BLASTX nr result

ID: Coptis24_contig00024195 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024195
         (673 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278133.1| PREDICTED: uncharacterized protein LOC100244...   102   5e-20
ref|XP_002511021.1| conserved hypothetical protein [Ricinus comm...    99   6e-19
ref|XP_002299411.1| predicted protein [Populus trichocarpa] gi|2...    96   5e-18
ref|XP_003555487.1| PREDICTED: uncharacterized protein LOC100805...    96   6e-18
ref|XP_003535470.1| PREDICTED: uncharacterized protein LOC100813...    96   6e-18

>ref|XP_002278133.1| PREDICTED: uncharacterized protein LOC100244287 [Vitis vinifera]
           gi|297744976|emb|CBI38568.3| unnamed protein product
           [Vitis vinifera]
          Length = 148

 Score =  102 bits (255), Expect = 5e-20
 Identities = 49/74 (66%), Positives = 62/74 (83%), Gaps = 1/74 (1%)
 Frame = -3

Query: 479 TTTDELLPVYDPLSEFAKKEKLRMKFAENAVHVIPLVLLVCGLILWVLSNPDVEIN-KDS 303
           + ++E LPVYDP+SE AKKE+ R+KFAENAVHVIP VLL+C +ILWV SNPDV++   + 
Sbjct: 31  SVSNEELPVYDPVSEMAKKERSRIKFAENAVHVIPFVLLLCAIILWVFSNPDVDVGITND 90

Query: 302 SIAARIEGLTIDGD 261
           SIAARI GLT++GD
Sbjct: 91  SIAARIRGLTLEGD 104


>ref|XP_002511021.1| conserved hypothetical protein [Ricinus communis]
           gi|223550136|gb|EEF51623.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 143

 Score = 99.4 bits (246), Expect = 6e-19
 Identities = 52/113 (46%), Positives = 68/113 (60%), Gaps = 1/113 (0%)
 Frame = -3

Query: 590 MHRSSSTTRASEFFLHGXXXXXXXXXXXXXXXXXTLDTTTDELLPVYDPLSEFAKKEKLR 411
           MHRS+S TR  ++F+H                     +     LP  DP+   AKKEK  
Sbjct: 1   MHRSASWTRTDDYFMHSSPKAPPGLRIS--------SSNEANELPEDDPILGMAKKEKSH 52

Query: 410 MKFAENAVHVIPLVLLVCGLILWVLSNPDVEI-NKDSSIAARIEGLTIDGDVE 255
           +KF+ENA+H+IP VLL+CG ILW  SNPDV + NK  SIA+ IEGLTI+GD++
Sbjct: 53  IKFSENAIHIIPFVLLLCGFILWFFSNPDVNVGNKPDSIASSIEGLTIEGDID 105


>ref|XP_002299411.1| predicted protein [Populus trichocarpa] gi|222846669|gb|EEE84216.1|
           predicted protein [Populus trichocarpa]
          Length = 124

 Score = 96.3 bits (238), Expect = 5e-18
 Identities = 55/116 (47%), Positives = 70/116 (60%), Gaps = 4/116 (3%)
 Frame = -3

Query: 590 MHRSSSTTRASE--FFLHGXXXXXXXXXXXXXXXXXTLDTTTDEL--LPVYDPLSEFAKK 423
           MHRS+S  R ++  +F H                     +++ EL  LP YDP+ E A K
Sbjct: 1   MHRSASWNRVADDDYFKHRMADQYYMHSSPNEGTQGMRMSSSIELNQLPAYDPMVELAMK 60

Query: 422 EKLRMKFAENAVHVIPLVLLVCGLILWVLSNPDVEINKDSSIAARIEGLTIDGDVE 255
           EK R KFAENAVH+IP VLL+CGL+LW  SNP   +    SIAARIEGLTI+GD++
Sbjct: 61  EKSRAKFAENAVHIIPFVLLLCGLVLWFFSNP---VRNMDSIAARIEGLTIEGDID 113


>ref|XP_003555487.1| PREDICTED: uncharacterized protein LOC100805238 [Glycine max]
          Length = 142

 Score = 95.9 bits (237), Expect = 6e-18
 Identities = 45/69 (65%), Positives = 58/69 (84%)
 Frame = -3

Query: 461 LPVYDPLSEFAKKEKLRMKFAENAVHVIPLVLLVCGLILWVLSNPDVEINKDSSIAARIE 282
           LP YDP++E AK+E+ R+KFAENAVHVIPLVL+VC +ILW+ SNPDV I  D  I ARIE
Sbjct: 39  LPTYDPIAELAKRERARVKFAENAVHVIPLVLIVCAIILWLFSNPDVGIIGD-PIEARIE 97

Query: 281 GLTIDGDVE 255
           GL+++G++E
Sbjct: 98  GLSLEGEIE 106


>ref|XP_003535470.1| PREDICTED: uncharacterized protein LOC100813926 [Glycine max]
          Length = 142

 Score = 95.9 bits (237), Expect = 6e-18
 Identities = 44/69 (63%), Positives = 58/69 (84%)
 Frame = -3

Query: 461 LPVYDPLSEFAKKEKLRMKFAENAVHVIPLVLLVCGLILWVLSNPDVEINKDSSIAARIE 282
           LP YDP++E AK+E+ R+KFAENAVHVIPLVL++C +ILW+ SNPDV I  D  I ARIE
Sbjct: 39  LPTYDPIAELAKRERARVKFAENAVHVIPLVLIICAIILWLFSNPDVGIIGD-PIGARIE 97

Query: 281 GLTIDGDVE 255
           GL+++G++E
Sbjct: 98  GLSLEGEIE 106


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