BLASTX nr result

ID: Coptis24_contig00024198 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024198
         (719 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302058.1| predicted protein [Populus trichocarpa] gi|2...   233   2e-59
ref|XP_003632422.1| PREDICTED: poly [ADP-ribose] polymerase 1-li...   231   9e-59
emb|CBI37089.3| unnamed protein product [Vitis vinifera]              231   9e-59
ref|XP_002263185.1| PREDICTED: poly [ADP-ribose] polymerase 1-li...   231   9e-59
ref|XP_002521021.1| poly [ADP-ribose] polymerase, putative [Rici...   230   3e-58

>ref|XP_002302058.1| predicted protein [Populus trichocarpa] gi|222843784|gb|EEE81331.1|
            predicted protein [Populus trichocarpa]
          Length = 996

 Score =  233 bits (595), Expect = 2e-59
 Identities = 112/137 (81%), Positives = 125/137 (91%), Gaps = 1/137 (0%)
 Frame = +2

Query: 2    QGLRIAPPEAPTTGYKFGKGVYFADMVSKSAHYCYTDKKNPVGLMLLSEVALGKVYELNK 181
            QGLRIAPPEAPTTGY FGKGVYFAD+VSKSA YC+TDKKNPVGLMLLSEVALG+VYEL K
Sbjct: 858  QGLRIAPPEAPTTGYMFGKGVYFADLVSKSAQYCFTDKKNPVGLMLLSEVALGEVYELKK 917

Query: 182  DSYMDKPPQGMHSTKGLGKMIPQPSEYVKWRDDVVVPCGKPVSSGVMASQL-YNQYIVYD 358
             +YM+KPP+G HSTKGLGK +P+ S YVKWR+DV+VPCGKPVSS V AS+L YN+YIVY+
Sbjct: 918  ATYMEKPPEGKHSTKGLGKKVPEESGYVKWRNDVIVPCGKPVSSKVKASELMYNEYIVYN 977

Query: 359  TAQVKMQFLLKVRFPHK 409
            TAQVKMQFLLKVRF HK
Sbjct: 978  TAQVKMQFLLKVRFHHK 994


>ref|XP_003632422.1| PREDICTED: poly [ADP-ribose] polymerase 1-like isoform 2 [Vitis
            vinifera]
          Length = 992

 Score =  231 bits (590), Expect = 9e-59
 Identities = 112/137 (81%), Positives = 122/137 (89%), Gaps = 1/137 (0%)
 Frame = +2

Query: 2    QGLRIAPPEAPTTGYKFGKGVYFADMVSKSAHYCYTDKKNPVGLMLLSEVALGKVYELNK 181
            QGLRIAPPEAP TGY FGKGVYFAD+VSKSA YCYTD+KNPVGLMLLSEVALG+VYEL K
Sbjct: 855  QGLRIAPPEAPATGYMFGKGVYFADLVSKSAQYCYTDRKNPVGLMLLSEVALGEVYELRK 914

Query: 182  DSYMDKPPQGMHSTKGLGKMIPQPSEYVKWRDDVVVPCGKPVSSGVMASQL-YNQYIVYD 358
              YMDKPP+G HSTKGLGK  PQ SEYVKWRD+VVVPCGKPV S V +++L YN+YIVY+
Sbjct: 915  AMYMDKPPEGKHSTKGLGKKKPQDSEYVKWRDEVVVPCGKPVPSNVKSTELMYNEYIVYN 974

Query: 359  TAQVKMQFLLKVRFPHK 409
            TAQVKMQFLLKVRF HK
Sbjct: 975  TAQVKMQFLLKVRFHHK 991


>emb|CBI37089.3| unnamed protein product [Vitis vinifera]
          Length = 996

 Score =  231 bits (590), Expect = 9e-59
 Identities = 112/137 (81%), Positives = 122/137 (89%), Gaps = 1/137 (0%)
 Frame = +2

Query: 2    QGLRIAPPEAPTTGYKFGKGVYFADMVSKSAHYCYTDKKNPVGLMLLSEVALGKVYELNK 181
            QGLRIAPPEAP TGY FGKGVYFAD+VSKSA YCYTD+KNPVGLMLLSEVALG+VYEL K
Sbjct: 859  QGLRIAPPEAPATGYMFGKGVYFADLVSKSAQYCYTDRKNPVGLMLLSEVALGEVYELRK 918

Query: 182  DSYMDKPPQGMHSTKGLGKMIPQPSEYVKWRDDVVVPCGKPVSSGVMASQL-YNQYIVYD 358
              YMDKPP+G HSTKGLGK  PQ SEYVKWRD+VVVPCGKPV S V +++L YN+YIVY+
Sbjct: 919  AMYMDKPPEGKHSTKGLGKKKPQDSEYVKWRDEVVVPCGKPVPSNVKSTELMYNEYIVYN 978

Query: 359  TAQVKMQFLLKVRFPHK 409
            TAQVKMQFLLKVRF HK
Sbjct: 979  TAQVKMQFLLKVRFHHK 995


>ref|XP_002263185.1| PREDICTED: poly [ADP-ribose] polymerase 1-like isoform 1 [Vitis
            vinifera]
          Length = 984

 Score =  231 bits (590), Expect = 9e-59
 Identities = 112/137 (81%), Positives = 122/137 (89%), Gaps = 1/137 (0%)
 Frame = +2

Query: 2    QGLRIAPPEAPTTGYKFGKGVYFADMVSKSAHYCYTDKKNPVGLMLLSEVALGKVYELNK 181
            QGLRIAPPEAP TGY FGKGVYFAD+VSKSA YCYTD+KNPVGLMLLSEVALG+VYEL K
Sbjct: 847  QGLRIAPPEAPATGYMFGKGVYFADLVSKSAQYCYTDRKNPVGLMLLSEVALGEVYELRK 906

Query: 182  DSYMDKPPQGMHSTKGLGKMIPQPSEYVKWRDDVVVPCGKPVSSGVMASQL-YNQYIVYD 358
              YMDKPP+G HSTKGLGK  PQ SEYVKWRD+VVVPCGKPV S V +++L YN+YIVY+
Sbjct: 907  AMYMDKPPEGKHSTKGLGKKKPQDSEYVKWRDEVVVPCGKPVPSNVKSTELMYNEYIVYN 966

Query: 359  TAQVKMQFLLKVRFPHK 409
            TAQVKMQFLLKVRF HK
Sbjct: 967  TAQVKMQFLLKVRFHHK 983


>ref|XP_002521021.1| poly [ADP-ribose] polymerase, putative [Ricinus communis]
            gi|223539858|gb|EEF41438.1| poly [ADP-ribose] polymerase,
            putative [Ricinus communis]
          Length = 982

 Score =  230 bits (586), Expect = 3e-58
 Identities = 110/137 (80%), Positives = 121/137 (88%), Gaps = 1/137 (0%)
 Frame = +2

Query: 2    QGLRIAPPEAPTTGYKFGKGVYFADMVSKSAHYCYTDKKNPVGLMLLSEVALGKVYELNK 181
            QGLRIAPPEAP TGY FGKG+YFAD+VSKSA YCYTDKKNPVGLMLLSEVALG+VYEL  
Sbjct: 845  QGLRIAPPEAPATGYMFGKGIYFADLVSKSAQYCYTDKKNPVGLMLLSEVALGEVYELKN 904

Query: 182  DSYMDKPPQGMHSTKGLGKMIPQPSEYVKWRDDVVVPCGKPVSSGVMASQL-YNQYIVYD 358
              YMDKPP+G HSTKGLGK +PQ SE+VKWRD+V VPCG+PV S V AS+L YN+YIVY+
Sbjct: 905  AMYMDKPPEGKHSTKGLGKKVPQESEFVKWRDEVTVPCGRPVPSKVKASELMYNEYIVYN 964

Query: 359  TAQVKMQFLLKVRFPHK 409
            TAQVKMQFLLKVRF HK
Sbjct: 965  TAQVKMQFLLKVRFRHK 981


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