHK+A EGPCRE PP+ALKVSAR KWNA
Sbjct: 216 IFGEAAKFVEESGNKDERLASVGSDLQMELYGLHKIATEGPCREQPPMALKVSARAKWNA 275

Query: 178 WQRLGNMT 201
           WQRLGNM+
Sbjct: 276 WQRLGNMS 283


>emb|CAN72170.1| hypothetical protein VITISV_036093 [Vitis vinifera]
          Length = 920

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 44/66 (66%), Positives = 51/66 (77%)
 Frame = +1

Query: 4   FGAASRFVNCGDNVEELSKLGNDVLMKLYGLHKVAMEGPCRESPPLALKVSARTKWNAWQ 183
           FGAA+ FV    N   +  L +DV M LYGLHKVA+EGPCRE PP+ALK+SAR KWNAWQ
Sbjct: 371 FGAAAAFVGSEKNANHILNLNSDVKMHLYGLHKVAIEGPCREPPPMALKISARAKWNAWQ 430

Query: 184 RLGNMT 201
           RLGNM+
Sbjct: 431 RLGNMS 436