BLASTX nr result

ID: Coptis24_contig00024187 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024187
         (486 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283285.2| PREDICTED: uncharacterized protein LOC100252...   117   8e-25
emb|CBI19420.3| unnamed protein product [Vitis vinifera]              117   8e-25
ref|XP_002320699.1| predicted protein [Populus trichocarpa] gi|2...   103   1e-20
ref|XP_003549383.1| PREDICTED: uncharacterized protein LOC100783...   103   1e-20
ref|XP_003545333.1| PREDICTED: uncharacterized protein LOC100795...   101   6e-20

>ref|XP_002283285.2| PREDICTED: uncharacterized protein LOC100252311 [Vitis vinifera]
          Length = 922

 Score =  117 bits (294), Expect = 8e-25
 Identities = 65/126 (51%), Positives = 88/126 (69%), Gaps = 2/126 (1%)
 Frame = +1

Query: 109 MDPNIMKILEDDEDDTMHSGADVDAFTAALNRDIEGDPSSQ--SDTTGLLPHENNSTAKQ 282
           MDP+IMK+LE+DED+TMHSGADV+A TAALNRDIEGD S+   SD+  +L   +N T+ Q
Sbjct: 1   MDPSIMKLLEEDEDETMHSGADVEALTAALNRDIEGDTSTSQPSDSENVLSQGSNHTSSQ 60

Query: 283 SFPQWQVSNQEENVCVQNKEEEVKNSQNQGQTSSEVDMMQQGSGSEIQVQQSGQVREQSH 462
            F QWQ S+Q+EN   Q+ ++E+K+ Q Q   SS+++  Q GSG E Q QQ     + + 
Sbjct: 61  LFSQWQTSSQDENTDSQS-QQELKSLQQQELNSSDLEQKQHGSGVENQ-QQVDASHDINR 118

Query: 463 LQMQQK 480
           L +QQK
Sbjct: 119 LPLQQK 124


>emb|CBI19420.3| unnamed protein product [Vitis vinifera]
          Length = 882

 Score =  117 bits (294), Expect = 8e-25
 Identities = 65/126 (51%), Positives = 88/126 (69%), Gaps = 2/126 (1%)
 Frame = +1

Query: 109 MDPNIMKILEDDEDDTMHSGADVDAFTAALNRDIEGDPSSQ--SDTTGLLPHENNSTAKQ 282
           MDP+IMK+LE+DED+TMHSGADV+A TAALNRDIEGD S+   SD+  +L   +N T+ Q
Sbjct: 1   MDPSIMKLLEEDEDETMHSGADVEALTAALNRDIEGDTSTSQPSDSENVLSQGSNHTSSQ 60

Query: 283 SFPQWQVSNQEENVCVQNKEEEVKNSQNQGQTSSEVDMMQQGSGSEIQVQQSGQVREQSH 462
            F QWQ S+Q+EN   Q+ ++E+K+ Q Q   SS+++  Q GSG E Q QQ     + + 
Sbjct: 61  LFSQWQTSSQDENTDSQS-QQELKSLQQQELNSSDLEQKQHGSGVENQ-QQVDASHDINR 118

Query: 463 LQMQQK 480
           L +QQK
Sbjct: 119 LPLQQK 124


>ref|XP_002320699.1| predicted protein [Populus trichocarpa] gi|222861472|gb|EEE99014.1|
           predicted protein [Populus trichocarpa]
          Length = 875

 Score =  103 bits (258), Expect = 1e-20
 Identities = 59/130 (45%), Positives = 82/130 (63%), Gaps = 6/130 (4%)
 Frame = +1

Query: 109 MDPNIMKILEDDEDDTMHSGADVDAFTAALNRDIEGDPSSQ--SDTTGLLPHENNSTAKQ 282
           MDPNIM++LE+DED+TMHSGADV+AF AALNRDI GD S+   SD++ +L HENN ++ Q
Sbjct: 1   MDPNIMRLLEEDEDETMHSGADVEAFQAALNRDIGGDVSNSQPSDSSAVLCHENNQSSSQ 60

Query: 283 SFPQWQVSNQEENVCVQNKEE----EVKNSQNQGQTSSEVDMMQQGSGSEIQVQQSGQVR 450
            FP    + +  N    N EE     V+   +Q Q +S ++  Q G  +E Q QQ G  +
Sbjct: 61  QFPNRPTAGKIGN--ANNTEELDAKNVQRQHHQEQHTSAMETKQNGPNAENQQQQGGFPQ 118

Query: 451 EQSHLQMQQK 480
           E +H  + +K
Sbjct: 119 EPTHPPLLKK 128


>ref|XP_003549383.1| PREDICTED: uncharacterized protein LOC100783067 [Glycine max]
          Length = 984

 Score =  103 bits (257), Expect = 1e-20
 Identities = 58/128 (45%), Positives = 78/128 (60%), Gaps = 2/128 (1%)
 Frame = +1

Query: 109 MDPNIMKILEDDEDDTMHSGADVDAFTAALNRDIEGDPSSQ--SDTTGLLPHENNSTAKQ 282
           MDP+IMK+LEDDED+ MHSG DV+AF AALNRDI GD S+   S +  +L   +N+T+ Q
Sbjct: 1   MDPSIMKLLEDDEDEAMHSGVDVEAFQAALNRDIGGDVSTSQFSGSDAVLSQGSNNTSSQ 60

Query: 283 SFPQWQVSNQEENVCVQNKEEEVKNSQNQGQTSSEVDMMQQGSGSEIQVQQSGQVREQSH 462
           S  QW  SN +     Q  ++E K +Q Q Q SS V++ Q+GS +E     + Q     H
Sbjct: 61  SLSQWPTSNHDSQTDCQ--KQESKTAQQQDQPSSGVELKQRGSLAEQLHHVASQDINNPH 118

Query: 463 LQMQQKDD 486
           L  +Q  D
Sbjct: 119 LSQKQSQD 126


>ref|XP_003545333.1| PREDICTED: uncharacterized protein LOC100795389 [Glycine max]
          Length = 933

 Score =  101 bits (252), Expect = 6e-20
 Identities = 58/128 (45%), Positives = 76/128 (59%), Gaps = 2/128 (1%)
 Frame = +1

Query: 109 MDPNIMKILEDDEDDTMHSGADVDAFTAALNRDI--EGDPSSQSDTTGLLPHENNSTAKQ 282
           MDP+IMK+LEDDED+TMHSG DV+AF AALNRDI   G  S  S +  +L   +N+ + Q
Sbjct: 1   MDPSIMKLLEDDEDETMHSGVDVEAFQAALNRDIGGAGSTSQFSGSDAVLSQGSNNISSQ 60

Query: 283 SFPQWQVSNQEENVCVQNKEEEVKNSQNQGQTSSEVDMMQQGSGSEIQVQQSGQVREQSH 462
           S  QW  SN +     Q  ++E K +Q Q Q SSEV++ Q GS +E     + Q     H
Sbjct: 61  SLSQWPTSNHDTQTDCQ--KQESKTAQQQEQPSSEVELKQHGSLAEQLQHVASQDINTPH 118

Query: 463 LQMQQKDD 486
           L  +Q  D
Sbjct: 119 LSQKQSQD 126


Top